DatasetCLP.Basophil_Pheno.cls
#Group2_versus_Group4.Basophil_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.32850635
Normalized Enrichment Score (NES)1.1556597
Nominal p-value0.36738703
FDR q-value0.83975095
FWER p-Value0.96
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Srsf11900.7140.0078Yes
2Donson2730.6670.0203Yes
3Mcm43440.6380.0328Yes
4Cdkn1b5280.5750.0374Yes
5Tfrc8640.5080.0320Yes
6Msh28860.5040.0437Yes
7Melk10200.4840.0487Yes
8Ssrp110820.4750.0575Yes
9Rpa311740.4600.0643Yes
10Dck12100.4580.0740Yes
11Lmnb112810.4480.0816Yes
12Ncapd214210.4310.0850Yes
13Mcm214380.4290.0951Yes
14Ipo714470.4280.1056Yes
15Rbbp714830.4260.1145Yes
16Prps115620.4170.1209Yes
17Nasp15660.4170.1314Yes
18Trip1316710.4060.1360Yes
19Mcm317740.3950.1405Yes
20Aurkb18400.3870.1468Yes
21Dnmt118710.3840.1550Yes
22Hus118880.3830.1639Yes
23Smc1a19970.3730.1675Yes
24Hells21830.3600.1665Yes
25Pttg122730.3500.1706Yes
26Xpo122880.3490.1787Yes
27Hnrnpd23260.3460.1855Yes
28Ube2t23650.3420.1921Yes
29Prkdc23860.3400.1997Yes
30Timeless24300.3350.2059Yes
31Psmc3ip24510.3330.2133Yes
32Lsm824550.3330.2216Yes
33Gins425260.3270.2262Yes
34Lbr27610.3120.2213Yes
35Paics28580.3040.2238Yes
36Mcm630060.2930.2232Yes
37Asf1a30970.2880.2256Yes
38Top2a32520.2780.2242Yes
39Mcm532760.2760.2300Yes
40Nup20532860.2750.2365Yes
41Pole33600.2710.2394Yes
42Syncrip34070.2680.2438Yes
43Mybl235330.2610.2436Yes
44Nap1l136270.2540.2450Yes
45Rfc136400.2530.2507Yes
46Spc2536500.2520.2567Yes
47Bard136570.2520.2628Yes
48Stmn136770.2500.2681Yes
49Rrm237000.2490.2733Yes
50Rad2137150.2470.2788Yes
51Nup10738110.2400.2797Yes
52Ctcf38280.2390.2849Yes
53Chek238710.2350.2886Yes
54Brca138780.2350.2943Yes
55Pnn38930.2330.2995Yes
56Prim239400.2310.3028Yes
57Smc339470.2300.3084Yes
58Cdkn2c39690.2280.3131Yes
59Lig140830.2230.3126Yes
60Tipin42240.2160.3104Yes
61Ube2s42720.2140.3133Yes
62Atad242740.2140.3187Yes
63Cdca844940.2020.3118Yes
64Spc2445310.1990.3149Yes
65Dlgap546590.1940.3129Yes
66Kif447130.1920.3148Yes
67Cdkn347870.1870.3156Yes
68Bub1b48620.1810.3162Yes
69Chek149190.1780.3176Yes
70Hmgb249450.1760.3208Yes
71Anp32e49640.1750.3243Yes
72Psip149990.1730.3268Yes
73Tmpo50480.1700.3285Yes
74Aurka51330.1660.3281No
75Ppp1r852540.1610.3256No
76Slbp53040.1580.3270No
77Cbx556710.1410.3105No
78Smc657450.1370.3099No
79Ilf358270.1320.3089No
80Brca260770.1190.2982No
81Wee161030.1180.2999No
82Mad2l161670.1150.2994No
83Cks262380.1120.2984No
84Ccp11063330.1060.2959No
85Mcm763450.1060.2980No
86Cdkn2a63650.1050.2996No
87Cse1l64600.1000.2971No
88Eif2s168700.0840.2767No
89Wdr9069760.0790.2730No
90Pds5b69980.0790.2739No
91Exosc871690.0710.2663No
92Pold372590.0670.2632No
93Plk172670.0670.2645No
94Rad51ap173110.0640.2638No
95Brms1l73360.0630.2641No
96Cdk173390.0630.2656No
97Pcna74050.0600.2635No
98Stag174140.0590.2646No
99Ak274380.0580.2648No
100Espl174840.0560.2638No
101Cenpe75870.0510.2594No
102Shmt177070.0460.2541No
103Gspt178050.0410.2498No
104Cdc25a78240.0400.2498No
105Xrcc679210.0360.2455No
106Luc7l379260.0360.2462No
107E2f879330.0360.2467No
108Hmgb379840.0330.2449No
109Kif2279910.0330.2454No
110Tubb580260.0320.2443No
111Mre11a80360.0310.2446No
112Dctpp180480.0310.2448No
113Racgap181580.0250.2395No
114Hmmr81690.0250.2395No
115Rad51c82320.0230.2367No
116Cdk482580.0220.2359No
117Rnaseh2a83250.0190.2328No
118Pa2g484960.0120.2237No
119Mki6785810.0080.2193No
120Ddx39a85910.0080.2190No
121Rad186300.0060.2171No
122Cdc25b86830.0040.2144No
123Gins18885-0.0020.2034No
124Rad509182-0.0140.1875No
125Plk49193-0.0150.1873No
126Asf1b9238-0.0170.1853No
127Diaph39263-0.0180.1844No
128Kif18b9305-0.0200.1827No
129Dut9409-0.0240.1777No
130Pms29435-0.0260.1770No
131Cnot99469-0.0270.1758No
132Ubr79495-0.0280.1752No
133Depdc1a9555-0.0300.1727No
134Nop569669-0.0360.1674No
135Smc49720-0.0380.1656No
136Rfc29785-0.0400.1632No
137Ccne19839-0.0430.1613No
138Tbrg49853-0.0430.1617No
139Nup1539881-0.0450.1614No
140Cit9889-0.0450.1622No
141Rfc39894-0.0450.1631No
142Nudt2110018-0.0510.1576No
143Rpa110059-0.0530.1568No
144Nme110152-0.0570.1532No
145Cks1b10265-0.0620.1486No
146Rpa210322-0.0650.1472No
147Cenpm10477-0.0710.1406No
148Kif2c10523-0.0730.1400No
149Tra2b10707-0.0820.1320No
150Ezh210714-0.0830.1338No
151Pole410780-0.0850.1324No
152Pan210941-0.0920.1260No
153Birc511050-0.0970.1225No
154Ranbp111073-0.0980.1238No
155Mxd311319-0.1070.1131No
156Mthfd211455-0.1130.1085No
157Usp111489-0.1140.1096No
158Mms22l11649-0.1210.1040No
159Zw1011753-0.1250.1015No
160Spag511820-0.1290.1012No
161Cdkn1a11830-0.1300.1040No
162Ung11837-0.1300.1070No
163Pold111838-0.1300.1103No
164Ran11923-0.1330.1091No
165Srsf212059-0.1400.1053No
166Tacc312079-0.1410.1078No
167Nolc112163-0.1450.1070No
168Pola212330-0.1520.1017No
169Tk112403-0.1560.1018No
170Tcf1912502-0.1610.1005No
171Dek12544-0.1630.1024No
172Trp5312773-0.1740.0943No
173Phf5a13443-0.2060.0629No
174H2az113580-0.2120.0608No
175Lyar13789-0.2200.0550No
176Snrpb13823-0.2220.0589No
177Suv39h113835-0.2230.0639No
178Jpt114102-0.2370.0554No
179Ccnb214219-0.2430.0552No
180Dclre1b14371-0.2520.0533No
181Ppm1d14455-0.2560.0553No
182Pop714622-0.2660.0530No
183Mlh114715-0.2710.0548No
184Tubg114724-0.2710.0613No
185Eed14839-0.2770.0621No
186Pold215128-0.2940.0538No
187H2ax15173-0.2960.0590No
188Cdca315437-0.3120.0525No
189Nbn15444-0.3120.0601No
190Ing315582-0.3210.0608No
191Orc615592-0.3220.0685No
192Orc215785-0.3340.0665No
193Cdc2016824-0.4220.0203No
194Myc16870-0.4270.0287No
195Dscc117190-0.4610.0230No
196Hmga1b17412-0.4900.0234No
197Prdx417674-0.5360.0228No
198Gins318146-0.6850.0144No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS