Table: Gene sets enriched in phenotype 2 (6 samples) [plain text format]

	GS follow link to MSigDB	GS DETAILS	SIZE	ES	NES	NOM p-val	FDR q-val	FWER p-val	RANK AT MAX	LEADING EDGE
1	HALLMARK_ANDROGEN_RESPONSE	Details ...	87	0.33	1.63	0.010	0.372	0.182	3125	tags=22%, list=16%, signal=26%
2	HALLMARK_TGF_BETA_SIGNALING	Details ...	48	0.36	1.46	0.026	0.707	0.459	1508	tags=15%, list=8%, signal=16%
3	HALLMARK_FATTY_ACID_METABOLISM	Details ...	137	0.34	1.43	0.063	0.553	0.505	3432	tags=21%, list=17%, signal=25%
4	HALLMARK_ESTROGEN_RESPONSE_LATE	Details ...	152	0.31	1.35	0.063	0.682	0.629	2310	tags=19%, list=12%, signal=21%
5	HALLMARK_GLYCOLYSIS	Details ...	176	0.27	1.30	0.050	0.711	0.700	3060	tags=16%, list=15%, signal=19%
6	HALLMARK_TNFA_SIGNALING_VIA_NFKB	Details ...	173	0.34	1.30	0.131	0.602	0.704	3213	tags=22%, list=16%, signal=26%
7	HALLMARK_XENOBIOTIC_METABOLISM	Details ...	150	0.28	1.22	0.169	0.787	0.822	3695	tags=25%, list=19%, signal=31%
8	HALLMARK_HYPOXIA	Details ...	163	0.25	1.17	0.154	0.879	0.877	4113	tags=25%, list=21%, signal=31%
9	HALLMARK_APICAL_JUNCTION	Details ...	164	0.29	1.16	0.247	0.810	0.889	4025	tags=29%, list=20%, signal=36%
10	HALLMARK_MTORC1_SIGNALING	Details ...	192	0.25	1.13	0.319	0.815	0.907	4554	tags=22%, list=23%, signal=29%
11	HALLMARK_APICAL_SURFACE	Details ...	34	0.34	1.09	0.370	0.870	0.931	3833	tags=35%, list=19%, signal=44%
12	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION	Details ...	138	0.26	1.04	0.337	0.994	0.965	3276	tags=22%, list=17%, signal=26%
13	HALLMARK_KRAS_SIGNALING_DN	Details ...	103	0.26	1.04	0.387	0.924	0.968	4334	tags=25%, list=22%, signal=32%
14	HALLMARK_HEME_METABOLISM	Details ...	180	0.23	1.03	0.478	0.877	0.969	4954	tags=28%, list=25%, signal=37%
15	HALLMARK_WNT_BETA_CATENIN_SIGNALING	Details ...	37	0.35	1.03	0.438	0.833	0.969	2605	tags=22%, list=13%, signal=25%
16	HALLMARK_KRAS_SIGNALING_UP	Details ...	156	0.22	1.03	0.376	0.781	0.969	3126	tags=18%, list=16%, signal=21%
17	HALLMARK_COMPLEMENT	Details ...	164	0.24	1.02	0.427	0.742	0.969	3317	tags=18%, list=17%, signal=22%
18	HALLMARK_UV_RESPONSE_DN	Details ...	128	0.20	1.02	0.439	0.725	0.974	4208	tags=22%, list=21%, signal=28%
19	HALLMARK_HEDGEHOG_SIGNALING	Details ...	28	0.33	0.98	0.485	0.799	0.989	6862	tags=43%, list=35%, signal=66%
20	HALLMARK_ALLOGRAFT_REJECTION	Details ...	151	0.24	0.92	0.560	0.904	0.991	4242	tags=24%, list=21%, signal=30%
21	HALLMARK_NOTCH_SIGNALING		27	0.32	0.91	0.596	0.899	0.994	4447	tags=30%, list=22%, signal=38%
22	HALLMARK_ESTROGEN_RESPONSE_EARLY		159	0.22	0.91	0.611	0.863	0.994	3964	tags=22%, list=20%, signal=27%
23	HALLMARK_MYC_TARGETS_V2		57	0.24	0.86	0.590	0.937	0.999	4512	tags=19%, list=23%, signal=25%
24	HALLMARK_PEROXISOME		87	0.19	0.86	0.753	0.915	0.999	2907	tags=14%, list=15%, signal=16%
25	HALLMARK_P53_PATHWAY		188	0.19	0.79	0.808	1.000	0.999	3864	tags=21%, list=20%, signal=26%
26	HALLMARK_SPERMATOGENESIS		96	0.18	0.79	0.817	0.997	0.999	6518	tags=36%, list=33%, signal=54%
27	HALLMARK_MITOTIC_SPINDLE		197	0.14	0.75	0.808	1.000	1.000	4034	tags=15%, list=20%, signal=19%
28	HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY		48	0.22	0.74	0.793	1.000	1.000	3512	tags=21%, list=18%, signal=25%
29	HALLMARK_IL6_JAK_STAT3_SIGNALING		73	0.22	0.74	0.783	0.975	1.000	6150	tags=37%, list=31%, signal=53%
30	HALLMARK_CHOLESTEROL_HOMEOSTASIS		65	0.20	0.73	0.934	0.945	1.000	4918	tags=26%, list=25%, signal=35%
31	HALLMARK_UNFOLDED_PROTEIN_RESPONSE		107	0.15	0.69	0.894	0.963	1.000	1627	tags=7%, list=8%, signal=7%
32	HALLMARK_PI3K_AKT_MTOR_SIGNALING		99	0.13	0.59	0.986	1.000	1.000	7727	tags=37%, list=39%, signal=61%
33	HALLMARK_MYC_TARGETS_V1		188	0.10	0.32	0.988	1.000	1.000	7579	tags=34%, list=38%, signal=54%
34	HALLMARK_G2M_CHECKPOINT		194	0.07	0.27	0.996	1.000	1.000	8454	tags=39%, list=43%, signal=67%