Table: Gene sets enriched in phenotype 2 (6 samples) [plain text format]

	GS follow link to MSigDB	GS DETAILS	SIZE	ES	NES	NOM p-val	FDR q-val	FWER p-val	RANK AT MAX	LEADING EDGE
1	HALLMARK_CHOLESTEROL_HOMEOSTASIS	Details ...	69	-0.54	-1.59	0.032	0.972	0.376	5128	tags=42%, list=19%, signal=51%
2	HALLMARK_BILE_ACID_METABOLISM	Details ...	104	-0.35	-1.49	0.018	0.881	0.547	3621	tags=23%, list=13%, signal=26%
3	HALLMARK_ALLOGRAFT_REJECTION	Details ...	168	-0.36	-1.34	0.142	1.000	0.823	7655	tags=41%, list=28%, signal=56%
4	HALLMARK_COMPLEMENT	Details ...	175	-0.30	-1.31	0.074	1.000	0.860	5401	tags=27%, list=20%, signal=33%
5	HALLMARK_INFLAMMATORY_RESPONSE	Details ...	177	-0.31	-1.27	0.105	1.000	0.897	5784	tags=29%, list=21%, signal=37%
6	HALLMARK_UV_RESPONSE_DN	Details ...	140	-0.32	-1.24	0.205	1.000	0.916	6018	tags=28%, list=22%, signal=35%
7	HALLMARK_XENOBIOTIC_METABOLISM	Details ...	177	-0.29	-1.22	0.200	0.949	0.931	8708	tags=42%, list=32%, signal=62%
8	HALLMARK_KRAS_SIGNALING_UP	Details ...	185	-0.27	-1.22	0.095	0.846	0.939	7085	tags=37%, list=26%, signal=50%
9	HALLMARK_IL2_STAT5_SIGNALING	Details ...	194	-0.31	-1.20	0.223	0.799	0.944	2735	tags=19%, list=10%, signal=20%
10	HALLMARK_APICAL_JUNCTION	Details ...	184	-0.29	-1.17	0.212	0.824	0.965	4962	tags=26%, list=18%, signal=32%
11	HALLMARK_ESTROGEN_RESPONSE_LATE	Details ...	174	-0.27	-1.16	0.212	0.762	0.968	5449	tags=26%, list=20%, signal=33%
12	HALLMARK_KRAS_SIGNALING_DN	Details ...	143	-0.27	-1.13	0.193	0.784	0.977	4611	tags=24%, list=17%, signal=28%
13	HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY	Details ...	48	-0.36	-1.13	0.324	0.733	0.977	4482	tags=23%, list=16%, signal=27%
14	HALLMARK_IL6_JAK_STAT3_SIGNALING	Details ...	77	-0.33	-1.12	0.297	0.687	0.978	9157	tags=51%, list=33%, signal=76%
15	HALLMARK_COAGULATION	Details ...	121	-0.28	-1.10	0.267	0.693	0.980	8615	tags=40%, list=31%, signal=59%
16	HALLMARK_ESTROGEN_RESPONSE_EARLY	Details ...	181	-0.26	-1.07	0.317	0.725	0.987	9000	tags=43%, list=33%, signal=64%
17	HALLMARK_ANDROGEN_RESPONSE	Details ...	93	-0.26	-1.02	0.462	0.786	0.995	7655	tags=31%, list=28%, signal=43%
18	HALLMARK_PEROXISOME	Details ...	97	-0.21	-1.00	0.455	0.785	0.996	3621	tags=12%, list=13%, signal=14%
19	HALLMARK_HYPOXIA	Details ...	178	-0.26	-0.95	0.523	0.876	0.999	5100	tags=24%, list=18%, signal=29%
20	HALLMARK_APOPTOSIS	Details ...	155	-0.21	-0.94	0.543	0.847	0.999	7813	tags=32%, list=28%, signal=45%
21	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION		171	-0.23	-0.94	0.613	0.813	0.999	8490	tags=36%, list=31%, signal=52%
22	HALLMARK_TNFA_SIGNALING_VIA_NFKB		181	-0.26	-0.92	0.545	0.823	0.999	7071	tags=31%, list=26%, signal=42%
23	HALLMARK_GLYCOLYSIS		188	-0.20	-0.88	0.642	0.874	0.999	6715	tags=27%, list=24%, signal=35%
24	HALLMARK_MYOGENESIS		178	-0.21	-0.87	0.749	0.852	0.999	6855	tags=29%, list=25%, signal=38%
25	HALLMARK_P53_PATHWAY		196	-0.21	-0.87	0.635	0.820	0.999	7876	tags=35%, list=29%, signal=49%
26	HALLMARK_NOTCH_SIGNALING		29	-0.27	-0.86	0.673	0.802	0.999	4581	tags=24%, list=17%, signal=29%
27	HALLMARK_TGF_BETA_SIGNALING		52	-0.25	-0.82	0.669	0.837	0.999	4819	tags=21%, list=17%, signal=26%
28	HALLMARK_APICAL_SURFACE		40	-0.25	-0.81	0.743	0.829	0.999	4930	tags=28%, list=18%, signal=33%
29	HALLMARK_WNT_BETA_CATENIN_SIGNALING		38	-0.23	-0.79	0.734	0.840	1.000	5410	tags=18%, list=20%, signal=23%
30	HALLMARK_HEDGEHOG_SIGNALING		33	-0.21	-0.61	0.898	1.000	1.000	5875	tags=24%, list=21%, signal=31%
31	HALLMARK_DNA_REPAIR		146	-0.14	-0.59	0.827	0.994	1.000	7888	tags=25%, list=29%, signal=34%
32	HALLMARK_MTORC1_SIGNALING		194	-0.17	-0.58	0.838	0.966	1.000	4556	tags=16%, list=17%, signal=20%
33	HALLMARK_OXIDATIVE_PHOSPHORYLATION		182	-0.16	-0.48	0.822	0.974	1.000	10214	tags=37%, list=37%, signal=59%