Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group2_versus_Group3.MEP.ery_Pheno.cls #Group2_versus_Group3_repos
Phenotype	MEP.ery_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.35891005
Normalized Enrichment Score (NES)	-1.3378677
Nominal p-value	0.14202334
FDR q-value	1.0
FWER p-Value	0.823

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Thy1	80	0.897	0.0159	No
2	Tgfb2	470	0.641	0.0151	No
3	Irf7	649	0.590	0.0210	No
4	Nos2	736	0.575	0.0299	No
5	Il4	1232	0.501	0.0224	No
6	Stat1	1533	0.468	0.0213	No
7	Akt1	1693	0.447	0.0249	No
8	Cd79a	2005	0.425	0.0224	No
9	Rpl3l	2006	0.425	0.0314	No
10	Prf1	2127	0.416	0.0357	No
11	Dyrk3	2179	0.410	0.0424	No
12	Tlr3	2190	0.409	0.0506	No
13	Ccr2	2290	0.402	0.0554	No
14	Eif3a	2460	0.390	0.0575	No
15	Apbb1	2511	0.386	0.0637	No
16	Brca1	2530	0.386	0.0712	No
17	Il2ra	2876	0.364	0.0662	No
18	Cd86	3887	0.313	0.0360	No
19	Mmp9	4118	0.299	0.0339	No
20	Abce1	4395	0.286	0.0298	No
21	Gcnt1	4852	0.267	0.0188	No
22	Socs1	4869	0.266	0.0238	No
23	Mrpl3	4937	0.262	0.0268	No
24	Ube2n	5576	0.235	0.0085	No
25	Ccnd3	5612	0.233	0.0121	No
26	Eif3j1	5875	0.224	0.0072	No
27	Ache	6623	0.199	-0.0158	No
28	Cd3d	6885	0.188	-0.0214	No
29	Egfr	7790	0.157	-0.0510	No
30	Bcat1	8004	0.150	-0.0557	No
31	Nck1	8033	0.149	-0.0536	No
32	Il2	8537	0.136	-0.0691	No
33	Cd2	8749	0.130	-0.0740	No
34	Ptpn6	8813	0.127	-0.0737	No
35	H2-Aa	8860	0.126	-0.0727	No
36	Eif3d	8944	0.123	-0.0731	No
37	Nlrp3	9043	0.120	-0.0742	No
38	Jak2	9176	0.116	-0.0766	No
39	Abi1	9289	0.112	-0.0783	No
40	Cd4	9399	0.109	-0.0800	No
41	Timp1	9682	0.100	-0.0882	No
42	Il2rb	10338	0.080	-0.1104	No
43	Csf1	10453	0.077	-0.1129	No
44	Npm1	10870	0.063	-0.1268	No
45	Fcgr2b	10926	0.061	-0.1275	No
46	Tlr6	10938	0.061	-0.1266	No
47	Wars1	11514	0.043	-0.1467	No
48	Crtam	11756	0.036	-0.1547	No
49	Traf2	11911	0.031	-0.1597	No
50	Eif4g3	11923	0.030	-0.1595	No
51	Tlr1	12360	0.018	-0.1750	No
52	Ikbkb	12365	0.018	-0.1748	No
53	Psmb10	12517	0.014	-0.1800	No
54	Map3k7	12867	0.004	-0.1926	No
55	Cd47	12992	0.000	-0.1971	No
56	Cd40lg	13017	0.000	-0.1980	No
57	Prkcg	13202	-0.001	-0.2047	No
58	Rpl9	13514	-0.011	-0.2158	No
59	Mtif2	13762	-0.018	-0.2244	No
60	Bcl3	13850	-0.020	-0.2272	No
61	Rps3a1	13871	-0.021	-0.2275	No
62	Fgr	13873	-0.021	-0.2271	No
63	Acvr2a	14157	-0.028	-0.2368	No
64	Tapbp	14271	-0.032	-0.2402	No
65	Fasl	14480	-0.037	-0.2470	No
66	Il7	14894	-0.050	-0.2610	No
67	Galnt1	15110	-0.056	-0.2677	No
68	Cd3g	15129	-0.057	-0.2672	No
69	Irf8	15207	-0.059	-0.2688	No
70	Igsf6	15258	-0.061	-0.2693	No
71	F2	15266	-0.061	-0.2683	No
72	Nme1	15783	-0.076	-0.2855	No
73	Pf4	15821	-0.077	-0.2852	No
74	Rps9	16084	-0.086	-0.2930	No
75	Socs5	16307	-0.092	-0.2991	No
76	Was	16428	-0.096	-0.3015	No
77	Gzmb	16449	-0.096	-0.3002	No
78	Itk	16678	-0.102	-0.3064	No
79	Lck	16824	-0.107	-0.3094	No
80	Glmn	17133	-0.117	-0.3182	No
81	Rpl39-ps	17195	-0.119	-0.3179	No
82	Cd40	17197	-0.120	-0.3155	No
83	Il4ra	17285	-0.121	-0.3161	No
84	Il15	17541	-0.130	-0.3227	No
85	Bcl10	17579	-0.131	-0.3212	No
86	Hif1a	17641	-0.134	-0.3207	No
87	Cd80	17716	-0.136	-0.3205	No
88	Ube2d1	18183	-0.149	-0.3344	No
89	Lif	18211	-0.150	-0.3322	No
90	Ripk2	18329	-0.155	-0.3332	No
91	Stab1	18490	-0.160	-0.3357	No
92	Tlr2	18647	-0.165	-0.3379	No
93	Cd7	18863	-0.171	-0.3422	No
94	Ccnd2	18897	-0.172	-0.3398	No
95	Ccl5	18958	-0.174	-0.3383	No
96	H2-DMb2	19080	-0.179	-0.3390	No
97	Il11	19117	-0.180	-0.3365	No
98	Il10	19219	-0.183	-0.3364	No
99	Cdkn2a	19455	-0.190	-0.3409	No
100	B2m	19949	-0.208	-0.3545	Yes
101	Csk	19965	-0.209	-0.3507	Yes
102	Eif5a	20044	-0.211	-0.3491	Yes
103	Ereg	20172	-0.216	-0.3492	Yes
104	Gpr65	20409	-0.223	-0.3532	Yes
105	Ccr1	20448	-0.225	-0.3498	Yes
106	Ctss	20519	-0.227	-0.3476	Yes
107	Ccr5	20702	-0.231	-0.3494	Yes
108	Tnf	20837	-0.237	-0.3493	Yes
109	Hcls1	20915	-0.241	-0.3471	Yes
110	Map4k1	20934	-0.241	-0.3427	Yes
111	Ets1	21008	-0.244	-0.3402	Yes
112	Ly86	21048	-0.247	-0.3365	Yes
113	Tap2	21166	-0.251	-0.3355	Yes
114	Tpd52	21218	-0.253	-0.3320	Yes
115	Ncr1	21376	-0.260	-0.3323	Yes
116	Hdac9	21448	-0.263	-0.3294	Yes
117	Cd3e	21748	-0.274	-0.3345	Yes
118	Il1b	22042	-0.287	-0.3392	Yes
119	Elane	22201	-0.294	-0.3388	Yes
120	Ifnar2	22568	-0.308	-0.3457	Yes
121	Degs1	22577	-0.309	-0.3395	Yes
122	Tap1	22656	-0.312	-0.3358	Yes
123	Cd247	22662	-0.312	-0.3294	Yes
124	Il27ra	22828	-0.319	-0.3287	Yes
125	Fas	22998	-0.327	-0.3281	Yes
126	Icam1	23118	-0.332	-0.3254	Yes
127	Flna	23276	-0.338	-0.3241	Yes
128	Stat4	23300	-0.339	-0.3178	Yes
129	Ifngr2	23471	-0.349	-0.3167	Yes
130	Irf4	23480	-0.350	-0.3096	Yes
131	Il18rap	23500	-0.351	-0.3030	Yes
132	Ifngr1	23708	-0.362	-0.3029	Yes
133	Cfp	23788	-0.366	-0.2981	Yes
134	H2-Oa	24073	-0.381	-0.3005	Yes
135	Icosl	24592	-0.414	-0.3107	Yes
136	St8sia4	24597	-0.414	-0.3022	Yes
137	Il18	24978	-0.433	-0.3069	Yes
138	Cd28	25001	-0.435	-0.2986	Yes
139	Prkcb	25282	-0.456	-0.2993	Yes
140	F2r	25354	-0.461	-0.2922	Yes
141	Ly75	25454	-0.468	-0.2860	Yes
142	Itgal	25652	-0.485	-0.2830	Yes
143	Lcp2	25662	-0.486	-0.2731	Yes
144	Ptprc	25767	-0.494	-0.2666	Yes
145	H2-DMa	25817	-0.500	-0.2579	Yes
146	Ncf4	25819	-0.500	-0.2474	Yes
147	Il2rg	25900	-0.507	-0.2397	Yes
148	Spi1	25912	-0.509	-0.2295	Yes
149	Il12a	25937	-0.510	-0.2196	Yes
150	Cd1d2	26175	-0.536	-0.2170	Yes
151	Il12rb1	26209	-0.540	-0.2069	Yes
152	Klrd1	26356	-0.560	-0.2005	Yes
153	Il6	26377	-0.563	-0.1894	Yes
154	Srgn	26475	-0.577	-0.1808	Yes
155	Trat1	26528	-0.585	-0.1705	Yes
156	Lyn	26533	-0.585	-0.1584	Yes
157	Itgb2	26574	-0.591	-0.1474	Yes
158	Tgfb1	26704	-0.611	-0.1393	Yes
159	Inhba	26907	-0.651	-0.1330	Yes
160	Il16	27036	-0.682	-0.1234	Yes
161	Elf4	27052	-0.687	-0.1095	Yes
162	Ltb	27229	-0.744	-0.1004	Yes
163	Capg	27281	-0.768	-0.0861	Yes
164	H2-Ob	27285	-0.771	-0.0701	Yes
165	C2	27299	-0.774	-0.0543	Yes
166	Cd74	27309	-0.776	-0.0384	Yes
167	Zap70	27492	-0.921	-0.0257	Yes
168	Cd96	27598	-1.415	0.0001	Yes