DatasetMast.Mast_Pheno.cls
#Group6_versus_Group8.Mast_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeMast_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class4
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)0.27016586
Normalized Enrichment Score (NES)1.1795366
Nominal p-value0.16481481
FDR q-value0.6487579
FWER p-Value0.934
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Rtp4720.8900.0271Yes
2Calcrl2310.7110.0406Yes
3Tnfrsf1b2320.7090.0669Yes
4Rnf144b2910.6700.0870Yes
5Klf63830.6190.1025Yes
6Gna156150.5490.1041Yes
7Myc6920.5220.1173Yes
8Atp2c17490.5020.1314Yes
9Psen19120.4620.1353Yes
10Ifnar19180.4610.1520Yes
11Ahr11860.4260.1461Yes
12Axl13730.4030.1460Yes
13P2rx714470.3910.1545Yes
14Rhog15100.3820.1636Yes
15Il18r115940.3670.1705Yes
16Btg216070.3640.1830Yes
17Irak216660.3570.1915Yes
18Il15ra17370.3460.1987Yes
19Nfkb117590.3440.2097Yes
20Rgs118040.3370.2187Yes
21Mxd119440.3210.2193Yes
22Lpar119770.3180.2285Yes
23Slc11a219960.3170.2387Yes
24P2ry220510.3110.2459Yes
25Sri22750.2880.2385Yes
26Irf123380.2830.2439Yes
27Osm24210.2770.2475Yes
28Sgms224670.2740.2540Yes
29Il18rap25470.2680.2576Yes
30Gch125920.2670.2639Yes
31Ptpre26620.2600.2679Yes
32Slc28a229400.2410.2544Yes
33Kif1b29780.2380.2602Yes
34Icam130050.2360.2669Yes
35Pik3r530700.2300.2702Yes
36Plaur31900.2240.2688No
37Kcna335820.1880.2441No
38Bst236020.1870.2495No
39P2rx436720.1810.2506No
40Fzd539440.1610.2346No
41Lyn40140.1560.2348No
42Tapbp40520.1530.2374No
43Cdkn1a42520.1370.2264No
44Cd8243160.1320.2261No
45Il1r145850.1100.2085No
46Csf3r45870.1100.2125No
47Acvr1b47900.0940.1996No
48Cd6950210.0770.1838No
49Il4ra50720.0730.1824No
50Rela53240.0540.1641No
51Tnfsf1056530.0320.1387No
52Ripk258690.0160.1218No
53Cd4858810.0150.1215No
54Sphk160480.0050.1082No
55Ptger461690.0000.0985No
56Gpc362100.0000.0953No
57Cmklr16430-0.0050.0777No
58Emp36501-0.0090.0723No
59Rasgrp16502-0.0090.0727No
60Slamf16691-0.0220.0583No
61Sell6730-0.0240.0561No
62Irf76781-0.0260.0530No
63Slc7a16844-0.0300.0491No
64Aqp96862-0.0310.0488No
65Itgb36870-0.0310.0494No
66Ccrl26886-0.0320.0494No
67Itga57245-0.0560.0225No
68Hpn7324-0.0590.0183No
69Atp2b17487-0.0680.0077No
70Ifitm18023-0.106-0.0317No
71Il68050-0.108-0.0298No
72Ly6e8184-0.117-0.0363No
73Gabbr18191-0.117-0.0324No
74Gpr1838193-0.118-0.0281No
75Pde4b8246-0.122-0.0279No
76Nampt8256-0.123-0.0240No
77Raf18385-0.132-0.0295No
78Hif1a8469-0.138-0.0312No
79Dcbld28633-0.149-0.0389No
80Sema4d8799-0.162-0.0463No
81Ffar28878-0.168-0.0464No
82Gnai38908-0.170-0.0424No
83Eif2ak29000-0.178-0.0432No
84Cybb9013-0.179-0.0375No
85Csf19079-0.184-0.0360No
86Abca19346-0.204-0.0500No
87Atp2a29439-0.212-0.0496No
88Mmp149496-0.217-0.0461No
89Gpr1329528-0.220-0.0405No
90Abi19762-0.241-0.0504No
91Nfkbia9859-0.248-0.0490No
92Nmi9882-0.249-0.0416No
93Pvr9931-0.253-0.0361No
94Lcp29958-0.256-0.0287No
95Icam410070-0.266-0.0279No
96Il1810175-0.267-0.0264No
97Slc31a210186-0.267-0.0173No
98Adrm110589-0.308-0.0385No
99Selenos10915-0.342-0.0522No
100Slc31a110981-0.349-0.0445No
101Ldlr11041-0.355-0.0362No
102Il10ra11301-0.390-0.0427No
103Il1511736-0.465-0.0607No
104Pcdh711946-0.511-0.0587No
105Gp1ba11961-0.518-0.0407No
106Met12205-0.620-0.0374No
107Acvr2a12265-0.665-0.0176No
108Ifngr212406-0.8570.0028No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE