GimmeMotifs v0.18.0

GimmeMotifs_1 (Gimme)

Motif and consensus

	GM.5.0.C2H2_ZF.0242 0.00e+00
GAATGGAATGGAAT	Database match

Significance and enrichment

gc enrichment 36.48 p-value 0.00 ROC_AUC 0.685 MNCP 5.089

Positional Preference Plot

(Fullscreen)

GimmeMotifs_2 (Gimme)

Motif and consensus

	GM.5.0.C2H2_ZF.0189 1.37e-05
TCGAATGGAATCGAATGGAA	Database match

Significance and enrichment

gc enrichment 36.76 p-value 0.00 ROC_AUC 0.685 MNCP 5.195

Positional Preference Plot

(Fullscreen)

GimmeMotifs_3 (Gimme)

Motif and consensus

	GM.5.0.C2H2_ZF.0242 2.93e-07
ATksAATksmAT	Database match

Significance and enrichment

gc enrichment 35.92 p-value 0.00 ROC_AUC 0.674 MNCP 4.553

Positional Preference Plot

(Fullscreen)

GimmeMotifs_4 (Gimme)

Motif and consensus

	GM.5.0.Unknown.0074 2.40e-13
TCGAAT	Database match

Significance and enrichment

gc enrichment 1.97 p-value 0.02 ROC_AUC 0.724 MNCP 2.565

Positional Preference Plot

(Fullscreen)

GimmeMotifs_5 (Gimme)

Motif and consensus

	GM.5.0.Homeodomain.0122 1.10e-03
GAwTGsAwTC	Database match

Significance and enrichment

gc enrichment 13.65 p-value 0.00 ROC_AUC 0.677 MNCP 3.329

Positional Preference Plot

(Fullscreen)

Result Files

• Results
• Cluster report
• Weight matrices
• Parameters
• Log

Identified Motifs

• GimmeMotifs_1
• GimmeMotifs_2
• GimmeMotifs_3
• GimmeMotifs_4
• GimmeMotifs_5

Reference

Please cite:
van Heeringen, SJ and Veenstra, GJC, Bioinformatics.