Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group6_versus_Group8.Mast_Pheno.cls #Group6_versus_Group8_repos
Phenotype	Mast_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.18195024
Normalized Enrichment Score (NES)	-0.8161957
Nominal p-value	0.8072289
FDR q-value	0.9002218
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ctsb	104	0.835	0.0202	No
2	Fdx1	191	0.739	0.0385	No
3	Ctsl	418	0.613	0.0412	No
4	Xpnpep1	469	0.592	0.0574	No
5	Spock2	548	0.571	0.0706	No
6	Pfn1	636	0.540	0.0821	No
7	Rce1	660	0.531	0.0984	No
8	Sh2b3	840	0.476	0.1002	No
9	Psen1	912	0.462	0.1103	No
10	Lamp2	970	0.454	0.1212	No
11	Psmb9	1040	0.444	0.1308	No
12	Dusp6	1239	0.417	0.1290	No
13	Kcnip2	1272	0.413	0.1406	No
14	Rhog	1510	0.382	0.1344	No
15	Stx4a	1571	0.371	0.1423	No
16	Dgkg	1724	0.348	0.1419	No
17	Rbsn	1729	0.347	0.1534	No
18	Brpf3	1958	0.320	0.1459	No
19	Csrp1	2107	0.305	0.1443	No
20	S100a9	2273	0.289	0.1408	No
21	Irf1	2338	0.283	0.1453	No
22	C3	2455	0.274	0.1453	No
23	Serpinc1	2549	0.268	0.1470	No
24	Zeb1	2651	0.261	0.1477	No
25	Prdm4	2775	0.254	0.1464	No
26	Cr2	2796	0.253	0.1535	No
27	Prcp	3011	0.235	0.1442	No
28	Dyrk2	3019	0.234	0.1516	No
29	Pik3r5	3070	0.230	0.1554	No
30	Cdh13	3106	0.228	0.1604	No
31	Plaur	3190	0.224	0.1614	No
32	Gnai2	3314	0.213	0.1587	No
33	Dpp4	3527	0.193	0.1481	No
34	Gmfb	3545	0.192	0.1533	No
35	Gng2	3557	0.191	0.1589	No
36	Ctsd	3593	0.188	0.1625	No
37	Calm1	3734	0.177	0.1572	No
38	Lta4h	3751	0.176	0.1620	No
39	Gnb4	3882	0.166	0.1571	No
40	Prkcd	3923	0.163	0.1594	No
41	Lyn	4014	0.156	0.1575	No
42	Pla2g4a	4063	0.151	0.1588	No
43	Lipa	4123	0.147	0.1590	No
44	Gzmb	4224	0.139	0.1557	No
45	Cblb	4432	0.122	0.1431	No
46	Gata3	4821	0.092	0.1147	No
47	Casp9	4856	0.090	0.1150	No
48	Lap3	4924	0.084	0.1125	No
49	Ctsc	4958	0.081	0.1126	No
50	Pim1	4961	0.081	0.1152	No
51	Casp4	4989	0.079	0.1157	No
52	Dock9	5050	0.075	0.1134	No
53	Lgals3	5064	0.074	0.1149	No
54	Adam9	5082	0.072	0.1160	No
55	Cpq	5177	0.066	0.1106	No
56	Irf2	5514	0.041	0.0848	No
57	Tnfaip3	5520	0.040	0.0857	No
58	Rnf4	5660	0.032	0.0755	No
59	Ppp2cb	5781	0.022	0.0666	No
60	Fyn	5828	0.019	0.0635	No
61	Ctso	6084	0.002	0.0429	No
62	Dock4	6162	0.000	0.0366	No
63	Casp1	6370	-0.002	0.0199	No
64	Pdp1	6418	-0.004	0.0162	No
65	Rasgrp1	6502	-0.009	0.0098	No
66	F8	6624	-0.017	0.0006	No
67	Gpd2	6654	-0.019	-0.0011	No
68	Calm3	6764	-0.025	-0.0091	No
69	Anxa5	6780	-0.026	-0.0094	No
70	Irf7	6781	-0.026	-0.0085	No
71	Kif2a	6792	-0.027	-0.0084	No
72	Rabif	6859	-0.031	-0.0127	No
73	Grb2	7052	-0.043	-0.0268	No
74	Was	7225	-0.054	-0.0389	No
75	Dusp5	7267	-0.057	-0.0403	No
76	Plek	7363	-0.060	-0.0459	No
77	Msrb1	7403	-0.063	-0.0469	No
78	Fcer1g	7695	-0.083	-0.0677	No
79	Usp14	7957	-0.101	-0.0854	No
80	S100a13	8048	-0.108	-0.0890	No
81	Il6	8050	-0.108	-0.0854	No
82	Jak2	8162	-0.115	-0.0905	No
83	Raf1	8385	-0.132	-0.1040	No
84	Pik3cg	8495	-0.139	-0.1081	No
85	Src	8524	-0.142	-0.1055	No
86	Dock10	8611	-0.148	-0.1074	No
87	Gnai3	8908	-0.170	-0.1255	No
88	Cd46	8961	-0.175	-0.1237	No
89	Casp3	9060	-0.182	-0.1255	No
90	Mmp14	9496	-0.217	-0.1533	No
91	Plscr1	9604	-0.226	-0.1542	No
92	C2	9847	-0.248	-0.1654	No
93	Lcp2	9958	-0.256	-0.1655	No
94	Usp15	9979	-0.257	-0.1583	No
95	Sirt6	10033	-0.262	-0.1536	No
96	Gngt2	10174	-0.267	-0.1558	No
97	Prep	10267	-0.272	-0.1540	No
98	Hspa5	10295	-0.275	-0.1467	No
99	Ppp4c	10509	-0.299	-0.1538	No
100	Usp16	10517	-0.299	-0.1441	No
101	Timp2	10677	-0.317	-0.1461	No
102	Phex	10718	-0.322	-0.1383	No
103	Car2	10936	-0.345	-0.1441	No
104	Pik3ca	11205	-0.376	-0.1530	No
105	Kcnip3	11563	-0.434	-0.1671	Yes
106	Casp7	11617	-0.448	-0.1560	Yes
107	Gca	11669	-0.455	-0.1446	Yes
108	Cdk5r1	11752	-0.466	-0.1353	Yes
109	Gp1ba	11961	-0.518	-0.1344	Yes
110	Gnb2	11975	-0.523	-0.1175	Yes
111	Vcpip1	12096	-0.569	-0.1078	Yes
112	Usp8	12256	-0.659	-0.0981	Yes
113	Ehd1	12327	-0.713	-0.0793	Yes
114	Itgam	12361	-0.766	-0.0558	Yes
115	Atox1	12367	-0.775	-0.0296	Yes
116	Akap10	12433	-1.037	0.0006	Yes