DatasetMast.Mast_Pheno.cls
#Group6_versus_Group8.Mast_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeMast_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.23300797
Normalized Enrichment Score (NES)-0.86392725
Nominal p-value0.74583334
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Rtp4720.8900.0194No
2Ncoa31760.7520.0324No
3Mthfd22080.7300.0507No
4Nod14930.5830.0441No
5Isg207950.4890.0336No
6P2ry148610.4720.0417No
7Psmb910400.4440.0398No
8Isoc114750.3870.0155No
9Il18bp15410.3770.0210No
10Psmb215730.3710.0290No
11Slc25a2815970.3670.0376No
12Ifit216290.3620.0453No
13Il15ra17370.3460.0465No
14Nfkb117590.3440.0546No
15Xaf118070.3370.0603No
16Dhx5821570.2980.0404No
17Psme121600.2980.0487No
18Ifi3522520.2910.0496No
19Sri22750.2880.0560No
20Irf123380.2830.0590No
21Epsti123640.2800.0649No
22Irf525510.2680.0574No
23Gch125920.2670.0618No
24Selp26880.2590.0614No
25Ddx6027670.2550.0623No
26Rsad227780.2530.0687No
27Ciita27910.2530.0749No
28Bank128030.2530.0812No
29Icam130050.2360.0716No
30Psme232250.2210.0601No
31Lgals3bp32290.2210.0661No
32Ifitm335970.1870.0415No
33Bst236020.1870.0465No
34Pnpt136200.1860.0504No
35St3gal536360.1840.0545No
36Tor1b38540.1690.0416No
37Tapbp40520.1530.0299No
38Pla2g4a40630.1510.0334No
39Oasl142430.1370.0228No
40Cdkn1a42520.1370.0260No
41Trafd144760.1180.0112No
42Casp845930.1100.0049No
43Znfx147980.093-0.0090No
44Stat148810.087-0.0132No
45Lap349240.084-0.0143No
46Pim149610.081-0.0149No
47Casp449890.079-0.0148No
48Cd6950210.077-0.0152No
49Il4ra50720.073-0.0172No
50Cd8650860.072-0.0162No
51Pml53550.052-0.0365No
52Wars154410.046-0.0421No
53Irf255140.041-0.0468No
54Tnfaip355200.040-0.0461No
55Trim1455260.040-0.0453No
56Tnfsf1056530.032-0.0547No
57Ripk258690.016-0.0717No
58Casp16370-0.002-0.1123No
59Cmklr16430-0.005-0.1170No
60Fgl26481-0.008-0.1208No
61Txnip6746-0.025-0.1416No
62Irf76781-0.026-0.1436No
63Trim256814-0.028-0.1454No
64Trim216829-0.029-0.1457No
65Lats27083-0.045-0.1650No
66Psmb107125-0.048-0.1670No
67Ripk17188-0.052-0.1706No
68Rigi7413-0.063-0.1870No
69Eif4e37582-0.075-0.1985No
70Stat47624-0.078-0.1997No
71Sod27685-0.082-0.2022No
72Rnf317784-0.089-0.2077No
73Irf87924-0.100-0.2161No
74Ifi448020-0.106-0.2208No
75Sp1108027-0.107-0.2183No
76Il68050-0.108-0.2170No
77Parp148059-0.108-0.2146No
78Tap18120-0.112-0.2163No
79Jak28162-0.115-0.2164No
80Ogfr8168-0.115-0.2135No
81Ly6e8184-0.117-0.2114No
82Psma38235-0.121-0.2120No
83Pde4b8246-0.122-0.2094No
84Nampt8256-0.123-0.2066No
85Hif1a8469-0.138-0.2199No
86Ube2l68475-0.138-0.2164No
87Trim268579-0.146-0.2206No
88Mvp8598-0.148-0.2179No
89Btg18604-0.148-0.2141No
90Adar8805-0.162-0.2258No
91Pnp8895-0.169-0.2282Yes
92Arid5b8918-0.171-0.2251Yes
93Cmtr18935-0.172-0.2215Yes
94Eif2ak29000-0.178-0.2217Yes
95Gbp39010-0.178-0.2173Yes
96Casp39060-0.182-0.2161Yes
97Vamp89122-0.188-0.2157Yes
98St8sia49124-0.189-0.2104Yes
99Nlrc59196-0.194-0.2107Yes
100Psmb89207-0.194-0.2060Yes
101Rapgef69277-0.200-0.2059Yes
102Rnf2139284-0.200-0.2007Yes
103Zbp19292-0.201-0.1956Yes
104Ptpn29314-0.202-0.1915Yes
105Auts29344-0.204-0.1881Yes
106B2m9427-0.210-0.1888Yes
107H2-DMa9457-0.214-0.1851Yes
108Parp129480-0.216-0.1807Yes
109Ptpn19505-0.218-0.1765Yes
110Isg159548-0.221-0.1736Yes
111Arl4a9575-0.224-0.1694Yes
112Stat29579-0.224-0.1632Yes
113Plscr19604-0.226-0.1587Yes
114Nfkbia9859-0.248-0.1723Yes
115Samd9l9879-0.249-0.1668Yes
116Nmi9882-0.249-0.1599Yes
117Peli19946-0.254-0.1578Yes
118Lcp29958-0.256-0.1514Yes
119Itgb710061-0.266-0.1521Yes
120Oas210062-0.266-0.1446Yes
121Nup9310067-0.266-0.1373Yes
122Il710178-0.267-0.1387Yes
123Vamp510364-0.283-0.1457Yes
124Bpgm10385-0.285-0.1392Yes
125Ifnar210437-0.291-0.1351Yes
126Herc610469-0.295-0.1292Yes
127Oas310519-0.300-0.1247Yes
128Batf210538-0.302-0.1176Yes
129Pfkp10603-0.310-0.1139Yes
130Tnfaip210630-0.312-0.1072Yes
131Cd27410692-0.319-0.1031Yes
132Cmpk210823-0.333-0.1042Yes
133Irf910939-0.346-0.1037Yes
134Samhd111026-0.353-0.1006Yes
135Ptpn611182-0.372-0.1027Yes
136Mx211291-0.388-0.1004Yes
137Il10ra11301-0.390-0.0901Yes
138Ifih111363-0.399-0.0837Yes
139Sppl2a11405-0.406-0.0755Yes
140Ifitm211471-0.416-0.0689Yes
141Rbck111514-0.425-0.0603Yes
142Casp711617-0.448-0.0558Yes
143Usp1811710-0.461-0.0502Yes
144Psma211717-0.463-0.0375Yes
145Il1511736-0.465-0.0258Yes
146Stat311885-0.497-0.0237Yes
147Tdrd711936-0.508-0.0133Yes
148Helz212040-0.545-0.0062Yes
149Myd8812262-0.663-0.0053Yes
150Ifi2712308-0.6940.0108Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE