Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group3_versus_Group4.Mast_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.21301411
Normalized Enrichment Score (NES)	0.88785774
Nominal p-value	0.6441281
FDR q-value	0.93047196
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Sat1	50	0.914	0.0230	Yes
2	Tnip1	192	0.722	0.0330	Yes
3	Tnfaip2	233	0.692	0.0502	Yes
4	Ets2	288	0.662	0.0654	Yes
5	Lamb3	368	0.619	0.0774	Yes
6	Ninj1	403	0.608	0.0926	Yes
7	Birc3	441	0.593	0.1072	Yes
8	Mxd1	451	0.591	0.1240	Yes
9	B4galt1	502	0.567	0.1367	Yes
10	Fos	708	0.504	0.1350	Yes
11	Snn	783	0.489	0.1435	Yes
12	Marcks	971	0.455	0.1418	Yes
13	Slc16a6	1042	0.437	0.1491	Yes
14	Plek	1097	0.426	0.1573	Yes
15	Nfkb2	1175	0.416	0.1634	Yes
16	Zbtb10	1176	0.416	0.1757	Yes
17	Pnrc1	1177	0.416	0.1881	Yes
18	Fosb	1210	0.412	0.1977	Yes
19	Rela	1316	0.398	0.2010	Yes
20	Nfat5	1453	0.377	0.2011	Yes
21	Irs2	1533	0.364	0.2055	Yes
22	Pdlim5	1674	0.344	0.2043	Yes
23	Nfkbie	1786	0.330	0.2051	Yes
24	Plaur	1913	0.313	0.2041	Yes
25	Csf1	2055	0.297	0.2015	Yes
26	Irf1	2114	0.291	0.2054	Yes
27	Cflar	2127	0.290	0.2130	Yes
28	Ier3	2412	0.265	0.1978	No
29	Rnf19b	2436	0.263	0.2037	No
30	Tgif1	2485	0.258	0.2075	No
31	Nampt	2792	0.228	0.1894	No
32	Nfe2l2	2885	0.221	0.1885	No
33	Tnf	2977	0.214	0.1875	No
34	Cd44	3092	0.208	0.1844	No
35	Bcl3	3131	0.205	0.1874	No
36	Ppp1r15a	3199	0.199	0.1878	No
37	Pde4b	3314	0.189	0.1842	No
38	Il6st	3431	0.180	0.1801	No
39	Klf9	3489	0.174	0.1806	No
40	Tank	4011	0.133	0.1423	No
41	Btg1	4104	0.126	0.1385	No
42	Panx1	4357	0.108	0.1213	No
43	Mcl1	4369	0.108	0.1236	No
44	Dram1	4456	0.102	0.1196	No
45	Rhob	4673	0.085	0.1046	No
46	Rigi	4740	0.081	0.1016	No
47	Btg3	4794	0.078	0.0996	No
48	Kdm6b	4935	0.068	0.0903	No
49	Trip10	4947	0.067	0.0914	No
50	Nfkb1	5273	0.046	0.0663	No
51	Eif1	5360	0.039	0.0605	No
52	Yrdc	5486	0.033	0.0514	No
53	Tap1	5663	0.021	0.0377	No
54	Tubb2a	5728	0.017	0.0330	No
55	B4galt5	5797	0.013	0.0279	No
56	Id2	5813	0.012	0.0270	No
57	Clcf1	5844	0.011	0.0249	No
58	Vegfa	6012	0.000	0.0113	No
59	Bhlhe40	6020	0.000	0.0108	No
60	Dusp5	6086	-0.001	0.0055	No
61	Dusp1	6098	-0.001	0.0047	No
62	Gem	6149	-0.003	0.0007	No
63	Klf10	6279	-0.011	-0.0095	No
64	Ripk2	6397	-0.019	-0.0184	No
65	Atp2b1	6398	-0.019	-0.0178	No
66	Ptpre	6407	-0.020	-0.0179	No
67	Ier5	6506	-0.026	-0.0251	No
68	Tsc22d1	6554	-0.028	-0.0280	No
69	Ehd1	6626	-0.033	-0.0328	No
70	Nfkbia	6649	-0.035	-0.0336	No
71	Dennd5a	6956	-0.053	-0.0568	No
72	Rcan1	6966	-0.054	-0.0560	No
73	Pfkfb3	7017	-0.057	-0.0583	No
74	Slc2a6	7076	-0.061	-0.0612	No
75	Ptger4	7276	-0.073	-0.0752	No
76	Bcl6	7333	-0.076	-0.0775	No
77	Dusp2	7436	-0.083	-0.0834	No
78	Map2k3	7471	-0.084	-0.0836	No
79	Ifngr2	7491	-0.086	-0.0826	No
80	Litaf	7506	-0.087	-0.0812	No
81	Rel	7731	-0.103	-0.0963	No
82	Relb	7865	-0.113	-0.1038	No
83	Il18	7935	-0.117	-0.1059	No
84	Hes1	8050	-0.124	-0.1115	No
85	Sqstm1	8064	-0.126	-0.1088	No
86	Fosl2	8210	-0.135	-0.1166	No
87	Sphk1	8278	-0.139	-0.1179	No
88	Stat5a	8379	-0.146	-0.1217	No
89	Sgk1	8619	-0.164	-0.1363	No
90	Btg2	8796	-0.177	-0.1453	No
91	Sod2	9129	-0.201	-0.1663	No
92	Dnajb4	9201	-0.206	-0.1660	No
93	Slc2a3	9350	-0.217	-0.1715	No
94	Per1	9460	-0.226	-0.1737	No
95	Ccrl2	9563	-0.230	-0.1752	No
96	Zc3h12a	9570	-0.231	-0.1688	No
97	Ldlr	9647	-0.237	-0.1679	No
98	Tnfaip8	9757	-0.246	-0.1695	No
99	Tiparp	9919	-0.260	-0.1749	No
100	Ifih1	9946	-0.263	-0.1692	No
101	Klf6	10029	-0.269	-0.1679	No
102	Cdkn1a	10046	-0.270	-0.1612	No
103	Fut4	10215	-0.284	-0.1664	No
104	Tnfaip3	10492	-0.310	-0.1796	No
105	Junb	10648	-0.329	-0.1824	No
106	Smad3	10695	-0.333	-0.1763	No
107	Pmepa1	10838	-0.350	-0.1775	No
108	Tnip2	10894	-0.355	-0.1714	No
109	Ier2	10956	-0.363	-0.1656	No
110	Nr4a2	11159	-0.391	-0.1704	No
111	Il6	11166	-0.392	-0.1593	No
112	Jun	11222	-0.399	-0.1519	No
113	Abca1	11458	-0.433	-0.1582	No
114	Myc	11490	-0.438	-0.1477	No
115	Gfpt2	11754	-0.491	-0.1545	No
116	Gch1	11927	-0.543	-0.1524	No
117	Egr1	11934	-0.545	-0.1367	No
118	Ifit2	12085	-0.605	-0.1310	No
119	Birc2	12127	-0.626	-0.1157	No
120	Gpr183	12171	-0.641	-0.1002	No
121	Gadd45a	12217	-0.676	-0.0839	No
122	Il15ra	12242	-0.692	-0.0653	No
123	Icam1	12340	-0.803	-0.0494	No
124	Cd69	12399	-0.948	-0.0260	No
125	Ccnl1	12409	-0.990	0.0026	No