Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group3_versus_Group4.Mast_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_GLYCOLYSIS
Enrichment Score (ES)	-0.21341573
Normalized Enrichment Score (NES)	-1.006459
Nominal p-value	0.41263157
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gusb	72	0.863	0.0193	No
2	Mpi	228	0.695	0.0269	No
3	B4galt1	502	0.567	0.0212	No
4	Pdk3	582	0.543	0.0305	No
5	Phka2	621	0.530	0.0429	No
6	Ankzf1	737	0.498	0.0480	No
7	B3galt6	1046	0.436	0.0357	No
8	Pcx	1205	0.414	0.0349	No
9	Gys1	1260	0.407	0.0423	No
10	Gne	1268	0.406	0.0536	No
11	Stmn1	1353	0.393	0.0582	No
12	Pgls	1412	0.385	0.0647	No
13	Irs2	1533	0.364	0.0655	No
14	Slc37a4	1625	0.350	0.0683	No
15	Gnpda1	1680	0.344	0.0739	No
16	Xylt2	1692	0.343	0.0830	No
17	Angptl4	1745	0.336	0.0885	No
18	Ecd	1757	0.334	0.0973	No
19	Gpc3	1916	0.313	0.0936	No
20	Sod1	1938	0.311	0.1009	No
21	Paxip1	1956	0.308	0.1085	No
22	B4galt7	1973	0.305	0.1161	No
23	Slc25a13	2081	0.294	0.1159	No
24	Pam	2133	0.288	0.1202	No
25	Mif	2191	0.282	0.1238	No
26	Spag4	2203	0.281	0.1310	No
27	Cln6	2358	0.268	0.1263	No
28	Ier3	2412	0.265	0.1297	No
29	Fut8	2719	0.234	0.1116	No
30	Cog2	2762	0.231	0.1149	No
31	Ndufv3	2888	0.221	0.1112	No
32	Capn5	2913	0.219	0.1156	No
33	Slc25a10	3074	0.210	0.1087	No
34	Cd44	3092	0.208	0.1134	No
35	Bpnt1	3159	0.203	0.1139	No
36	Ugp2	3338	0.188	0.1049	No
37	Aldh7a1	3526	0.170	0.0947	No
38	Cited2	3734	0.154	0.0823	No
39	Copb2	3759	0.152	0.0848	No
40	Ext2	3790	0.150	0.0867	No
41	Rpe	3871	0.145	0.0844	No
42	Ak3	3889	0.143	0.0872	No
43	Lhpp	4267	0.113	0.0598	No
44	Aurka	4453	0.102	0.0478	No
45	Chst12	4486	0.099	0.0480	No
46	Srd5a3	4621	0.090	0.0398	No
47	Arpp19	4802	0.077	0.0274	No
48	Egln3	4952	0.067	0.0172	No
49	Nsdhl	4963	0.066	0.0183	No
50	Galk2	5071	0.059	0.0113	No
51	Sdc2	5078	0.058	0.0125	No
52	Hax1	5137	0.054	0.0094	No
53	Polr3k	5168	0.052	0.0084	No
54	Prps1	5392	0.037	-0.0086	No
55	Pgm2	5418	0.036	-0.0096	No
56	Vldlr	5470	0.033	-0.0128	No
57	Dld	5544	0.028	-0.0179	No
58	Med24	5673	0.020	-0.0277	No
59	Nasp	5696	0.019	-0.0289	No
60	Tpi1	5710	0.018	-0.0295	No
61	Ppp2cb	5872	0.008	-0.0423	No
62	Gmppa	5949	0.004	-0.0484	No
63	Hmmr	5958	0.003	-0.0490	No
64	Vcan	6010	0.000	-0.0531	No
65	Vegfa	6012	0.000	-0.0532	No
66	Alg1	6272	-0.010	-0.0740	No
67	Met	6314	-0.014	-0.0769	No
68	Ppia	6341	-0.016	-0.0786	No
69	Ero1a	6367	-0.018	-0.0801	No
70	Hdlbp	6401	-0.020	-0.0822	No
71	Pmm2	6456	-0.024	-0.0859	No
72	Fam162a	6590	-0.030	-0.0958	No
73	Cyb5a	6802	-0.044	-0.1117	No
74	Pygl	6807	-0.044	-0.1107	No
75	Agrn	6881	-0.049	-0.1152	No
76	Plod1	7110	-0.064	-0.1319	No
77	Gale	7164	-0.067	-0.1343	No
78	Idh1	7362	-0.078	-0.1481	No
79	Psmc4	7378	-0.079	-0.1470	No
80	Lct	7391	-0.080	-0.1456	No
81	Mdh1	7392	-0.080	-0.1433	No
82	Abcb6	7559	-0.090	-0.1542	No
83	Got1	7561	-0.090	-0.1517	No
84	Glce	7664	-0.098	-0.1571	No
85	Mxi1	7830	-0.110	-0.1673	No
86	Kif2a	7850	-0.112	-0.1656	No
87	Galk1	7943	-0.117	-0.1697	No
88	Agl	7944	-0.117	-0.1663	No
89	Chpf2	7997	-0.121	-0.1670	No
90	Pgk1	8171	-0.132	-0.1772	No
91	Plod2	8187	-0.133	-0.1745	No
92	Hs2st1	8215	-0.135	-0.1728	No
93	Chst1	8230	-0.136	-0.1700	No
94	Rbck1	8362	-0.145	-0.1764	No
95	Aldoa	8369	-0.146	-0.1726	No
96	Nanp	8408	-0.148	-0.1714	No
97	Sap30	8572	-0.160	-0.1800	No
98	Pfkfb1	8691	-0.170	-0.1847	No
99	Mdh2	8795	-0.176	-0.1879	No
100	Slc35a3	8943	-0.188	-0.1944	No
101	Gfpt1	9080	-0.198	-0.1997	No
102	Akr1a1	9250	-0.210	-0.2073	Yes
103	Pygb	9254	-0.211	-0.2014	Yes
104	Casp6	9273	-0.212	-0.1967	Yes
105	Ddit4	9340	-0.217	-0.1958	Yes
106	Kif20a	9422	-0.223	-0.1959	Yes
107	Aldh9a1	9428	-0.223	-0.1898	Yes
108	Cdk1	9469	-0.226	-0.1864	Yes
109	Col5a1	9474	-0.226	-0.1802	Yes
110	Pgam1	9559	-0.230	-0.1803	Yes
111	Sdhc	9567	-0.231	-0.1742	Yes
112	Idua	9673	-0.240	-0.1757	Yes
113	Me2	9691	-0.240	-0.1701	Yes
114	Hs6st2	9858	-0.255	-0.1762	Yes
115	Tgfa	9864	-0.256	-0.1692	Yes
116	Tpst1	10068	-0.272	-0.1778	Yes
117	Gpc1	10450	-0.305	-0.1999	Yes
118	Fkbp4	10477	-0.308	-0.1930	Yes
119	B3gat3	10493	-0.310	-0.1852	Yes
120	Hspa5	10524	-0.313	-0.1785	Yes
121	Pkm	10665	-0.330	-0.1803	Yes
122	Cxcr4	10737	-0.338	-0.1763	Yes
123	Ext1	10830	-0.349	-0.1736	Yes
124	Depdc1a	10957	-0.363	-0.1733	Yes
125	Zfp292	10996	-0.368	-0.1657	Yes
126	Gpc4	11015	-0.371	-0.1563	Yes
127	Got2	11147	-0.390	-0.1556	Yes
128	Txn1	11179	-0.394	-0.1467	Yes
129	Isg20	11347	-0.421	-0.1480	Yes
130	Hk2	11507	-0.442	-0.1481	Yes
131	Cenpa	11517	-0.444	-0.1359	Yes
132	P4ha1	11525	-0.446	-0.1235	Yes
133	Taldo1	11802	-0.498	-0.1315	Yes
134	Pfkp	11870	-0.521	-0.1218	Yes
135	Slc16a3	11881	-0.527	-0.1072	Yes
136	Qsox1	11936	-0.545	-0.0958	Yes
137	G6pdx	11943	-0.547	-0.0803	Yes
138	Gfus	12004	-0.566	-0.0687	Yes
139	Gmppb	12007	-0.569	-0.0524	Yes
140	Ldha	12054	-0.585	-0.0391	Yes
141	Homer1	12313	-0.771	-0.0376	Yes
142	Glrx	12337	-0.792	-0.0164	Yes
143	Gclc	12363	-0.852	0.0063	Yes