| Dataset | CMP.CMP_Pheno.cls#Group3_versus_Group4.CMP_Pheno.cls#Group3_versus_Group4_repos |
| Phenotype | CMP_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | 0.3140012 |
| Normalized Enrichment Score (NES) | 1.3510463 |
| Nominal p-value | 0.06286837 |
| FDR q-value | 0.6817744 |
| FWER p-Value | 0.629 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Gale | 22 | 1.118 | 0.0297 | Yes |
| 2 | Id2 | 48 | 0.955 | 0.0548 | Yes |
| 3 | Ccnd1 | 71 | 0.893 | 0.0783 | Yes |
| 4 | Slc27a2 | 81 | 0.880 | 0.1021 | Yes |
| 5 | Tob1 | 87 | 0.873 | 0.1259 | Yes |
| 6 | Perp | 452 | 0.614 | 0.1243 | Yes |
| 7 | Dcxr | 470 | 0.608 | 0.1402 | Yes |
| 8 | Slc2a8 | 511 | 0.595 | 0.1546 | Yes |
| 9 | Mapk13 | 619 | 0.568 | 0.1648 | Yes |
| 10 | Mest | 682 | 0.549 | 0.1768 | Yes |
| 11 | Sfn | 929 | 0.499 | 0.1780 | Yes |
| 12 | Plac1 | 1008 | 0.486 | 0.1874 | Yes |
| 13 | Slc16a1 | 1030 | 0.481 | 0.1996 | Yes |
| 14 | Pkp3 | 1058 | 0.475 | 0.2113 | Yes |
| 15 | Fgfr3 | 1211 | 0.454 | 0.2161 | Yes |
| 16 | Unc13b | 1352 | 0.439 | 0.2211 | Yes |
| 17 | Hmgcs2 | 1359 | 0.437 | 0.2328 | Yes |
| 18 | Ltf | 1455 | 0.426 | 0.2397 | Yes |
| 19 | Il17rb | 1468 | 0.426 | 0.2509 | Yes |
| 20 | Cdh1 | 1508 | 0.421 | 0.2605 | Yes |
| 21 | Tnnc1 | 1569 | 0.415 | 0.2688 | Yes |
| 22 | Xbp1 | 1627 | 0.409 | 0.2772 | Yes |
| 23 | Mdk | 1691 | 0.399 | 0.2850 | Yes |
| 24 | Car12 | 1794 | 0.388 | 0.2905 | Yes |
| 25 | Aldh3b1 | 1832 | 0.385 | 0.2992 | Yes |
| 26 | Tmprss3 | 2094 | 0.360 | 0.2958 | Yes |
| 27 | Opn3 | 2134 | 0.358 | 0.3037 | Yes |
| 28 | Il6st | 2164 | 0.355 | 0.3120 | Yes |
| 29 | Ret | 2310 | 0.340 | 0.3140 | Yes |
| 30 | Slc22a5 | 2635 | 0.317 | 0.3062 | No |
| 31 | Amfr | 2812 | 0.303 | 0.3056 | No |
| 32 | Blvrb | 2980 | 0.291 | 0.3051 | No |
| 33 | Car2 | 3126 | 0.277 | 0.3054 | No |
| 34 | Cyp26b1 | 3153 | 0.275 | 0.3116 | No |
| 35 | Tpd52l1 | 3732 | 0.241 | 0.2888 | No |
| 36 | Olfm1 | 3922 | 0.232 | 0.2856 | No |
| 37 | Slc26a2 | 3934 | 0.231 | 0.2914 | No |
| 38 | Slc1a4 | 3953 | 0.229 | 0.2968 | No |
| 39 | Ass1 | 3967 | 0.228 | 0.3024 | No |
| 40 | Rabep1 | 4071 | 0.223 | 0.3033 | No |
| 41 | Mocs2 | 4163 | 0.218 | 0.3047 | No |
| 42 | Slc7a5 | 4398 | 0.207 | 0.2984 | No |
| 43 | Dynlt3 | 4687 | 0.192 | 0.2891 | No |
| 44 | Papss2 | 4749 | 0.188 | 0.2911 | No |
| 45 | Slc24a3 | 4784 | 0.187 | 0.2945 | No |
| 46 | Aldh3a2 | 4788 | 0.186 | 0.2995 | No |
| 47 | Scarb1 | 4963 | 0.178 | 0.2956 | No |
| 48 | Bcl2 | 4969 | 0.177 | 0.3002 | No |
| 49 | Cish | 5315 | 0.163 | 0.2871 | No |
| 50 | Frk | 5316 | 0.163 | 0.2916 | No |
| 51 | Rab31 | 5458 | 0.157 | 0.2887 | No |
| 52 | Rapgefl1 | 5524 | 0.153 | 0.2896 | No |
| 53 | Xrcc3 | 5820 | 0.141 | 0.2785 | No |
| 54 | Itpk1 | 5825 | 0.141 | 0.2822 | No |
| 55 | Atp2b4 | 5963 | 0.139 | 0.2790 | No |
| 56 | Gla | 6176 | 0.131 | 0.2718 | No |
| 57 | S100a9 | 6295 | 0.127 | 0.2693 | No |
| 58 | Lsr | 6370 | 0.124 | 0.2690 | No |
| 59 | Wfs1 | 6385 | 0.123 | 0.2716 | No |
| 60 | Snx10 | 6462 | 0.120 | 0.2711 | No |
| 61 | Homer2 | 6481 | 0.119 | 0.2734 | No |
| 62 | Myb | 6567 | 0.115 | 0.2723 | No |
| 63 | Fkbp4 | 6810 | 0.106 | 0.2628 | No |
| 64 | Add3 | 6815 | 0.106 | 0.2656 | No |
| 65 | Idh2 | 6974 | 0.101 | 0.2603 | No |
| 66 | St14 | 7239 | 0.091 | 0.2493 | No |
| 67 | Dhcr7 | 7384 | 0.086 | 0.2443 | No |
| 68 | Celsr2 | 7517 | 0.081 | 0.2398 | No |
| 69 | Cdc6 | 7612 | 0.078 | 0.2372 | No |
| 70 | Abhd2 | 7707 | 0.074 | 0.2345 | No |
| 71 | Nxt1 | 7756 | 0.072 | 0.2340 | No |
| 72 | Flnb | 7879 | 0.069 | 0.2297 | No |
| 73 | Stil | 8020 | 0.064 | 0.2243 | No |
| 74 | Hspa4l | 8045 | 0.063 | 0.2248 | No |
| 75 | Zfp36 | 8163 | 0.060 | 0.2205 | No |
| 76 | Igfbp4 | 8859 | 0.036 | 0.1861 | No |
| 77 | Fabp5 | 9124 | 0.026 | 0.1733 | No |
| 78 | Cd9 | 9196 | 0.024 | 0.1704 | No |
| 79 | Ptger3 | 9225 | 0.023 | 0.1696 | No |
| 80 | Pdcd4 | 9298 | 0.021 | 0.1665 | No |
| 81 | Prkar2b | 9539 | 0.014 | 0.1546 | No |
| 82 | Jak2 | 9601 | 0.011 | 0.1519 | No |
| 83 | Gfus | 9630 | 0.010 | 0.1507 | No |
| 84 | Ugdh | 9692 | 0.008 | 0.1478 | No |
| 85 | Dusp2 | 9805 | 0.005 | 0.1423 | No |
| 86 | Dlg5 | 9956 | 0.000 | 0.1346 | No |
| 87 | Siah2 | 10178 | -0.003 | 0.1234 | No |
| 88 | Klf4 | 10215 | -0.004 | 0.1217 | No |
| 89 | Cox6c | 10245 | -0.005 | 0.1204 | No |
| 90 | Sord | 10325 | -0.008 | 0.1166 | No |
| 91 | Nrip1 | 10384 | -0.009 | 0.1139 | No |
| 92 | Rps6ka2 | 10522 | -0.014 | 0.1073 | No |
| 93 | Jak1 | 10816 | -0.023 | 0.0930 | No |
| 94 | Fos | 11260 | -0.037 | 0.0714 | No |
| 95 | Top2a | 11738 | -0.052 | 0.0485 | No |
| 96 | Scube2 | 11785 | -0.054 | 0.0477 | No |
| 97 | Fdft1 | 11922 | -0.058 | 0.0423 | No |
| 98 | Cd44 | 12090 | -0.063 | 0.0356 | No |
| 99 | Chst8 | 12311 | -0.070 | 0.0263 | No |
| 100 | Plxnb1 | 12426 | -0.072 | 0.0225 | No |
| 101 | Myof | 12537 | -0.075 | 0.0189 | No |
| 102 | Tiam1 | 12650 | -0.079 | 0.0154 | No |
| 103 | Elovl5 | 12741 | -0.082 | 0.0130 | No |
| 104 | Dnajc1 | 12979 | -0.091 | 0.0035 | No |
| 105 | Fkbp5 | 13234 | -0.099 | -0.0067 | No |
| 106 | Btg3 | 13367 | -0.104 | -0.0106 | No |
| 107 | Abca3 | 13445 | -0.107 | -0.0116 | No |
| 108 | Ppif | 13453 | -0.107 | -0.0090 | No |
| 109 | Arl3 | 13545 | -0.111 | -0.0105 | No |
| 110 | Aff1 | 14101 | -0.132 | -0.0352 | No |
| 111 | Isg20 | 14197 | -0.136 | -0.0363 | No |
| 112 | Kif20a | 14254 | -0.139 | -0.0353 | No |
| 113 | Cacna2d2 | 14412 | -0.144 | -0.0393 | No |
| 114 | Gjb3 | 14509 | -0.148 | -0.0402 | No |
| 115 | Farp1 | 14593 | -0.152 | -0.0402 | No |
| 116 | Ncor2 | 14860 | -0.164 | -0.0492 | No |
| 117 | Ptpn6 | 15003 | -0.171 | -0.0518 | No |
| 118 | Plk4 | 15021 | -0.171 | -0.0479 | No |
| 119 | Tjp3 | 15239 | -0.177 | -0.0541 | No |
| 120 | Large1 | 15243 | -0.177 | -0.0494 | No |
| 121 | Rbbp8 | 15302 | -0.180 | -0.0474 | No |
| 122 | Kcnk5 | 15335 | -0.181 | -0.0440 | No |
| 123 | Llgl2 | 15459 | -0.186 | -0.0452 | No |
| 124 | Plaat3 | 15537 | -0.190 | -0.0439 | No |
| 125 | Sgk1 | 15647 | -0.195 | -0.0440 | No |
| 126 | Sult2b1 | 15760 | -0.201 | -0.0442 | No |
| 127 | Tspan13 | 15870 | -0.207 | -0.0441 | No |
| 128 | Dnajc12 | 15967 | -0.212 | -0.0431 | No |
| 129 | Nab2 | 16223 | -0.225 | -0.0499 | No |
| 130 | Pgr | 16418 | -0.235 | -0.0533 | No |
| 131 | Scnn1a | 16608 | -0.247 | -0.0562 | No |
| 132 | Bag1 | 16691 | -0.253 | -0.0534 | No |
| 133 | Rnaseh2a | 16816 | -0.260 | -0.0525 | No |
| 134 | Etfb | 16849 | -0.262 | -0.0469 | No |
| 135 | Mapt | 17114 | -0.280 | -0.0527 | No |
| 136 | Impa2 | 17288 | -0.293 | -0.0534 | No |
| 137 | Anxa9 | 17445 | -0.302 | -0.0530 | No |
| 138 | Gins2 | 17452 | -0.303 | -0.0450 | No |
| 139 | Prlr | 17565 | -0.311 | -0.0421 | No |
| 140 | Mettl3 | 17570 | -0.311 | -0.0337 | No |
| 141 | Ckb | 17752 | -0.325 | -0.0340 | No |
| 142 | Cdc20 | 17784 | -0.326 | -0.0266 | No |
| 143 | Tst | 17860 | -0.333 | -0.0212 | No |
| 144 | Ptges | 18141 | -0.361 | -0.0256 | No |
| 145 | Gper1 | 18159 | -0.362 | -0.0165 | No |
| 146 | Slc29a1 | 18244 | -0.373 | -0.0105 | No |
| 147 | Tfpi2 | 18318 | -0.382 | -0.0037 | No |
| 148 | Chpt1 | 18522 | -0.400 | -0.0030 | No |
| 149 | Pdzk1 | 19111 | -0.495 | -0.0193 | No |
| 150 | Cav1 | 19125 | -0.497 | -0.0063 | No |
| 151 | Batf | 19288 | -0.537 | 0.0003 | No |
| 152 | St6galnac2 | 19735 | -0.880 | 0.0018 | No |

