Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group2_versus_Group3.MEP.ery_Pheno.cls #Group2_versus_Group3_repos
Phenotype	MEP.ery_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.2980121
Normalized Enrichment Score (NES)	-1.311843
Nominal p-value	0.074226804
FDR q-value	1.0
FWER p-Value	0.86

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hspa1a	113	0.848	0.0156	No
2	F7	284	0.712	0.0259	No
3	Zfpm2	496	0.633	0.0330	No
4	Cd36	514	0.627	0.0469	No
5	Irf7	649	0.590	0.0558	No
6	Cdk5r1	860	0.555	0.0610	No
7	Ltf	1286	0.497	0.0571	No
8	C1qc	1303	0.495	0.0680	No
9	Fn1	1591	0.459	0.0682	No
10	Pik3r5	2349	0.397	0.0499	No
11	Notch4	2399	0.395	0.0573	No
12	Pdgfb	2525	0.386	0.0617	No
13	Brpf3	2596	0.382	0.0680	No
14	F8	2749	0.372	0.0711	No
15	Clu	3662	0.323	0.0454	No
16	Vcpip1	4152	0.298	0.0345	No
17	F5	4342	0.288	0.0343	No
18	Kif2a	4387	0.286	0.0393	No
19	Tnfaip3	4518	0.279	0.0411	No
20	Prep	4672	0.275	0.0419	No
21	Scg3	4812	0.269	0.0431	No
22	Pim1	4871	0.266	0.0471	No
23	Gmfb	5125	0.254	0.0438	No
24	Rnf4	6139	0.215	0.0119	No
25	L3mbtl4	6144	0.215	0.0168	No
26	Lap3	6232	0.212	0.0185	No
27	Raf1	6473	0.205	0.0145	No
28	Serpinc1	6550	0.201	0.0164	No
29	Plat	6860	0.189	0.0096	No
30	Usp15	6958	0.185	0.0103	No
31	Xpnpep1	7191	0.176	0.0060	No
32	F10	7232	0.174	0.0085	No
33	Ppp4c	7370	0.169	0.0075	No
34	Calm3	7685	0.161	-0.0002	No
35	Rbsn	7728	0.160	0.0019	No
36	Usp16	7809	0.156	0.0027	No
37	Ehd1	7903	0.153	0.0028	No
38	Cda	7962	0.151	0.0042	No
39	S100a9	8073	0.147	0.0036	No
40	Cr2	8172	0.144	0.0034	No
41	Fdx1	8612	0.134	-0.0095	No
42	Gngt2	8664	0.132	-0.0083	No
43	Car2	9137	0.117	-0.0228	No
44	Jak2	9176	0.116	-0.0215	No
45	Usp8	9252	0.114	-0.0216	No
46	Spock2	9254	0.113	-0.0189	No
47	Me1	9315	0.112	-0.0185	No
48	Lrp1	9354	0.110	-0.0174	No
49	Timp1	9682	0.100	-0.0270	No
50	Ctso	9792	0.096	-0.0287	No
51	C3	9852	0.094	-0.0287	No
52	Lta4h	9987	0.090	-0.0315	No
53	Usp14	10138	0.085	-0.0349	No
54	Adam9	10244	0.082	-0.0369	No
55	Gnai3	10281	0.081	-0.0363	No
56	Kcnip3	10304	0.080	-0.0352	No
57	Hspa5	10760	0.066	-0.0503	No
58	Cp	10852	0.063	-0.0521	No
59	Dock9	10968	0.060	-0.0549	No
60	Pik3ca	11051	0.058	-0.0566	No
61	Casp3	11434	0.045	-0.0694	No
62	Prdm4	11630	0.039	-0.0756	No
63	Kcnip2	11670	0.038	-0.0762	No
64	Psen1	11742	0.036	-0.0779	No
65	Zeb1	11930	0.030	-0.0840	No
66	Gp9	12186	0.023	-0.0928	No
67	Cebpb	12527	0.014	-0.1049	No
68	Stx4a	12560	0.013	-0.1057	No
69	Plg	12671	0.010	-0.1095	No
70	Ppp2cb	12831	0.005	-0.1152	No
71	Cd40lg	13017	0.000	-0.1219	No
72	C9	13224	-0.002	-0.1294	No
73	Irf2	13247	-0.003	-0.1301	No
74	Tmprss6	13279	-0.003	-0.1312	No
75	Olr1	13313	-0.005	-0.1323	No
76	S100a13	13356	-0.006	-0.1337	No
77	Gnai2	13388	-0.007	-0.1346	No
78	Pla2g7	13517	-0.011	-0.1390	No
79	Akap10	13576	-0.012	-0.1409	No
80	Itgam	14411	-0.035	-0.1705	No
81	Src	14479	-0.037	-0.1720	No
82	Sh2b3	14797	-0.048	-0.1825	No
83	Phex	14936	-0.051	-0.1863	No
84	Dgkg	15042	-0.054	-0.1889	No
85	Rasgrp1	15142	-0.057	-0.1912	No
86	F2	15266	-0.061	-0.1942	No
87	Cfb	15270	-0.061	-0.1929	No
88	Cd46	15419	-0.065	-0.1968	No
89	Msrb1	15576	-0.070	-0.2009	No
90	Dyrk2	15767	-0.076	-0.2060	No
91	Prcp	16083	-0.086	-0.2155	No
92	Was	16428	-0.096	-0.2258	No
93	Gca	16445	-0.096	-0.2242	No
94	Gzmb	16449	-0.096	-0.2221	No
95	Rabif	16467	-0.097	-0.2204	No
96	Pdp1	16498	-0.098	-0.2193	No
97	Irf1	16782	-0.106	-0.2271	No
98	Lck	16824	-0.107	-0.2261	No
99	Cblb	16895	-0.110	-0.2261	No
100	Dgkh	16943	-0.111	-0.2253	No
101	Plaur	16948	-0.111	-0.2228	No
102	Ctsb	16985	-0.113	-0.2215	No
103	Casp9	17218	-0.120	-0.2272	No
104	Pclo	17330	-0.123	-0.2284	No
105	Lgals3	17450	-0.127	-0.2297	No
106	Gpd2	17507	-0.129	-0.2288	No
107	Sirt6	17677	-0.135	-0.2318	No
108	Maff	17752	-0.137	-0.2313	No
109	Dock4	17787	-0.138	-0.2293	No
110	Ctsh	17928	-0.142	-0.2311	No
111	Calm1	17968	-0.143	-0.2292	No
112	F3	17969	-0.143	-0.2259	No
113	Lgmn	18651	-0.165	-0.2469	No
114	Ccl5	18958	-0.174	-0.2540	No
115	Serpinb2	19087	-0.179	-0.2545	No
116	Serpine1	19224	-0.183	-0.2552	No
117	C1qa	19414	-0.189	-0.2577	No
118	Prkcd	19646	-0.197	-0.2615	No
119	Grb2	19771	-0.201	-0.2614	No
120	Ctsl	19843	-0.204	-0.2592	No
121	Ctss	20519	-0.227	-0.2785	No
122	Dusp6	20849	-0.238	-0.2850	No
123	Pla2g4a	21009	-0.245	-0.2851	No
124	Cdh13	21073	-0.247	-0.2817	No
125	Cpq	21261	-0.255	-0.2826	No
126	Cpm	21271	-0.255	-0.2770	No
127	Hnf4a	21648	-0.270	-0.2844	No
128	Cfh	21907	-0.281	-0.2873	No
129	Ctsd	22203	-0.294	-0.2912	Yes
130	Plek	22324	-0.300	-0.2886	Yes
131	Mmp13	22393	-0.301	-0.2841	Yes
132	Mmp15	22430	-0.302	-0.2783	Yes
133	Rhog	22544	-0.307	-0.2753	Yes
134	Mmp8	22566	-0.308	-0.2689	Yes
135	Fcer1g	22620	-0.310	-0.2636	Yes
136	Pcsk9	22690	-0.313	-0.2589	Yes
137	Pfn1	22695	-0.314	-0.2517	Yes
138	Lamp2	22948	-0.324	-0.2534	Yes
139	Atox1	23332	-0.341	-0.2594	Yes
140	Col4a2	23494	-0.351	-0.2571	Yes
141	Gnb2	23503	-0.351	-0.2492	Yes
142	Actn2	23647	-0.359	-0.2461	Yes
143	Rce1	23737	-0.364	-0.2409	Yes
144	Casp4	23749	-0.364	-0.2328	Yes
145	Pik3cg	23768	-0.365	-0.2250	Yes
146	Dpp4	23791	-0.366	-0.2172	Yes
147	Prss36	23858	-0.370	-0.2110	Yes
148	Dusp5	23886	-0.372	-0.2034	Yes
149	Klkb1	23905	-0.373	-0.1954	Yes
150	Anxa5	24004	-0.378	-0.1901	Yes
151	Gng2	24317	-0.395	-0.1923	Yes
152	Gzmk	24530	-0.410	-0.1905	Yes
153	Gata3	24660	-0.417	-0.1855	Yes
154	Fcnb	25130	-0.444	-0.1923	Yes
155	Dock10	25139	-0.445	-0.1823	Yes
156	Serping1	25315	-0.458	-0.1780	Yes
157	Casp1	25583	-0.478	-0.1766	Yes
158	Lcp2	25662	-0.486	-0.1681	Yes
159	Mmp14	25726	-0.492	-0.1590	Yes
160	Ctsc	25734	-0.492	-0.1478	Yes
161	Lipa	25809	-0.499	-0.1389	Yes
162	Tfpi2	26262	-0.547	-0.1427	Yes
163	Casp7	26339	-0.558	-0.1325	Yes
164	Il6	26377	-0.563	-0.1208	Yes
165	Gp1ba	26511	-0.582	-0.1121	Yes
166	Plscr1	26520	-0.583	-0.0988	Yes
167	Lyn	26533	-0.585	-0.0856	Yes
168	Timp2	26608	-0.596	-0.0745	Yes
169	Csrp1	26668	-0.604	-0.0626	Yes
170	C1s1	26739	-0.618	-0.0507	Yes
171	Fyn	26827	-0.635	-0.0392	Yes
172	Psmb9	27026	-0.677	-0.0306	Yes
173	Kynu	27104	-0.704	-0.0171	Yes
174	Gnb4	27213	-0.737	-0.0039	Yes
175	C2	27299	-0.774	0.0110	Yes