DatasetMast.Mast_Pheno.cls
#Group3_versus_Group4.Mast_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_UV_RESPONSE_DN
Enrichment Score (ES)0.23082669
Normalized Enrichment Score (NES)1.0455182
Nominal p-value0.38229376
FDR q-value0.70655024
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_UV_RESPONSE_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Apbb21750.7360.0149Yes
2Smad72050.7100.0406Yes
3Pten2940.6560.0594Yes
4Fyn2970.6530.0850Yes
5Atrn3950.6090.1012Yes
6Insig14820.5770.1170Yes
7Pex145240.5600.1359Yes
8Mapk147720.4910.1353Yes
9Ptpn218340.4780.1492Yes
10Ddah111310.4210.1418Yes
11Anxa211980.4150.1529Yes
12Add314230.3830.1499Yes
13Rasa214470.3790.1630Yes
14Mgmt14780.3730.1753Yes
15Adgrl215900.3540.1803Yes
16Pdlim516740.3440.1872Yes
17Slc22a1818210.3240.1882Yes
18Atp2c118880.3170.1953Yes
19Atrx20180.3000.1967Yes
20Tgfbr220250.2990.2080Yes
21Notch221120.2920.2126Yes
22Igf1r22750.2740.2103Yes
23Ltbp123420.2680.2155Yes
24Acvr2a25740.2490.2066Yes
25Ica127180.2340.2043Yes
26Bmpr1a28030.2270.2065Yes
27Nrp128050.2270.2154Yes
28Gja128150.2270.2237Yes
29Wdr3729330.2170.2228Yes
30Dyrk1a29400.2170.2308Yes
31Lamc131940.2000.2182No
32Celf235170.1710.1989No
33Bckdhb36440.1610.1951No
34Togaram136480.1610.2012No
35Cited237340.1540.2004No
36Mgll37710.1510.2034No
37Pik3cd40580.1290.1853No
38Abcc140880.1280.1880No
39Tgfbr342690.1130.1779No
40Vav244730.1000.1654No
41Slc7a146490.0880.1547No
42Atp2b447680.0800.1483No
43Cap248590.0730.1438No
44Rbpms48970.0700.1436No
45Rxra49280.0680.1438No
46Prdm250030.0630.1403No
47Prkce50380.0610.1400No
48Sdc250780.0580.1391No
49Pias351740.0510.1334No
50Nfkb152730.0460.1273No
51Tfpi53350.0410.1240No
52Vldlr54700.0330.1145No
53Cdkn1b54830.0330.1148No
54Plcb457260.0180.0959No
55Spop57550.0160.0942No
56Mios58170.0120.0898No
57Inpp4b58360.0110.0887No
58Bhlhe4060200.0000.0739No
59Dusp16098-0.0010.0677No
60Cdk136195-0.0060.0602No
61Met6314-0.0140.0512No
62Atp2b16398-0.0190.0452No
63Zmiz16780-0.0430.0160No
64Nipbl6783-0.0430.0175No
65Mta16854-0.0480.0137No
66Phf36875-0.0490.0140No
67Sipa1l17107-0.063-0.0022No
68Dlg17188-0.067-0.0060No
69Arhgef97194-0.068-0.0037No
70Aggf17273-0.073-0.0072No
71Pik3r37702-0.100-0.0379No
72Syne17759-0.105-0.0383No
73Scaf88117-0.129-0.0622No
74Sfmbt18170-0.132-0.0612No
75Akt38328-0.143-0.0682No
76Ythdc18358-0.145-0.0649No
77Lpar18531-0.156-0.0726No
78Itgb38559-0.160-0.0685No
79Dmac2l8808-0.177-0.0816No
80Prkar2b8987-0.191-0.0885No
81Nfib9020-0.193-0.0835No
82Tent4a9040-0.195-0.0773No
83Kalrn9145-0.202-0.0777No
84Sri9310-0.215-0.0825No
85Mrps319331-0.217-0.0756No
86Tjp19383-0.220-0.0710No
87Atxn19387-0.220-0.0626No
88Synj29464-0.226-0.0598No
89Prkca9575-0.231-0.0596No
90Ldlr9647-0.237-0.0560No
91Magi29988-0.266-0.0730No
92Dbp10005-0.267-0.0638No
93Cacna1a10691-0.332-0.1062No
94Smad310695-0.333-0.0933No
95Grk510699-0.334-0.0803No
96Kit10841-0.350-0.0779No
97Anxa410945-0.361-0.0720No
98Map2k511037-0.374-0.0646No
99Myc11490-0.438-0.0839No
100Pdgfrb11500-0.441-0.0672No
101Nr3c111678-0.476-0.0628No
102Cdon11719-0.483-0.0469No
103Gcnt111818-0.500-0.0351No
104Nr1d211882-0.527-0.0194No
105Runx111906-0.537-0.0001No
106Cdc42bpa11926-0.5430.0198No
107Nek711960-0.5520.0390No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_UV_RESPONSE_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_UV_RESPONSE_DN: Random ES distribution   
Gene set null distribution of ES for HALLMARK_UV_RESPONSE_DN