Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group3_versus_Group4.Mast_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	0.23507524
Normalized Enrichment Score (NES)	1.087438
Nominal p-value	0.26422018
FDR q-value	0.63485277
FWER p-Value	0.997

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Pik3r5	49	0.918	0.0265	Yes
2	Cpq	73	0.863	0.0533	Yes
3	Gp1ba	149	0.759	0.0724	Yes
4	Fyn	297	0.653	0.0822	Yes
5	Rbsn	301	0.651	0.1036	Yes
6	Cd46	313	0.645	0.1241	Yes
7	Casp4	391	0.611	0.1382	Yes
8	Gngt2	491	0.573	0.1492	Yes
9	Lgals3	552	0.549	0.1625	Yes
10	Irf7	626	0.528	0.1742	Yes
11	Prkcd	906	0.467	0.1670	Yes
12	Gata3	993	0.452	0.1751	Yes
13	Dusp6	999	0.450	0.1896	Yes
14	Plek	1097	0.426	0.1959	Yes
15	Usp16	1143	0.420	0.2062	Yes
16	Grb2	1331	0.395	0.2041	Yes
17	Stx4a	1362	0.392	0.2147	Yes
18	Brpf3	1416	0.384	0.2232	Yes
19	Gpd2	1722	0.339	0.2097	Yes
20	Gca	1736	0.337	0.2198	Yes
21	C2	1815	0.325	0.2243	Yes
22	Plaur	1913	0.313	0.2269	Yes
23	Pim1	1940	0.311	0.2351	Yes
24	Irf1	2114	0.291	0.2307	No
25	Kcnip2	2374	0.267	0.2186	No
26	Timp2	2438	0.263	0.2222	No
27	Casp9	2553	0.251	0.2213	No
28	Atox1	2942	0.216	0.1970	No
29	Cblb	3167	0.202	0.1855	No
30	Mmp14	3171	0.202	0.1920	No
31	Usp14	3203	0.199	0.1961	No
32	Gnb2	3283	0.192	0.1960	No
33	Ctsd	3319	0.189	0.1995	No
34	Zeb1	3320	0.189	0.2057	No
35	Gmfb	3358	0.186	0.2089	No
36	Msrb1	3611	0.164	0.1939	No
37	Gnai2	3675	0.159	0.1941	No
38	Jak2	3691	0.158	0.1981	No
39	Itgam	4040	0.130	0.1742	No
40	S100a13	4076	0.128	0.1756	No
41	Casp3	4122	0.125	0.1761	No
42	Rabif	4686	0.084	0.1332	No
43	Usp8	4819	0.076	0.1250	No
44	Casp1	4910	0.069	0.1200	No
45	Plscr1	4987	0.065	0.1160	No
46	Lipa	5009	0.063	0.1164	No
47	Kcnip3	5054	0.060	0.1148	No
48	Spock2	5169	0.052	0.1073	No
49	Pdp1	5366	0.039	0.0927	No
50	Csrp1	5489	0.033	0.0839	No
51	Car2	5520	0.030	0.0824	No
52	Gnb4	5526	0.030	0.0830	No
53	Akap10	5564	0.027	0.0809	No
54	Anxa5	5845	0.011	0.0585	No
55	Ppp2cb	5872	0.008	0.0567	No
56	Rhog	5891	0.006	0.0554	No
57	Ppp4c	5938	0.004	0.0518	No
58	Rce1	5943	0.004	0.0517	No
59	Ctso	6002	0.000	0.0470	No
60	S100a9	6037	0.000	0.0442	No
61	Dusp5	6086	-0.001	0.0403	No
62	Fcer1g	6352	-0.017	0.0194	No
63	Ctsc	6584	-0.030	0.0016	No
64	Psen1	6623	-0.033	-0.0004	No
65	Usp15	6624	-0.033	0.0007	No
66	Ehd1	6626	-0.033	0.0018	No
67	Dock9	7010	-0.057	-0.0274	No
68	Dpp4	7175	-0.067	-0.0385	No
69	Dock10	7571	-0.091	-0.0675	No
70	Ctsb	7654	-0.097	-0.0710	No
71	Pfn1	7720	-0.102	-0.0729	No
72	Prdm4	7723	-0.102	-0.0696	No
73	Kif2a	7850	-0.112	-0.0761	No
74	Lcp2	7955	-0.118	-0.0807	No
75	Prep	8119	-0.129	-0.0896	No
76	Lamp2	8273	-0.139	-0.0974	No
77	Serpinc1	8277	-0.139	-0.0930	No
78	Src	8355	-0.145	-0.0945	No
79	Gng2	8432	-0.149	-0.0957	No
80	Xpnpep1	8452	-0.150	-0.0922	No
81	Rasgrp1	8558	-0.159	-0.0955	No
82	Pik3cg	8947	-0.188	-0.1207	No
83	Prcp	9295	-0.214	-0.1417	No
84	Lyn	9408	-0.222	-0.1434	No
85	Adam9	9451	-0.225	-0.1394	No
86	Cdk5r1	9487	-0.226	-0.1347	No
87	Rnf4	9594	-0.233	-0.1355	No
88	Cr2	9618	-0.235	-0.1296	No
89	Pik3ca	9744	-0.245	-0.1316	No
90	Irf2	9771	-0.247	-0.1255	No
91	Casp7	9810	-0.251	-0.1202	No
92	Vcpip1	9891	-0.258	-0.1182	No
93	Ctsl	9932	-0.261	-0.1127	No
94	Dyrk2	10198	-0.283	-0.1249	No
95	Lap3	10253	-0.288	-0.1197	No
96	Sh2b3	10255	-0.288	-0.1102	No
97	Cdh13	10381	-0.298	-0.1104	No
98	Tnfaip3	10492	-0.310	-0.1090	No
99	Gzmb	10496	-0.311	-0.0990	No
100	Was	10506	-0.311	-0.0894	No
101	Hspa5	10524	-0.313	-0.0803	No
102	Phex	10639	-0.328	-0.0787	No
103	Psmb9	10642	-0.328	-0.0680	No
104	Dgkg	10727	-0.337	-0.0636	No
105	F8	10736	-0.337	-0.0530	No
106	Raf1	11001	-0.369	-0.0622	No
107	C3	11007	-0.369	-0.0503	No
108	Il6	11166	-0.392	-0.0501	No
109	Calm3	11203	-0.396	-0.0399	No
110	Calm1	11345	-0.421	-0.0374	No
111	Gnai3	11728	-0.485	-0.0522	No
112	Lta4h	11864	-0.518	-0.0460	No
113	Pla2g4a	12006	-0.567	-0.0386	No
114	Dock4	12097	-0.612	-0.0256	No
115	Sirt6	12293	-0.737	-0.0169	No
116	Fdx1	12373	-0.868	0.0055	No