Table: Gene sets enriched in phenotype 1 (6 samples) [plain text format]

	GS follow link to MSigDB	GS DETAILS	SIZE	ES	NES	NOM p-val	FDR q-val	FWER p-val	RANK AT MAX	LEADING EDGE
1	HALLMARK_HEDGEHOG_SIGNALING	Details ...	27	0.51	1.61	0.015	0.524	0.232	3411	tags=44%, list=19%, signal=54%
2	HALLMARK_PROTEIN_SECRETION	Details ...	91	0.36	1.59	0.010	0.331	0.289	6243	tags=53%, list=34%, signal=79%
3	HALLMARK_MITOTIC_SPINDLE	Details ...	195	0.32	1.44	0.112	0.590	0.517	4843	tags=34%, list=26%, signal=45%
4	HALLMARK_ANDROGEN_RESPONSE	Details ...	82	0.32	1.42	0.018	0.527	0.569	2918	tags=23%, list=16%, signal=27%
5	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION	Details ...	126	0.31	1.31	0.047	0.784	0.789	4391	tags=31%, list=24%, signal=40%
6	HALLMARK_ANGIOGENESIS	Details ...	24	0.41	1.23	0.210	0.965	0.897	1740	tags=33%, list=9%, signal=37%
7	HALLMARK_HYPOXIA	Details ...	159	0.27	1.21	0.146	0.930	0.917	3164	tags=23%, list=17%, signal=28%
8	HALLMARK_ALLOGRAFT_REJECTION	Details ...	147	0.26	1.19	0.192	0.917	0.944	2433	tags=19%, list=13%, signal=22%
9	HALLMARK_PI3K_AKT_MTOR_SIGNALING	Details ...	100	0.25	1.16	0.251	0.920	0.960	4037	tags=29%, list=22%, signal=37%
10	HALLMARK_E2F_TARGETS	Details ...	198	0.33	1.16	0.367	0.840	0.960	5048	tags=37%, list=27%, signal=50%
11	HALLMARK_APOPTOSIS	Details ...	134	0.24	1.10	0.300	0.961	0.988	3878	tags=27%, list=21%, signal=34%
12	HALLMARK_COMPLEMENT	Details ...	151	0.24	1.07	0.348	1.000	0.995	2230	tags=19%, list=12%, signal=22%
13	HALLMARK_COAGULATION	Details ...	90	0.25	1.07	0.305	0.939	0.995	2917	tags=26%, list=16%, signal=30%
14	HALLMARK_ESTROGEN_RESPONSE_EARLY	Details ...	156	0.23	1.06	0.327	0.893	0.995	4223	tags=28%, list=23%, signal=35%
15	HALLMARK_MYOGENESIS	Details ...	132	0.25	1.06	0.358	0.835	0.995	3705	tags=27%, list=20%, signal=34%
16	HALLMARK_G2M_CHECKPOINT	Details ...	194	0.30	1.04	0.458	0.842	0.998	5133	tags=34%, list=28%, signal=46%
17	HALLMARK_MTORC1_SIGNALING	Details ...	191	0.23	1.01	0.436	0.888	0.998	4523	tags=31%, list=25%, signal=41%
18	HALLMARK_UV_RESPONSE_DN	Details ...	127	0.21	0.97	0.478	0.975	1.000	3210	tags=20%, list=17%, signal=24%
19	HALLMARK_IL6_JAK_STAT3_SIGNALING	Details ...	67	0.26	0.94	0.524	1.000	1.000	1912	tags=18%, list=10%, signal=20%
20	HALLMARK_PEROXISOME	Details ...	87	0.20	0.94	0.611	0.977	1.000	1917	tags=14%, list=10%, signal=15%
21	HALLMARK_IL2_STAT5_SIGNALING		182	0.20	0.91	0.643	1.000	1.000	4021	tags=27%, list=22%, signal=34%
22	HALLMARK_P53_PATHWAY		185	0.21	0.89	0.648	1.000	1.000	3724	tags=24%, list=20%, signal=30%
23	HALLMARK_UV_RESPONSE_UP		128	0.22	0.89	0.587	0.984	1.000	1826	tags=13%, list=10%, signal=15%
24	HALLMARK_APICAL_JUNCTION		155	0.20	0.86	0.738	1.000	1.000	4733	tags=30%, list=26%, signal=40%
25	HALLMARK_GLYCOLYSIS		169	0.18	0.86	0.720	0.972	1.000	2918	tags=17%, list=16%, signal=20%
26	HALLMARK_TNFA_SIGNALING_VIA_NFKB		162	0.22	0.84	0.718	0.983	1.000	3934	tags=28%, list=21%, signal=36%
27	HALLMARK_UNFOLDED_PROTEIN_RESPONSE		104	0.21	0.84	0.654	0.959	1.000	4322	tags=28%, list=23%, signal=36%
28	HALLMARK_XENOBIOTIC_METABOLISM		146	0.18	0.82	0.842	0.967	1.000	2621	tags=16%, list=14%, signal=18%
29	HALLMARK_APICAL_SURFACE		33	0.24	0.80	0.732	0.976	1.000	5497	tags=45%, list=30%, signal=65%
30	HALLMARK_FATTY_ACID_METABOLISM		133	0.18	0.80	0.845	0.952	1.000	998	tags=8%, list=5%, signal=9%
31	HALLMARK_CHOLESTEROL_HOMEOSTASIS		62	0.22	0.79	0.821	0.926	1.000	2651	tags=21%, list=14%, signal=24%
32	HALLMARK_ESTROGEN_RESPONSE_LATE		145	0.19	0.75	0.845	0.961	1.000	4501	tags=27%, list=24%, signal=35%
33	HALLMARK_DNA_REPAIR		144	0.18	0.74	0.802	0.953	1.000	2681	tags=17%, list=15%, signal=19%
34	HALLMARK_INTERFERON_GAMMA_RESPONSE		168	0.18	0.72	0.819	0.953	1.000	4283	tags=27%, list=23%, signal=35%
35	HALLMARK_INTERFERON_ALPHA_RESPONSE		90	0.19	0.63	0.870	1.000	1.000	4578	tags=31%, list=25%, signal=41%
36	HALLMARK_MYC_TARGETS_V1		188	0.19	0.57	0.819	0.999	1.000	2856	tags=18%, list=16%, signal=21%
37	HALLMARK_TGF_BETA_SIGNALING		46	0.11	0.49	1.000	0.990	1.000	2711	tags=11%, list=15%, signal=13%