DatasetMast.Mast_Pheno.cls
#Group3_versus_Group4.Mast_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)-0.26247087
Normalized Enrichment Score (NES)-1.0086302
Nominal p-value0.4713376
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Pik3r5490.9180.0259No
2Rnf144b850.8480.0507No
3Kif1b1300.7800.0726No
4Gp1ba1490.7590.0958No
5Mxd14510.5910.0907No
6Irf76260.5280.0938No
7Pcdh77260.5010.1021No
8Itga58740.4710.1055No
9Slc31a29790.4540.1118No
10Ffar29940.4510.1254No
11Dcbld210790.4290.1326No
12Rela13160.3980.1264No
13Eif2ak213430.3940.1371No
14Cybb14000.3860.1451No
15Sema4d17840.3300.1248No
16Atp2c118880.3170.1268No
17Plaur19130.3130.1351No
18Gpc319160.3130.1451No
19Acvr1b20000.3020.1482No
20Csf120550.2970.1535No
21Irf121140.2910.1583No
22Ly6e23670.2670.1466No
23Acvr2a25740.2490.1380No
24Nampt27920.2280.1278No
25P2rx730810.2090.1113No
26Bst230880.2080.1176No
27Icam431650.2020.1180No
28Mmp1431710.2020.1242No
29Pde4b33140.1890.1188No
30Gabbr133630.1850.1210No
31Slc28a234300.1800.1215No
32Osm38080.1490.0957No
33Aqp942040.1190.0676No
34Adrm142110.1180.0709No
35Atp2a242390.1160.0725No
36Il1543050.1110.0709No
37Slc7a146490.0880.0459No
38Nmi46700.0860.0471No
39Slc31a147230.0820.0455No
40Slc11a250010.0630.0251No
41Nfkb152730.0460.0047No
42Cd4856700.020-0.0268No
43Rhog58910.006-0.0444No
44Sgms260360.000-0.0561No
45P2rx46083-0.000-0.0598No
46Gna156146-0.003-0.0647No
47Cmklr16210-0.007-0.0696No
48Pvr6269-0.010-0.0740No
49Tapbp6270-0.010-0.0736No
50Met6314-0.014-0.0767No
51Ripk26397-0.019-0.0827No
52Atp2b16398-0.019-0.0821No
53Ptpre6407-0.020-0.0821No
54Psen16623-0.033-0.0984No
55Emp36627-0.033-0.0976No
56Nfkbia6649-0.035-0.0982No
57Gpr1326696-0.038-0.1007No
58Cd826711-0.039-0.1005No
59Abi17181-0.067-0.1364No
60Ptger47276-0.073-0.1416No
61Ifngr27491-0.086-0.1562No
62Slamf17497-0.086-0.1538No
63Il18r17770-0.105-0.1724No
64Ifnar17855-0.112-0.1755No
65Il187935-0.117-0.1781No
66Rtp47939-0.117-0.1746No
67Lcp27955-0.118-0.1719No
68Rgs18169-0.132-0.1849No
69Sphk18278-0.139-0.1891No
70Lpar18531-0.156-0.2045No
71Rasgrp18558-0.159-0.2014No
72Itgb38559-0.160-0.1962No
73Btg28796-0.177-0.2096No
74Ahr8929-0.187-0.2142No
75Sri9310-0.215-0.2380No
76Lyn9408-0.222-0.2386No
77Kcna39527-0.227-0.2408No
78Ccrl29563-0.230-0.2361No
79Ldlr9647-0.237-0.2351No
80Il18rap9969-0.264-0.2525Yes
81Klf610029-0.269-0.2485Yes
82Cdkn1a10046-0.270-0.2410Yes
83Sell10077-0.273-0.2346Yes
84Il1r110116-0.276-0.2287Yes
85Hpn10133-0.278-0.2209Yes
86Calcrl10481-0.309-0.2390Yes
87Il10ra10733-0.337-0.2484Yes
88Ifitm110866-0.352-0.2476Yes
89Raf111001-0.369-0.2465Yes
90Il611166-0.392-0.2470Yes
91Fzd511358-0.422-0.2487Yes
92Abca111458-0.433-0.2427Yes
93Myc11490-0.438-0.2309Yes
94Gnai311728-0.485-0.2343Yes
95Hif1a11834-0.506-0.2263Yes
96Axl11851-0.513-0.2109Yes
97Irak211859-0.515-0.1947Yes
98P2ry211871-0.521-0.1786Yes
99Selenos11908-0.538-0.1640Yes
100Gch111927-0.543-0.1478Yes
101Il4ra11944-0.547-0.1313Yes
102Tnfrsf1b11954-0.551-0.1140Yes
103Gpr18312171-0.641-0.1107Yes
104Il15ra12242-0.692-0.0938Yes
105Csf3r12303-0.753-0.0741Yes
106Icam112340-0.803-0.0509Yes
107Tnfsf1012367-0.861-0.0250Yes
108Cd6912399-0.9480.0034Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE