DatasetMast.Mast_Pheno.cls
#Group3_versus_Group4.Mast_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.24139114
Normalized Enrichment Score (NES)-0.97096777
Nominal p-value0.47280335
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Vdac2191.0900.0229No
2Dlst550.9010.0402No
3Ndufa11640.7490.0482No
4Acadm1980.7170.0615No
5Pdhx3610.6200.0622No
6Tomm70a4120.6070.0717No
7Idh3a4690.5820.0802No
8Atp6v1c15580.5470.0853No
9Ndufb68620.4720.0711No
10Iscu9270.4640.0763No
11Ndufb89550.4590.0844No
12Mrpl1111130.4230.0810No
13Etfa13380.3950.0716No
14Lrpprc13890.3870.0762No
15Mrps2214790.3730.0773No
16Ndufab114840.3720.0853No
17Uqcr1015810.3560.0855No
18Tcirg116420.3470.0883No
19Mgst319740.3050.0682No
20Mtx220280.2990.0705No
21Ndufa720880.2930.0723No
22Mpc120890.2930.0789No
23Idh3g21680.2840.0789No
24Pmpca23330.2690.0715No
25Uqcrh24520.2610.0677No
26Suclg125790.2480.0630No
27Fh127040.2350.0582No
28Sucla227800.2300.0572No
29Cox1527910.2280.0615No
30Slc25a1228400.2270.0627No
31Uqcrq29000.2200.0628No
32Cox5a29260.2180.0657No
33Cox1130970.2080.0564No
34Hspa931290.2060.0585No
35Vdac333820.1840.0421No
36Cyb5r334120.1810.0438No
37Etfdh34370.1780.0458No
38Ech135290.1700.0422No
39Slc25a335450.1690.0448No
40Opa135640.1680.0471No
41Atp6v1f37400.1540.0362No
42Nqo238270.1470.0325No
43Mrps3038280.1470.0358No
44Timm938500.1460.0374No
45Cox1738650.1450.0395No
46Sdha40900.1270.0241No
47Ndufa641160.1250.0248No
48Mtrf141730.1220.0230No
49Grpel141830.1210.0250No
50Oxa1l41840.1210.0277No
51Mfn242180.1170.0276No
52Decr143900.1060.0160No
53Oat44130.1050.0166No
54Pdha144340.1040.0173No
55Mtrr44430.1030.0189No
56Aldh6a145470.0950.0127No
57Mrpl3545530.0950.0144No
58Ndufs647520.0810.0000No
59Ndufv148340.074-0.0049No
60Echs148820.071-0.0071No
61Slc25a1151140.056-0.0247No
62Pdp153660.039-0.0443No
63Htra254020.037-0.0463No
64Timm1055060.031-0.0540No
65Dld55440.028-0.0564No
66Fxn55890.025-0.0595No
67Ndufa956080.024-0.0604No
68Mrps1156160.023-0.0604No
69Ndufs757120.018-0.0678No
70Cox8a57900.014-0.0737No
71Hccs58800.007-0.0808No
72Phb259100.006-0.0831No
73Rhot159280.005-0.0844No
74Uqcrb6140-0.003-0.1015No
75Hadha6240-0.009-0.1094No
76Timm136414-0.021-0.1230No
77Phyh6432-0.022-0.1239No
78Atp1b16500-0.026-0.1288No
79Acaa1a6615-0.032-0.1373No
80Cox6a16690-0.038-0.1425No
81Cyb5a6802-0.044-0.1506No
82Polr2f6908-0.051-0.1580No
83Hadhb6929-0.052-0.1585No
84Ndufc16976-0.055-0.1610No
85Cox6b17002-0.056-0.1618No
86Uqcrfs17031-0.058-0.1628No
87Ndufs27115-0.064-0.1681No
88Atp6v1g17120-0.064-0.1670No
89Ndufa47131-0.064-0.1664No
90Acadsb7140-0.065-0.1656No
91Ndufs47214-0.069-0.1700No
92Ndufa27308-0.075-0.1759No
93Dlat7315-0.075-0.1747No
94Idh17362-0.078-0.1767No
95Pdhb7373-0.078-0.1758No
96Mdh17392-0.080-0.1755No
97Atp6v1h7409-0.081-0.1750No
98Atp6v0b7479-0.084-0.1787No
99Atp6v1d7488-0.085-0.1774No
100Ndufs17583-0.091-0.1831No
101Cox7b7691-0.100-0.1895No
102Mrpl347823-0.110-0.1978No
103Idh3b7882-0.114-0.2000No
104Nnt7964-0.119-0.2039No
105Ndufb27994-0.121-0.2036No
106Bckdha8027-0.123-0.2034No
107Mrpl158132-0.130-0.2090No
108Ogdh8175-0.132-0.2094No
109Cox7c8316-0.143-0.2177No
110Surf18392-0.147-0.2205No
111Atp6ap18485-0.153-0.2245No
112Vdac18600-0.163-0.2302No
113Idh28688-0.170-0.2335No
114Mrps158786-0.176-0.2375Yes
115Mdh28795-0.176-0.2342Yes
116Ndufs38812-0.178-0.2315Yes
117Atp6v1e18813-0.178-0.2275Yes
118Cs8891-0.184-0.2297Yes
119Ndufb78986-0.191-0.2330Yes
120Gpi19034-0.194-0.2325Yes
121Timm509052-0.196-0.2295Yes
122Cox5b9096-0.199-0.2286Yes
123Acadvl9208-0.207-0.2330Yes
124Cox7a2l9282-0.213-0.2342Yes
125Retsat9325-0.216-0.2328Yes
126Atp6v0e9347-0.217-0.2296Yes
127Alas19429-0.223-0.2312Yes
128Slc25a59455-0.225-0.2282Yes
129Aifm19456-0.225-0.2232Yes
130Sdhc9567-0.231-0.2270Yes
131Gpx49587-0.233-0.2233Yes
132Ndufc29591-0.233-0.2183Yes
133Ndufs89741-0.245-0.2250Yes
134Aco29754-0.246-0.2205Yes
135Ndufa89764-0.246-0.2157Yes
136Casp79810-0.251-0.2137Yes
137Cox109822-0.251-0.2090Yes
138Slc25a49894-0.258-0.2090Yes
139Tomm229941-0.262-0.2069Yes
140Uqcrc110001-0.267-0.2057Yes
141Atp5pb10002-0.267-0.1997Yes
142Atp6v0c10240-0.286-0.2126Yes
143Sdhd10273-0.291-0.2087Yes
144Uqcr1110291-0.293-0.2036Yes
145Sdhb10433-0.303-0.2083Yes
146Por10526-0.313-0.2088Yes
147Glud110676-0.331-0.2135Yes
148Acat110692-0.332-0.2073Yes
149Cyc110698-0.333-0.2002Yes
150Immt10730-0.337-0.1952Yes
151Rhot210795-0.344-0.1927Yes
152Etfb10815-0.347-0.1865Yes
153Ndufb510915-0.357-0.1865Yes
154Cox4i110932-0.359-0.1798Yes
155Ndufb311033-0.373-0.1796Yes
156Cpt1a11067-0.379-0.1738Yes
157Uqcrc211107-0.383-0.1684Yes
158Got211147-0.390-0.1628Yes
159Afg3l211225-0.400-0.1602Yes
160Timm17a11336-0.419-0.1598Yes
161Slc25a2011412-0.429-0.1563Yes
162Prdx311522-0.445-0.1552Yes
163Mrps1211554-0.450-0.1476Yes
164Timm8b11720-0.483-0.1503Yes
165Ndufv211827-0.503-0.1476Yes
166Ldha12054-0.585-0.1530Yes
167Ndufa512080-0.602-0.1415Yes
168Bax12153-0.633-0.1332Yes
169Cox7a212156-0.635-0.1191Yes
170Abcb712161-0.638-0.1052Yes
171Ndufa312195-0.660-0.0931Yes
172Cox6c12196-0.660-0.0783Yes
173Supv3l112216-0.675-0.0647Yes
174Hsd17b1012238-0.689-0.0510Yes
175Acaa212359-0.837-0.0420Yes
176Fdx112373-0.868-0.0237Yes
177Eci112439-1.3000.0002Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION