Details for gene set HALLMARK_TGF_BETA

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group3_versus_Group4.Mast_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)	0.17926991
Normalized Enrichment Score (NES)	0.7297783
Nominal p-value	0.904943
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Smad7	205	0.710	0.0584	Yes
2	Furin	580	0.544	0.0856	Yes
3	Skil	673	0.513	0.1323	Yes
4	Hipk2	1116	0.422	0.1412	Yes
5	Slc20a1	1794	0.328	0.1212	Yes
6	Bmpr2	2454	0.261	0.0955	Yes
7	Tgif1	2485	0.258	0.1204	Yes
8	Map3k7	2545	0.252	0.1422	Yes
9	Bmpr1a	2803	0.227	0.1455	Yes
10	Trim33	2898	0.220	0.1611	Yes
11	Eng	3176	0.201	0.1600	Yes
12	Ppp1r15a	3199	0.199	0.1793	Yes
13	Ski	3471	0.175	0.1759	No
14	Sptbn1	3852	0.146	0.1606	No
15	Fkbp1a	4343	0.109	0.1326	No
16	Rab31	4926	0.068	0.0928	No
17	Cdh1	5199	0.049	0.0761	No
18	Smad1	5603	0.024	0.0461	No
19	Xiap	5744	0.016	0.0366	No
20	Id2	5813	0.012	0.0324	No
21	Thbs1	6026	0.000	0.0153	No
22	Klf10	6279	-0.011	-0.0039	No
23	Ncor2	6320	-0.014	-0.0056	No
24	Acvr1	6411	-0.020	-0.0108	No
25	Ppp1ca	6828	-0.046	-0.0395	No
26	Apc	6971	-0.054	-0.0452	No
27	Tgfb1	7224	-0.069	-0.0582	No
28	Fnta	7245	-0.071	-0.0523	No
29	Ctnnb1	7456	-0.083	-0.0605	No
30	Ifngr2	7491	-0.086	-0.0542	No
31	Smad6	8407	-0.148	-0.1124	No
32	Smurf2	8465	-0.152	-0.1010	No
33	Ppm1a	8950	-0.188	-0.1202	No
34	Hdac1	8988	-0.191	-0.1030	No
35	Arid4b	9137	-0.201	-0.0937	No
36	Tjp1	9383	-0.220	-0.0902	No
37	Cdk9	9577	-0.232	-0.0813	No
38	Bcar3	10287	-0.292	-0.1077	No
39	Smurf1	10334	-0.296	-0.0802	No
40	Junb	10648	-0.329	-0.0708	No
41	Rhoa	10688	-0.332	-0.0389	No
42	Smad3	10695	-0.333	-0.0043	No
43	Pmepa1	10838	-0.350	0.0212	No
44	Ube2d3	10840	-0.350	0.0580	No
45	Tgfbr1	12212	-0.673	0.0185	No