Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group3_versus_Group4.Mast_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.18157402
Normalized Enrichment Score (NES)	-0.8711524
Nominal p-value	0.81983805
FDR q-value	0.9904698
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Taf9	51	0.913	0.0239	No
2	Srsf6	383	0.616	0.0159	No
3	Nt5c3	431	0.599	0.0304	No
4	Nelfb	549	0.550	0.0378	No
5	Eloa	611	0.534	0.0492	No
6	Gtf2f1	676	0.512	0.0598	No
7	Poll	683	0.511	0.0749	No
8	Dgcr8	773	0.491	0.0828	No
9	Npr2	949	0.461	0.0827	No
10	Supt5	965	0.456	0.0955	No
11	Polr2j	974	0.454	0.1088	No
12	Taf10	1055	0.434	0.1156	No
13	Taf6	1229	0.410	0.1141	No
14	Ssrp1	1346	0.394	0.1168	No
15	Polr2d	1448	0.379	0.1202	No
16	Polr3c	1547	0.361	0.1233	No
17	Rae1	1592	0.354	0.1306	No
18	Pom121	1887	0.317	0.1164	No
19	Taf12	1932	0.312	0.1224	No
20	Umps	2065	0.295	0.1207	No
21	Gtf2a2	2113	0.292	0.1259	No
22	Clp1	2150	0.286	0.1317	No
23	Mpg	2194	0.281	0.1369	No
24	Cmpk2	2224	0.279	0.1431	No
25	Gtf2h3	2423	0.264	0.1351	No
26	Cant1	2453	0.261	0.1407	No
27	Polr2h	2588	0.247	0.1374	No
28	Nelfcd	2853	0.225	0.1229	No
29	Sf3a3	3057	0.211	0.1129	No
30	Pnp	3157	0.203	0.1110	No
31	Nt5c	3210	0.198	0.1129	No
32	Pde4b	3314	0.189	0.1103	No
33	Rfc4	3361	0.185	0.1123	No
34	Polr2a	3799	0.149	0.0813	No
35	Cox17	3865	0.145	0.0805	No
36	Ak3	3889	0.143	0.0830	No
37	Pole4	3895	0.142	0.0870	No
38	Rrm2b	3906	0.141	0.0905	No
39	Ercc2	4074	0.128	0.0809	No
40	Adrm1	4211	0.118	0.0734	No
41	Rpa2	4299	0.112	0.0698	No
42	Polh	4350	0.109	0.0691	No
43	Tk2	4373	0.107	0.0706	No
44	Nme4	4541	0.096	0.0599	No
45	Ell	4630	0.089	0.0555	No
46	Polr2c	4654	0.087	0.0563	No
47	Dctn4	4665	0.086	0.0581	No
48	Gtf2h5	4726	0.081	0.0558	No
49	Polr1c	4991	0.064	0.0363	No
50	Mpc2	5126	0.055	0.0271	No
51	Gtf2h1	5189	0.050	0.0236	No
52	Zfp707	5220	0.048	0.0226	No
53	Mrpl40	5358	0.040	0.0127	No
54	Hcls1	5431	0.035	0.0079	No
55	Usp11	5481	0.033	0.0049	No
56	Cstf3	5499	0.032	0.0045	No
57	Vps37b	5524	0.030	0.0035	No
58	Dguok	5540	0.029	0.0032	No
59	Snapc5	5596	0.025	-0.0005	No
60	Trp53	5633	0.023	-0.0028	No
61	Gmpr2	5656	0.021	-0.0039	No
62	Xpc	5840	0.011	-0.0185	No
63	Rfc5	5881	0.007	-0.0215	No
64	Dut	5888	0.007	-0.0218	No
65	Pold1	5914	0.005	-0.0236	No
66	Ercc5	6183	-0.005	-0.0453	No
67	Pola2	6295	-0.012	-0.0539	No
68	Ddb2	6603	-0.031	-0.0779	No
69	Rbx1	6796	-0.044	-0.0922	No
70	Polr2f	6908	-0.051	-0.0996	No
71	Rad52	6977	-0.055	-0.1035	No
72	Ddb1	6992	-0.056	-0.1029	No
73	Nudt21	7019	-0.057	-0.1033	No
74	Arl6ip1	7085	-0.062	-0.1067	No
75	Polr2g	7087	-0.062	-0.1049	No
76	Fen1	7234	-0.070	-0.1146	No
77	Polr2k	7255	-0.072	-0.1140	No
78	Dad1	7267	-0.072	-0.1127	No
79	Gsdme	7365	-0.078	-0.1182	No
80	Cetn2	7447	-0.083	-0.1222	No
81	Upf3b	7450	-0.083	-0.1198	No
82	Bcap31	7555	-0.090	-0.1255	No
83	Polb	7674	-0.098	-0.1321	No
84	Ada	7734	-0.103	-0.1338	No
85	Ercc3	7739	-0.103	-0.1309	No
86	Smad5	7758	-0.105	-0.1292	No
87	Pold4	7807	-0.108	-0.1297	No
88	Pola1	8049	-0.124	-0.1455	No
89	Surf1	8392	-0.147	-0.1688	No
90	Polr1d	8526	-0.156	-0.1748	No
91	Pcna	8573	-0.161	-0.1736	No
92	Lig1	8581	-0.161	-0.1693	No
93	Sdcbp	8585	-0.161	-0.1645	No
94	Rad51	8594	-0.162	-0.1602	No
95	Guk1	8611	-0.164	-0.1565	No
96	Ncbp2	8622	-0.164	-0.1523	No
97	Taf1c	8723	-0.173	-0.1551	No
98	Ago4	8955	-0.189	-0.1681	No
99	Nme1	9122	-0.201	-0.1754	Yes
100	Ercc1	9158	-0.203	-0.1720	Yes
101	Zwint	9163	-0.203	-0.1661	Yes
102	Gtf2b	9171	-0.204	-0.1604	Yes
103	Rpa3	9191	-0.205	-0.1557	Yes
104	Adcy6	9337	-0.217	-0.1608	Yes
105	Polr2e	9341	-0.217	-0.1544	Yes
106	Sac3d1	9471	-0.226	-0.1579	Yes
107	Gpx4	9587	-0.233	-0.1601	Yes
108	Sec61a1	9588	-0.233	-0.1530	Yes
109	Rfc2	9644	-0.237	-0.1502	Yes
110	Nudt9	9855	-0.255	-0.1594	Yes
111	Pold3	9861	-0.255	-0.1520	Yes
112	Rala	9965	-0.264	-0.1523	Yes
113	Brf2	10083	-0.273	-0.1534	Yes
114	Stx3	10272	-0.291	-0.1598	Yes
115	Nelfe	10402	-0.300	-0.1610	Yes
116	Edf1	10484	-0.309	-0.1581	Yes
117	Tyms	10489	-0.310	-0.1490	Yes
118	Aaas	10503	-0.311	-0.1405	Yes
119	Eif1b	10517	-0.312	-0.1319	Yes
120	Impdh2	10554	-0.317	-0.1251	Yes
121	Taf13	10558	-0.317	-0.1156	Yes
122	Vps28	10561	-0.318	-0.1061	Yes
123	Tarbp2	10659	-0.330	-0.1038	Yes
124	Rnmt	10764	-0.341	-0.1018	Yes
125	Prim1	10914	-0.357	-0.1029	Yes
126	Rev3l	10955	-0.363	-0.0951	Yes
127	Nfx1	11021	-0.372	-0.0889	Yes
128	Gtf3c5	11022	-0.372	-0.0775	Yes
129	Tsg101	11314	-0.414	-0.0885	Yes
130	Ercc4	11411	-0.429	-0.0831	Yes
131	Snapc4	11466	-0.434	-0.0742	Yes
132	Polr3gl	11536	-0.448	-0.0660	Yes
133	Alyref	11568	-0.454	-0.0546	Yes
134	Supt4a	11667	-0.475	-0.0480	Yes
135	Polr1h	11682	-0.476	-0.0345	Yes
136	Ercc8	11783	-0.496	-0.0274	Yes
137	Polr2i	11907	-0.538	-0.0209	Yes
138	Itpa	11940	-0.546	-0.0068	Yes
139	Rfc3	12246	-0.694	-0.0103	Yes
140	Aprt	12361	-0.849	0.0065	Yes