DatasetMast.Mast_Pheno.cls
#Group3_versus_Group4.Mast_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_CHOLESTEROL_HOMEOSTASIS
Enrichment Score (ES)0.353908
Normalized Enrichment Score (NES)1.3391608
Nominal p-value0.11992263
FDR q-value0.7312976
FWER p-Value0.721
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_CHOLESTEROL_HOMEOSTASIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gusb720.8630.0599Yes
2Lss3530.6230.0847Yes
3Lgals35520.5490.1105Yes
4Pdk35820.5430.1495Yes
5Stx5a6540.5180.1832Yes
6Pcyt28090.4830.2075Yes
7Ethe18230.4800.2430Yes
8Atf58360.4780.2784Yes
9Pnrc111770.4160.2826Yes
10Tm7sf212980.4000.3034Yes
11Hmgcr13840.3870.3260Yes
12Trp53inp116890.3430.3276Yes
13Plaur19130.3130.3335Yes
14Dhcr719520.3090.3539Yes
15Fasn27930.2280.3035No
16Idi130940.2080.2951No
17Ech135290.1700.2730No
18Mvk37780.1510.2645No
19S100a1137880.1500.2752No
20Niban144060.1050.2335No
21Sc5d44510.1020.2377No
22Chka47240.0820.2219No
23Acss248140.0760.2205No
24Nsdhl49630.0660.2137No
25Plscr149870.0650.2167No
26Alcam50050.0630.2201No
27Fads254780.0330.1846No
28Stard456740.0200.1704No
29Antxr257350.0170.1669No
30Anxa558450.0110.1589No
31Hmgcs16278-0.0110.1248No
32Abca26904-0.0510.0782No
33Ctnnb17456-0.0830.0401No
34Atxn27681-0.0990.0296No
35Fbxo67838-0.1110.0254No
36Srebf27884-0.1140.0305No
37Fdft18336-0.1440.0050No
38Fabp58814-0.178-0.0200No
39Tmem978896-0.184-0.0125No
40Actg19316-0.216-0.0298No
41Ldlr9647-0.237-0.0384No
42Ebp9815-0.251-0.0328No
43Cyp519928-0.261-0.0219No
44Pmvk10546-0.316-0.0477No
45Fdps10613-0.324-0.0284No
46Cpeb210704-0.334-0.0102No
47Acat210754-0.3410.0118No
48Sqle11324-0.416-0.0025No
49Cd911780-0.495-0.0015No
50Hsd17b712274-0.7190.0135No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_CHOLESTEROL_HOMEOSTASIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_CHOLESTEROL_HOMEOSTASIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_CHOLESTEROL_HOMEOSTASIS