DatasetMast.Mast_Pheno.cls
#Group6_versus_Group8.Mast_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeMast_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class4
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)0.22444469
Normalized Enrichment Score (NES)1.0664657
Nominal p-value0.3256705
FDR q-value0.7339497
FWER p-Value0.987
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Surf1840.8660.0123Yes
2Mrpl351790.7510.0213Yes
3Timm8b1900.7400.0368Yes
4Fdx11910.7390.0532Yes
5Timm92050.7300.0683Yes
6Fxn2110.7260.0840Yes
7Immt2180.7220.0995Yes
8Cyb5r32830.6750.1092Yes
9Hspa92850.6750.1240Yes
10Etfb3230.6440.1353Yes
11Sdha4030.6150.1425Yes
12Timm104540.5990.1516Yes
13Iscu4650.5950.1640Yes
14Hadha5560.5680.1692Yes
15Cyc15660.5650.1810Yes
16Atp1b15830.5570.1920Yes
17Hadhb6070.5520.2024Yes
18Got26430.5370.2114Yes
19Alas17590.5010.2131Yes
20Idh3a9080.4620.2113Yes
21Gpi111250.4350.2033Yes
22Decr111870.4260.2077Yes
23Sdhd11960.4240.2165Yes
24Pdhx13560.4060.2125Yes
25Ndufv213850.4020.2191Yes
26Ndufa914640.3890.2214Yes
27Prdx315520.3740.2225Yes
28Hccs16280.3620.2244Yes
29Ndufa517740.3420.2202No
30Atp6v1h18550.3310.2210No
31Grpel120160.3140.2149No
32Ndufa621360.3010.2119No
33Etfdh22920.2870.2056No
34Mtrf122950.2870.2118No
35Aco224360.2760.2065No
36Opa125000.2730.2074No
37Uqcrc125270.2700.2112No
38Cox7b25960.2670.2116No
39Retsat27410.2580.2056No
40Ndufb228750.2480.2002No
41Slc25a431550.2280.1825No
42Atp6ap132540.2190.1794No
43Bckdha32600.2180.1838No
44Polr2f33570.2090.1806No
45Ndufb333650.2080.1846No
46Ndufs734310.2010.1838No
47Aifm136080.1870.1735No
48Mrps1236130.1860.1773No
49Idh136510.1830.1784No
50Atp6v1g136530.1830.1823No
51Eci136990.1800.1826No
52Slc25a337630.1750.1814No
53Ndufa438780.1670.1758No
54Ndufb740690.1510.1636No
55Echs141080.1480.1638No
56Slc25a2041830.1420.1609No
57Cox4i142450.1370.1590No
58Idh3b46070.1080.1319No
59Uqcrq47260.0990.1245No
60Pmpca49860.0790.1052No
61Htra250800.0720.0992No
62Uqcrfs151170.0700.0978No
63Ldha51270.0690.0986No
64Uqcrh51690.0670.0967No
65Vdac352430.0610.0921No
66Cox8a52660.0590.0916No
67Cox5a52870.0570.0913No
68Acadm55050.0420.0745No
69Oat55430.0390.0723No
70Atp6v1d56050.0350.0681No
71Idh256770.0310.0630No
72Phyh56780.0310.0637No
73Atp6v1c157300.0270.0601No
74Cox5b57620.0240.0581No
75Timm17a58190.0200.0540No
76Cox1158770.0160.0497No
77Uqcr1059600.0110.0433No
78Fh160270.0060.0380No
79Cs60340.0060.0377No
80Suclg160800.0020.0340No
81Ech160940.0010.0330No
82Mtrr6364-0.0010.0111No
83Acat16376-0.0020.0102No
84Pdp16418-0.0040.0070No
85Atp6v0e6454-0.0060.0043No
86Rhot16504-0.0100.0005No
87Cox106703-0.023-0.0152No
88Cpt1a6756-0.025-0.0188No
89Cox7c6789-0.027-0.0209No
90Por6807-0.028-0.0216No
91Supv3l16914-0.034-0.0295No
92Cox157039-0.043-0.0387No
93Slc25a117092-0.045-0.0419No
94Sucla27150-0.049-0.0455No
95Slc25a57172-0.051-0.0460No
96Timm137175-0.051-0.0451No
97Ndufs87220-0.054-0.0475No
98Ndufc27314-0.058-0.0538No
99Ndufs27318-0.059-0.0527No
100Ndufa27588-0.075-0.0730No
101Tomm227598-0.076-0.0720No
102Pdha17608-0.077-0.0711No
103Mpc17610-0.077-0.0695No
104Acaa27622-0.078-0.0686No
105Ndufv17671-0.081-0.0708No
106Vdac27687-0.082-0.0702No
107Dlst7704-0.084-0.0696No
108Rhot27746-0.086-0.0710No
109Cox6c7785-0.089-0.0722No
110Tcirg17787-0.089-0.0703No
111Glud17798-0.090-0.0691No
112Idh3g7984-0.103-0.0819No
113Pdhb7994-0.103-0.0804No
114Nqo28074-0.109-0.0844No
115Gpx48096-0.111-0.0836No
116Oxa1l8185-0.117-0.0882No
117Atp6v0c8209-0.119-0.0875No
118Cox178226-0.120-0.0861No
119Cox7a28254-0.122-0.0856No
120Aldh6a18284-0.124-0.0853No
121Uqcrb8438-0.136-0.0947No
122Etfa8458-0.137-0.0932No
123Mrpl158603-0.148-0.1017No
124Mrpl118624-0.149-0.1000No
125Acaa1a8628-0.149-0.0970No
126Mgst38688-0.153-0.0984No
127Ndufa38722-0.156-0.0977No
128Mdh18938-0.173-0.1114No
129Mrpl348970-0.176-0.1100No
130Mrps119119-0.188-0.1179No
131Abcb79157-0.191-0.1167No
132Slc25a129199-0.194-0.1157No
133Cox7a2l9206-0.194-0.1119No
134Cox6a19213-0.195-0.1081No
135Hsd17b109295-0.201-0.1103No
136Ndufs19441-0.212-0.1174No
137Ndufb59675-0.233-0.1313No
138Mrps229700-0.236-0.1280No
139Afg3l29740-0.240-0.1259No
140Atp6v1e19775-0.243-0.1233No
141Ndufa79809-0.245-0.1205No
142Acadvl9815-0.246-0.1155No
143Timm509846-0.248-0.1125No
144Ndufs410030-0.262-0.1216No
145Sdhc10039-0.264-0.1164No
146Ndufs610145-0.267-0.1190No
147Uqcr1110241-0.269-0.1208No
148Dlat10264-0.272-0.1166No
149Ndufs310340-0.280-0.1165No
150Cyb5a10466-0.294-0.1202No
151Ndufb810582-0.307-0.1228No
152Ndufc110666-0.316-0.1225No
153Mtx210863-0.334-0.1311No
154Ndufab110894-0.339-0.1261No
155Lrpprc11047-0.356-0.1306No
156Dld11104-0.360-0.1272No
157Ndufb611188-0.373-0.1257No
158Mrps3011238-0.380-0.1213No
159Sdhb11280-0.386-0.1161No
160Mrps1511524-0.427-0.1264No
161Tomm70a11581-0.439-0.1213No
162Ogdh11582-0.439-0.1116No
163Mdh211613-0.447-0.1041No
164Casp711617-0.448-0.0945No
165Acadsb11682-0.455-0.0896No
166Cox6b111775-0.471-0.0867No
167Uqcrc211776-0.471-0.0762No
168Ndufa111792-0.474-0.0670No
169Atp6v1f11893-0.498-0.0641No
170Atp6v0b11956-0.517-0.0577No
171Vdac112018-0.539-0.0508No
172Atp5pb12049-0.548-0.0411No
173Nnt12066-0.554-0.0301No
174Mfn212221-0.632-0.0287No
175Phb212285-0.677-0.0188No
176Bax12321-0.709-0.0060No
177Ndufa812322-0.7100.0097No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION