Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group2_versus_Group3.MEP.ery_Pheno.cls #Group2_versus_Group3_repos
Phenotype	MEP.ery_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.21392417
Normalized Enrichment Score (NES)	-0.9409751
Nominal p-value	0.543021
FDR q-value	0.84732234
FWER p-Value	0.999

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Emp1	19	1.137	0.0282	No
2	Aifm3	158	0.800	0.0435	No
3	Tgfb2	470	0.641	0.0485	No
4	Slc20a1	1254	0.499	0.0326	No
5	Pdcd4	1288	0.496	0.0441	No
6	Cdk2	1428	0.483	0.0513	No
7	Bcl2l11	1473	0.477	0.0618	No
8	Igf2r	1498	0.474	0.0730	No
9	Nefh	1930	0.430	0.0682	No
10	Cd38	1965	0.428	0.0779	No
11	Prf1	2127	0.416	0.0826	No
12	Mcl1	2186	0.409	0.0908	No
13	Ppp2r5b	2229	0.406	0.0996	No
14	Etf1	2241	0.405	0.1095	No
15	App	2360	0.396	0.1153	No
16	Mmp2	2394	0.395	0.1242	No
17	Jun	2454	0.390	0.1319	No
18	Brca1	2530	0.386	0.1390	No
19	Gadd45a	2615	0.381	0.1456	No
20	Ppp3r1	2744	0.373	0.1504	No
21	Btg3	2929	0.361	0.1529	No
22	Clu	3662	0.323	0.1345	No
23	Gstm2	3931	0.310	0.1326	No
24	Ptk2	3967	0.307	0.1391	No
25	Bgn	4094	0.301	0.1422	No
26	Casp2	4306	0.290	0.1418	No
27	Top2a	4440	0.284	0.1442	No
28	Il1a	5394	0.242	0.1156	No
29	Igfbp6	6062	0.218	0.0969	No
30	Erbb2	6067	0.218	0.1023	No
31	Ctnnb1	6162	0.215	0.1043	No
32	Dnaja1	6231	0.212	0.1072	No
33	Gpx4	6388	0.208	0.1068	No
34	Timp3	6818	0.190	0.0960	No
35	Plat	6860	0.189	0.0994	No
36	Dnm1l	7038	0.182	0.0975	No
37	Cdkn1b	7048	0.181	0.1018	No
38	Hmgb2	7374	0.168	0.0942	No
39	Dffa	7832	0.156	0.0815	No
40	Casp6	8426	0.140	0.0635	No
41	Dnajc3	8482	0.138	0.0650	No
42	Cd2	8749	0.130	0.0586	No
43	Sat1	8843	0.126	0.0584	No
44	Cyld	8852	0.126	0.0613	No
45	Gsr	9127	0.118	0.0543	No
46	Bcl2l2	9304	0.112	0.0508	No
47	Timp1	9682	0.100	0.0396	No
48	Atf3	10021	0.089	0.0295	No
49	Rhob	10137	0.085	0.0275	No
50	Wee1	10384	0.078	0.0205	No
51	Lmna	10608	0.072	0.0142	No
52	Isg20	10810	0.064	0.0085	No
53	Ifitm3	11334	0.048	-0.0093	No
54	Casp3	11434	0.045	-0.0118	No
55	Dpyd	11442	0.045	-0.0109	No
56	Ank	11582	0.041	-0.0149	No
57	Psen1	11742	0.036	-0.0198	No
58	Bcl2l1	11962	0.029	-0.0270	No
59	Rock1	12410	0.017	-0.0429	No
60	Vdac2	12558	0.013	-0.0479	No
61	Rhot2	12602	0.012	-0.0492	No
62	Ier3	12716	0.008	-0.0531	No
63	Dap3	12796	0.006	-0.0558	No
64	Cd69	12873	0.004	-0.0585	No
65	Sqstm1	12982	0.000	-0.0624	No
66	Psen2	13295	-0.004	-0.0736	No
67	Crebbp	13667	-0.015	-0.0868	No
68	Tnfrsf12a	14081	-0.026	-0.1012	No
69	Bid	14230	-0.030	-0.1058	No
70	Fasl	14480	-0.037	-0.1139	No
71	Bik	14553	-0.040	-0.1155	No
72	Fdxr	14557	-0.040	-0.1146	No
73	Btg2	14654	-0.043	-0.1170	No
74	Rela	14791	-0.047	-0.1208	No
75	Eno2	15019	-0.053	-0.1277	No
76	Fez1	15068	-0.055	-0.1281	No
77	Ddit3	15074	-0.055	-0.1268	No
78	F2	15266	-0.061	-0.1323	No
79	Sod1	15433	-0.065	-0.1366	No
80	Add1	15592	-0.070	-0.1406	No
81	Plppr4	15686	-0.073	-0.1421	No
82	Retsat	15993	-0.083	-0.1512	No
83	Bnip3l	16105	-0.087	-0.1530	No
84	Gucy2e	16121	-0.087	-0.1513	No
85	Cd44	16182	-0.088	-0.1513	No
86	Sptan1	16214	-0.089	-0.1501	No
87	Bcap31	16338	-0.093	-0.1523	No
88	Gpx1	16593	-0.099	-0.1590	No
89	Xiap	16667	-0.102	-0.1591	No
90	Sod2	16692	-0.102	-0.1573	No
91	Irf1	16782	-0.106	-0.1579	No
92	Rnasel	16806	-0.107	-0.1560	No
93	Casp9	17218	-0.120	-0.1679	No
94	Cav1	17424	-0.127	-0.1722	No
95	Lgals3	17450	-0.127	-0.1699	No
96	Bcl10	17579	-0.131	-0.1712	No
97	Diablo	17708	-0.136	-0.1724	No
98	Smad7	17782	-0.138	-0.1715	No
99	Dap	18282	-0.153	-0.1858	No
100	Gch1	18464	-0.159	-0.1884	No
101	Cdkn1a	18617	-0.164	-0.1898	No
102	Ccnd2	18897	-0.172	-0.1955	No
103	Bmf	19067	-0.178	-0.1972	No
104	Erbb3	19111	-0.180	-0.1942	No
105	Hgf	19595	-0.195	-0.2068	No
106	Casp8	19791	-0.202	-0.2088	Yes
107	Gna15	19840	-0.204	-0.2053	Yes
108	Gadd45b	19956	-0.208	-0.2042	Yes
109	Gsn	19982	-0.209	-0.1998	Yes
110	Ppt1	20034	-0.211	-0.1963	Yes
111	Pak1	20140	-0.215	-0.1947	Yes
112	Ereg	20172	-0.216	-0.1903	Yes
113	Madd	20335	-0.220	-0.1906	Yes
114	Cdc25b	20336	-0.220	-0.1850	Yes
115	Hmox1	20437	-0.224	-0.1830	Yes
116	Bmp2	20533	-0.227	-0.1807	Yes
117	Tnf	20837	-0.237	-0.1857	Yes
118	Txnip	20888	-0.239	-0.1814	Yes
119	Tnfsf10	21075	-0.247	-0.1819	Yes
120	Pmaip1	21442	-0.263	-0.1886	Yes
121	Mgmt	21996	-0.285	-0.2015	Yes
122	Il1b	22042	-0.287	-0.1958	Yes
123	H1f0	22055	-0.288	-0.1889	Yes
124	Cflar	22062	-0.288	-0.1818	Yes
125	Bax	22237	-0.296	-0.1807	Yes
126	Tap1	22656	-0.312	-0.1880	Yes
127	Cd14	22845	-0.320	-0.1867	Yes
128	Fas	22998	-0.327	-0.1839	Yes
129	Ccnd1	23023	-0.327	-0.1765	Yes
130	Gpx3	23122	-0.332	-0.1716	Yes
131	Sc5d	23204	-0.336	-0.1660	Yes
132	Ifngr1	23708	-0.362	-0.1751	Yes
133	Casp4	23749	-0.364	-0.1673	Yes
134	Anxa1	23774	-0.365	-0.1589	Yes
135	Satb1	23948	-0.375	-0.1557	Yes
136	Birc3	24368	-0.399	-0.1608	Yes
137	Cth	24930	-0.431	-0.1703	Yes
138	Il18	24978	-0.433	-0.1610	Yes
139	Rara	25053	-0.438	-0.1525	Yes
140	Pea15a	25274	-0.455	-0.1490	Yes
141	F2r	25354	-0.461	-0.1401	Yes
142	Tgfbr3	25501	-0.472	-0.1335	Yes
143	Casp1	25583	-0.478	-0.1242	Yes
144	Krt18	26094	-0.527	-0.1294	Yes
145	Casp7	26339	-0.558	-0.1241	Yes
146	Il6	26377	-0.563	-0.1112	Yes
147	Timp2	26608	-0.596	-0.1044	Yes
148	Pdgfrb	26703	-0.611	-0.0923	Yes
149	Tspo	26791	-0.626	-0.0796	Yes
150	Dcn	26802	-0.628	-0.0640	Yes
151	Ebp	26927	-0.655	-0.0518	Yes
152	Plcb2	27115	-0.707	-0.0407	Yes
153	Lef1	27203	-0.735	-0.0252	Yes
154	Nedd9	27288	-0.772	-0.0086	Yes
155	Egr3	27327	-0.787	0.0100	Yes