DatasetCLP.Basophil_Pheno.cls
#Group2_versus_Group4.Basophil_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.2973378
Normalized Enrichment Score (NES)1.0434177
Nominal p-value0.458
FDR q-value0.8417267
FWER p-Value0.998
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hspa81310.7720.0128Yes
2Srsf11900.7140.0281Yes
3Hnrnpu2310.6850.0436Yes
4Dmd3150.6460.0558Yes
5Kpnb13720.6290.0690Yes
6Cdkn1b5280.5750.0754Yes
7Amd15290.5750.0903Yes
8Dr15610.5670.1033Yes
9Sap306170.5540.1146Yes
10Rad54l7280.5320.1224Yes
11Atf58100.5180.1313Yes
12Uck29460.4930.1367Yes
13Upf110280.4830.1447Yes
14Lmnb112810.4480.1425Yes
15Mcm214380.4290.1450Yes
16Cdc614870.4250.1534Yes
17Nasp15660.4170.1599Yes
18Mcm317740.3950.1588Yes
19Aurkb18400.3870.1652Yes
20Hus118880.3830.1726Yes
21Smc1a19970.3730.1763Yes
22Odf221100.3640.1796Yes
23Kif1122490.3520.1811Yes
24Sqle22570.3510.1898Yes
25Pttg122730.3500.1981Yes
26Xpo122880.3490.2063Yes
27Hnrnpd23260.3460.2133Yes
28Sfpq23980.3380.2181Yes
29Tent4a27500.3130.2070Yes
30Lbr27610.3120.2145Yes
31Chmp1a29120.3000.2140Yes
32Numa129320.2980.2207Yes
33Mcm630060.2930.2243Yes
34H2bc1230460.2900.2297Yes
35Efna531460.2830.2316Yes
36Cul531470.2830.2389Yes
37Top2a32520.2780.2404Yes
38Mcm532760.2760.2463Yes
39Nsd233450.2720.2496Yes
40Chaf1a33580.2710.2560Yes
41Pole33600.2710.2629Yes
42Incenp33720.2710.2693Yes
43Syncrip34070.2680.2744Yes
44Mybl235330.2610.2743Yes
45Bard136570.2520.2741Yes
46Stmn136770.2500.2795Yes
47Rad2137150.2470.2839Yes
48Ctcf38280.2390.2839Yes
49Prim239400.2310.2838Yes
50Cdkn2c39690.2280.2882Yes
51Ube2s42720.2140.2771Yes
52Cenpf43390.2100.2790Yes
53Tnpo245070.2010.2750Yes
54Kif1545200.2000.2795Yes
55Kif447130.1920.2739Yes
56Bub147210.1910.2785Yes
57Cdkn347870.1870.2797Yes
58Hira48420.1830.2815Yes
59Pafah1b148430.1820.2862Yes
60Chek149190.1780.2867Yes
61Cul349380.1770.2903Yes
62Tmpo50480.1700.2887Yes
63E2f150530.1700.2929Yes
64Srsf1050730.1690.2963Yes
65Aurka51330.1660.2973Yes
66Hif1a53350.1560.2903No
67Prpf4b56300.1430.2779No
68Ndc8056700.1410.2794No
69Cenpa56960.1390.2816No
70Ilf358270.1320.2779No
71Cdc758790.1300.2785No
72Pbk58960.1290.2810No
73Kif20b59700.1250.2802No
74Notch260140.1230.2810No
75Brca260770.1190.2807No
76Kif5b61530.1150.2796No
77Mad2l161670.1150.2818No
78E2f461890.1140.2836No
79Cks262380.1120.2839No
80Mtf263200.1070.2822No
81Tfdp164640.1000.2769No
82Abl165080.0980.2771No
83Ss1865550.0960.2771No
84Ncl66860.0930.2723No
85E2f368030.0880.2682No
86Top168820.0840.2661No
87Cul168830.0840.2683No
88Pds5b69980.0790.2641No
89Ewsr170430.0770.2636No
90Rad23b71340.0730.2606No
91Nup9871500.0720.2616No
92Smc271670.0710.2626No
93Ccnd171750.0710.2641No
94Arid4a71920.0710.2650No
95Cdc2772430.0680.2640No
96Plk172670.0670.2645No
97Map3k2073130.0640.2637No
98Cdk173390.0630.2640No
99Stag174140.0590.2614No
100Espl174840.0560.2591No
101Nek275130.0540.2590No
102Cenpe75870.0510.2563No
103Tle376810.0460.2524No
104Exo177730.0430.2485No
105Smad377860.0420.2489No
106Gspt178050.0410.2490No
107Cdc25a78240.0400.2490No
108Hmgb379840.0330.2411No
109Kif2279910.0330.2417No
110Smarcc180330.0310.2402No
111Racgap181580.0250.2341No
112Hmmr81690.0250.2342No
113E2f282520.0220.2302No
114Cdk482580.0220.2305No
115Nusap183210.0190.2276No
116Wrn83530.0170.2264No
117Tpx283850.0160.2251No
118Polq84380.0140.2226No
119Mki6785810.0080.2150No
120Atrx85830.0080.2152No
121Prc185870.0080.2152No
122Ddx39a85910.0080.2152No
123Cdc25b86830.0040.2103No
124Meis287920.0000.2044No
125Ccnf8921-0.0030.1975No
126Prmt59053-0.0100.1905No
127Plk49193-0.0150.1833No
128Slc12a29206-0.0150.1830No
129Odc19362-0.0220.1751No
130Kmt5a9432-0.0250.1720No
131Ythdc19436-0.0260.1725No
132Slc38a19493-0.0280.1701No
133Smc49720-0.0380.1587No
134Gins29731-0.0380.1591No
135Dtymk9804-0.0410.1562No
136Nup509877-0.0450.1534No
137Bcl310159-0.0570.1395No
138Cks1b10265-0.0620.1353No
139Rpa210322-0.0650.1340No
140Kif2c10523-0.0730.1249No
141Rasal210529-0.0730.1265No
142Ube2c10556-0.0750.1270No
143Tra2b10707-0.0820.1209No
144Ezh210714-0.0830.1227No
145Ttk10838-0.0880.1182No
146Ccna210848-0.0880.1200No
147Bub310933-0.0920.1178No
148Birc511050-0.0970.1139No
149Ccnt111249-0.1050.1058No
150Slc7a511408-0.1110.1000No
151Fancc11498-0.1140.0980No
152Kif2311708-0.1240.0898No
153Cdc4511754-0.1250.0905No
154Rbl111783-0.1270.0923No
155Mnat111816-0.1290.0939No
156Cbx111895-0.1320.0930No
157Mapk1411912-0.1330.0956No
158Dbf411936-0.1340.0978No
159Srsf212059-0.1400.0947No
160Tacc312079-0.1410.0973No
161G3bp112082-0.1410.1009No
162Knl112123-0.1430.1024No
163Rps6ka512157-0.1440.1043No
164Nolc112163-0.1450.1078No
165Pola212330-0.1520.1026No
166Casp8ap212586-0.1640.0928No
167Egf12794-0.1750.0860No
168Meis112804-0.1760.0901No
169H2az113580-0.2120.0530No
170Snrpd113816-0.2210.0459No
171Stil13832-0.2220.0508No
172Suv39h113835-0.2230.0565No
173Foxn313928-0.2280.0573No
174Cul4a13997-0.2320.0596No
175Fbxo514042-0.2340.0632No
176Tgfb114083-0.2360.0671No
177Lig314090-0.2360.0729No
178Jpt114102-0.2370.0784No
179Katna114181-0.2400.0804No
180Ccnb214219-0.2430.0846No
181Dkc114346-0.2500.0842No
182Pml14653-0.2680.0743No
183Slc7a115017-0.2880.0619No
184H2ax15173-0.2960.0610No
185Orc515440-0.3120.0545No
186Orc615592-0.3220.0546No
187Troap15604-0.3230.0623No
188Pura15770-0.3340.0619No
189Marcks16246-0.3690.0454No
190Cdc2016824-0.4220.0246No
191Myc16870-0.4270.0332No
192Hmga1b17412-0.4900.0162No
193H2az218132-0.677-0.0057No
194Traip18291-0.8050.0064No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT