Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CMP.CMP_Pheno.cls#Group3_versus_Group4.CMP_Pheno.cls#Group3_versus_Group4_repos
Phenotype	CMP_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	0.23531447
Normalized Enrichment Score (NES)	0.92086446
Nominal p-value	0.55959594
FDR q-value	0.90387774
FWER p-Value	0.991

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cd80	136	0.816	0.0203	Yes
2	Tnf	293	0.678	0.0350	Yes
3	Itgb2	473	0.608	0.0461	Yes
4	Cd247	487	0.602	0.0656	Yes
5	Ccl5	628	0.566	0.0773	Yes
6	Hdac9	677	0.551	0.0933	Yes
7	H2-Oa	822	0.518	0.1032	Yes
8	Il12a	902	0.505	0.1160	Yes
9	Il18	903	0.505	0.1329	Yes
10	Ltb	960	0.492	0.1465	Yes
11	Crtam	1335	0.441	0.1421	Yes
12	Bcat1	1539	0.417	0.1457	Yes
13	Il7	1583	0.414	0.1573	Yes
14	Fas	2043	0.365	0.1461	Yes
15	Akt1	2064	0.363	0.1572	Yes
16	Csf1	2205	0.351	0.1618	Yes
17	Ccr5	2231	0.348	0.1721	Yes
18	Mmp9	2486	0.327	0.1701	Yes
19	C2	2535	0.325	0.1785	Yes
20	Cd96	2676	0.314	0.1818	Yes
21	Eif3j1	2691	0.312	0.1915	Yes
22	Csk	3193	0.272	0.1750	Yes
23	Thy1	3246	0.268	0.1813	Yes
24	Il12rb1	3294	0.265	0.1878	Yes
25	Nme1	3350	0.262	0.1937	Yes
26	Mrpl3	3425	0.258	0.1986	Yes
27	Tlr1	3451	0.256	0.2058	Yes
28	Traf2	3497	0.254	0.2120	Yes
29	F2r	3581	0.248	0.2161	Yes
30	Egfr	3690	0.242	0.2187	Yes
31	Il2rg	3833	0.237	0.2193	Yes
32	Cd79a	3992	0.227	0.2188	Yes
33	Gcnt1	4092	0.221	0.2212	Yes
34	Ifngr2	4153	0.219	0.2254	Yes
35	Hif1a	4202	0.216	0.2302	Yes
36	H2-Ob	4242	0.213	0.2353	Yes
37	Il27ra	4402	0.207	0.2341	No
38	Itk	4660	0.193	0.2275	No
39	Ache	4883	0.181	0.2222	No
40	Ccnd2	5566	0.152	0.1925	No
41	Abce1	5645	0.148	0.1935	No
42	Ets1	5742	0.145	0.1934	No
43	Was	5818	0.141	0.1943	No
44	Icam1	6547	0.116	0.1611	No
45	Capg	6568	0.115	0.1639	No
46	Galnt1	6632	0.113	0.1644	No
47	Itgal	6679	0.111	0.1658	No
48	Apbb1	6913	0.102	0.1573	No
49	H2-Aa	7338	0.087	0.1386	No
50	Cd4	7518	0.081	0.1322	No
51	Abi1	7604	0.078	0.1305	No
52	Tgfb1	7717	0.074	0.1272	No
53	Irf8	7721	0.073	0.1295	No
54	Ripk2	7869	0.069	0.1244	No
55	Flna	7926	0.067	0.1238	No
56	Cd1d2	8276	0.056	0.1078	No
57	Elane	8426	0.051	0.1019	No
58	Bcl3	8500	0.048	0.0998	No
59	Fgr	8510	0.047	0.1009	No
60	Degs1	8555	0.046	0.1002	No
61	Map3k7	8684	0.042	0.0951	No
62	Ly75	8745	0.040	0.0933	No
63	Cd74	8935	0.033	0.0848	No
64	Mtif2	8947	0.032	0.0853	No
65	Wars1	8961	0.032	0.0857	No
66	Ube2n	9029	0.030	0.0833	No
67	Tpd52	9208	0.024	0.0750	No
68	Fcgr2b	9240	0.023	0.0742	No
69	Rpl9	9374	0.019	0.0680	No
70	Glmn	9472	0.016	0.0636	No
71	Jak2	9601	0.011	0.0575	No
72	Il2ra	9963	0.000	0.0391	No
73	St8sia4	10080	-0.000	0.0332	No
74	Rps3a1	10154	-0.002	0.0295	No
75	Il11	10192	-0.004	0.0278	No
76	Ccr1	10212	-0.004	0.0269	No
77	H2-DMa	10231	-0.005	0.0262	No
78	Map4k1	10272	-0.006	0.0243	No
79	Cd47	10504	-0.013	0.0130	No
80	Zap70	10574	-0.016	0.0100	No
81	Ptprc	11152	-0.034	-0.0183	No
82	Ccr2	11181	-0.035	-0.0185	No
83	B2m	11295	-0.038	-0.0230	No
84	Srgn	11509	-0.044	-0.0324	No
85	Prkcb	11660	-0.049	-0.0384	No
86	Eif4g3	11746	-0.052	-0.0410	No
87	Ncf4	11912	-0.058	-0.0475	No
88	Bcl10	11927	-0.058	-0.0462	No
89	Tap1	12050	-0.062	-0.0504	No
90	Lck	12097	-0.063	-0.0506	No
91	H2-DMb2	12138	-0.065	-0.0505	No
92	Il6	12296	-0.070	-0.0562	No
93	Lyn	12542	-0.076	-0.0661	No
94	Tapbp	12573	-0.077	-0.0651	No
95	Psmb10	12592	-0.077	-0.0634	No
96	Ikbkb	12727	-0.081	-0.0676	No
97	Socs5	12918	-0.088	-0.0743	No
98	Eif3a	13098	-0.094	-0.0803	No
99	Ifngr1	13182	-0.098	-0.0813	No
100	Tlr2	13274	-0.101	-0.0825	No
101	Tlr3	13320	-0.103	-0.0814	No
102	Cfp	13332	-0.103	-0.0785	No
103	Tgfb2	13460	-0.108	-0.0814	No
104	Nlrp3	13482	-0.108	-0.0789	No
105	Stat4	13709	-0.117	-0.0865	No
106	Stab1	13745	-0.119	-0.0843	No
107	Irf4	13748	-0.119	-0.0804	No
108	Npm1	13809	-0.121	-0.0794	No
109	Hcls1	14120	-0.133	-0.0908	No
110	Icosl	14486	-0.147	-0.1045	No
111	Il10	14498	-0.148	-0.1001	No
112	Il18rap	14795	-0.161	-0.1098	No
113	Eif3d	14804	-0.161	-0.1049	No
114	Il16	14987	-0.170	-0.1085	No
115	Igsf6	14991	-0.170	-0.1029	No
116	Ptpn6	15003	-0.171	-0.0978	No
117	Eif5a	15022	-0.171	-0.0930	No
118	Il1b	15050	-0.172	-0.0886	No
119	Tlr6	15164	-0.174	-0.0886	No
120	Il15	15203	-0.175	-0.0847	No
121	Ube2d1	15257	-0.177	-0.0815	No
122	Acvr2a	15350	-0.181	-0.0801	No
123	Inhba	15391	-0.183	-0.0760	No
124	Il2	15654	-0.195	-0.0829	No
125	Trat1	15679	-0.196	-0.0775	No
126	Nck1	15777	-0.202	-0.0758	No
127	Spi1	15794	-0.203	-0.0698	No
128	Ifnar2	15853	-0.206	-0.0659	No
129	Rps9	16022	-0.214	-0.0673	No
130	Ctss	16067	-0.216	-0.0623	No
131	Brca1	16123	-0.220	-0.0578	No
132	Ly86	16272	-0.227	-0.0577	No
133	Rpl3l	16352	-0.232	-0.0540	No
134	Cdkn2a	16365	-0.232	-0.0469	No
135	Il4	16383	-0.233	-0.0400	No
136	Cd86	16763	-0.257	-0.0507	No
137	Stat1	16808	-0.260	-0.0443	No
138	Tap2	17222	-0.288	-0.0557	No
139	Elf4	17388	-0.298	-0.0542	No
140	Gpr65	17401	-0.298	-0.0449	No
141	Cxcl9	17426	-0.300	-0.0360	No
142	Il4ra	17537	-0.308	-0.0314	No
143	Lcp2	17611	-0.314	-0.0246	No
144	Socs1	17976	-0.345	-0.0317	No
145	Lif	18445	-0.392	-0.0424	No
146	Ccnd3	18696	-0.424	-0.0410	No
147	Cd28	18731	-0.428	-0.0285	No
148	Pf4	18983	-0.471	-0.0256	No
149	Irf7	19441	-0.587	-0.0293	No
150	Dyrk3	19469	-0.599	-0.0106	No
151	Prkcg	19690	-0.778	0.0041	No