iPSC project


single-cell RNA-seq data


single-cell RNA-seq basic data

PCA result
tSNE result
Marker gene expression in PCA
Marker gene expression in tSNE

single-cell RNA-seq pseudotime analysis

niPSCs Monocle method (New Data!)
R204W Monocle method (New Data!)
R304W Monocle method (New Data!)
All samples Monocle method (New Data!)
Monocle method
Diddusion Maps method
Slicer method
TSCAN method

single-cell RNA-seq and public bulk RNA-seq correlation

Correlation in PCA
PCA split with different cell type
Correlation in tSNE
tSNE split with different cell type

bulk RNA-seq data


bulk RNA-seq basic data

xlsx files

All samples Deseq2 result summary
Deseq2 differental expression gene results
Go analysis result
All samples expression results(RPKM and TPM)

pdf files

No KRT Cluster
All sample Cluster

bulk RNA-seq and single-cell RNA-seq correlation

Correlation in PCA
Correlation in tSNE

normal iPSCs and normal KC bulk RNA-seq data

xlsx files

PCA genelist
Cluster genelist
Cluster each clusters Go analysis results
PCA each PCs Go analysis results

pdf files

Nnormal bkRNA cluster and PCA result
Nnormal bkRNA cluster gene expression