Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group2_versus_Group3.MEP.ery_Pheno.cls #Group2_versus_Group3_repos
Phenotype	MEP.ery_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	-0.256378
Normalized Enrichment Score (NES)	-0.94705546
Nominal p-value	0.5226824
FDR q-value	0.8764044
FWER p-Value	0.999

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Fos	170	0.787	0.0107	No
2	Has1	190	0.772	0.0267	No
3	Srpx	474	0.639	0.0301	No
4	Phkg1	648	0.590	0.0365	No
5	Map3k1	693	0.580	0.0474	No
6	Stc1	699	0.580	0.0597	No
7	Plin2	925	0.542	0.0631	No
8	Gpc4	977	0.533	0.0727	No
9	Sap30	1346	0.493	0.0699	No
10	Irs2	1416	0.484	0.0778	No
11	Hdlbp	1777	0.443	0.0742	No
12	Ppp1r15a	1984	0.427	0.0759	No
13	B4galnt2	2076	0.420	0.0816	No
14	Tgm2	2085	0.419	0.0903	No
15	Tgfbi	2216	0.407	0.0944	No
16	Errfi1	2244	0.405	0.1021	No
17	Nfil3	2351	0.397	0.1068	No
18	Jun	2454	0.390	0.1115	No
19	Pdgfb	2525	0.386	0.1172	No
20	Ero1a	2638	0.380	0.1213	No
21	Noct	3049	0.354	0.1140	No
22	Pgk1	3316	0.339	0.1116	No
23	Aldob	3609	0.324	0.1079	No
24	Efna3	3802	0.318	0.1077	No
25	Bgn	4094	0.301	0.1036	No
26	Tnfaip3	4518	0.279	0.0942	No
27	Ampd3	4531	0.278	0.0997	No
28	Tktl1	4859	0.266	0.0935	No
29	Pim1	4871	0.266	0.0989	No
30	Ddit4	5056	0.257	0.0977	No
31	P4ha1	5092	0.255	0.1019	No
32	Rragd	5714	0.230	0.0842	No
33	Myh9	6200	0.213	0.0711	No
34	Gck	6354	0.208	0.0700	No
35	Kdelr3	6572	0.201	0.0664	No
36	Hk1	6636	0.198	0.0684	No
37	Pfkl	6756	0.193	0.0682	No
38	Col5a1	6841	0.190	0.0692	No
39	P4ha2	6930	0.186	0.0700	No
40	Cdkn1b	7048	0.181	0.0697	No
41	Ext1	7117	0.179	0.0710	No
42	Xpnpep1	7191	0.176	0.0721	No
43	Jmjd6	7192	0.176	0.0759	No
44	Foxo3	7753	0.158	0.0589	No
45	Egfr	7790	0.157	0.0610	No
46	Hs3st1	7921	0.153	0.0595	No
47	Gpc3	8139	0.145	0.0547	No
48	Mxi1	8289	0.140	0.0523	No
49	Casp6	8426	0.140	0.0504	No
50	Vhl	8463	0.138	0.0520	No
51	Gpc1	8807	0.127	0.0423	No
52	Stbd1	8913	0.124	0.0411	No
53	Atf3	10021	0.089	0.0027	No
54	Vegfa	10030	0.089	0.0043	No
55	Fam162a	10190	0.084	0.0003	No
56	Pdk1	10698	0.068	-0.0167	No
57	Hspa5	10760	0.066	-0.0175	No
58	Isg20	10810	0.064	-0.0179	No
59	Eno1b	10834	0.064	-0.0174	No
60	Cp	10852	0.063	-0.0167	No
61	Rbpj	10913	0.061	-0.0175	No
62	Gpi1	11125	0.055	-0.0240	No
63	Ldhc	11245	0.051	-0.0273	No
64	Pgam2	11441	0.045	-0.0334	No
65	Pklr	11673	0.038	-0.0410	No
66	Rora	11851	0.033	-0.0468	No
67	Klhl24	11940	0.030	-0.0493	No
68	Ankzf1	12042	0.028	-0.0524	No
69	Zfp292	12076	0.026	-0.0531	No
70	Pkp1	12285	0.020	-0.0602	No
71	Dusp1	12425	0.016	-0.0649	No
72	Ak4	12467	0.015	-0.0661	No
73	Kdm3a	12482	0.015	-0.0663	No
74	Ndst2	12529	0.014	-0.0677	No
75	Ier3	12716	0.008	-0.0743	No
76	Csrp2	12770	0.007	-0.0761	No
77	Ids	12804	0.006	-0.0771	No
78	Eno3	12823	0.006	-0.0777	No
79	Bhlhe40	13721	-0.016	-0.1100	No
80	Tpst2	14534	-0.039	-0.1388	No
81	Nr3c1	14541	-0.039	-0.1382	No
82	Wsb1	14691	-0.044	-0.1427	No
83	Slc2a3	14832	-0.048	-0.1467	No
84	Eno2	15019	-0.053	-0.1524	No
85	Vldlr	15031	-0.054	-0.1516	No
86	Selenbp1	15038	-0.054	-0.1507	No
87	Ddit3	15074	-0.055	-0.1508	No
88	Tpi1	15309	-0.062	-0.1580	No
89	Slc2a5	15406	-0.064	-0.1601	No
90	Pygm	15494	-0.067	-0.1618	No
91	Tgfb3	15523	-0.068	-0.1614	No
92	Gapdhs	15630	-0.071	-0.1637	No
93	Klf6	15908	-0.079	-0.1721	No
94	Gbe1	15917	-0.080	-0.1707	No
95	Slc6a6	15921	-0.080	-0.1690	No
96	Bnip3l	16105	-0.087	-0.1738	No
97	Grhpr	16312	-0.092	-0.1794	No
98	Hk2	16388	-0.095	-0.1801	No
99	Slc37a4	16669	-0.102	-0.1881	No
100	Atp7a	16705	-0.103	-0.1872	No
101	Plaur	16948	-0.111	-0.1936	No
102	Sdc4	17055	-0.115	-0.1950	No
103	Ppfia4	17093	-0.116	-0.1938	No
104	Cdkn1c	17323	-0.123	-0.1995	No
105	Kif5a	17355	-0.124	-0.1980	No
106	Cav1	17424	-0.127	-0.1978	No
107	Tiparp	17703	-0.136	-0.2050	No
108	Fbp1	17719	-0.136	-0.2026	No
109	Maff	17752	-0.137	-0.2008	No
110	F3	17969	-0.143	-0.2056	No
111	Klf7	17997	-0.144	-0.2035	No
112	Car12	18182	-0.149	-0.2070	No
113	Scarb1	18231	-0.151	-0.2055	No
114	Cdkn1a	18617	-0.164	-0.2160	No
115	Nedd4l	19079	-0.179	-0.2290	No
116	Cxcr4	19200	-0.182	-0.2294	No
117	Serpine1	19224	-0.183	-0.2263	No
118	Mt1	19392	-0.188	-0.2283	No
119	Tmem45a	19584	-0.194	-0.2311	No
120	Dtna	19642	-0.196	-0.2290	No
121	Pfkp	19666	-0.197	-0.2256	No
122	Aldoa	19817	-0.203	-0.2266	No
123	Sdc3	19975	-0.209	-0.2279	No
124	Zfp36	20033	-0.211	-0.2254	No
125	Aldoc	20072	-0.212	-0.2222	No
126	Pdk3	20141	-0.215	-0.2201	No
127	Btg1	20278	-0.218	-0.2204	No
128	Hmox1	20437	-0.224	-0.2213	No
129	Ets1	21008	-0.244	-0.2368	No
130	Cavin3	21203	-0.252	-0.2385	No
131	Tpd52	21218	-0.253	-0.2335	No
132	Ugp2	21583	-0.268	-0.2410	No
133	Large1	21614	-0.269	-0.2364	No
134	Stc2	22011	-0.286	-0.2446	No
135	Slc25a1	22021	-0.286	-0.2388	No
136	Gaa	22504	-0.306	-0.2498	Yes
137	Ccn5	22556	-0.308	-0.2450	Yes
138	Pnrc1	22707	-0.314	-0.2437	Yes
139	Gys1	22726	-0.315	-0.2376	Yes
140	Mif	22844	-0.320	-0.2350	Yes
141	Tes	23048	-0.329	-0.2353	Yes
142	Ilvbl	23375	-0.344	-0.2398	Yes
143	Pgm2	23394	-0.345	-0.2330	Yes
144	Fosl2	23625	-0.357	-0.2337	Yes
145	Angptl4	24113	-0.383	-0.2432	Yes
146	B3galt6	24133	-0.385	-0.2357	Yes
147	Pgm1	24352	-0.397	-0.2351	Yes
148	Pam	24390	-0.400	-0.2278	Yes
149	Plac8	24561	-0.412	-0.2251	Yes
150	Ndst1	24602	-0.414	-0.2177	Yes
151	Pfkfb3	24659	-0.417	-0.2108	Yes
152	Prdx5	24683	-0.417	-0.2026	Yes
153	Akap12	24699	-0.419	-0.1942	Yes
154	Pck1	24730	-0.420	-0.1862	Yes
155	Ldha	24807	-0.423	-0.1799	Yes
156	Siah2	24842	-0.424	-0.1720	Yes
157	Cavin1	25002	-0.435	-0.1684	Yes
158	Prkca	25442	-0.468	-0.1744	Yes
159	Ccng2	25508	-0.473	-0.1666	Yes
160	Adora2b	25513	-0.473	-0.1565	Yes
161	Lxn	25670	-0.487	-0.1518	Yes
162	S100a4	25722	-0.492	-0.1430	Yes
163	Hexa	25779	-0.496	-0.1344	Yes
164	Sdc2	25786	-0.496	-0.1239	Yes
165	Glrx	25831	-0.501	-0.1148	Yes
166	Slc2a1	25949	-0.511	-0.1080	Yes
167	Nagk	26058	-0.524	-0.1007	Yes
168	Ndrg1	26117	-0.530	-0.0914	Yes
169	Gcnt2	26124	-0.530	-0.0802	Yes
170	Il6	26377	-0.563	-0.0773	Yes
171	Galk1	26427	-0.569	-0.0668	Yes
172	Anxa2	26449	-0.573	-0.0553	Yes
173	Chst3	26512	-0.582	-0.0450	Yes
174	Bcl2	26560	-0.589	-0.0340	Yes
175	Dcn	26802	-0.628	-0.0293	Yes
176	Cited2	27110	-0.705	-0.0253	Yes
177	Sult2b1	27361	-0.806	-0.0171	Yes
178	Ppargc1a	27586	-1.202	0.0006	Yes