Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group3_versus_Group4.Mast_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	2
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.2945398
Normalized Enrichment Score (NES)	1.2083473
Nominal p-value	0.17680608
FDR q-value	0.66431653
FWER p-Value	0.924

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tsc1	37	0.947	0.0294	Yes
2	Mmp2	177	0.734	0.0432	Yes
3	Nectin2	209	0.709	0.0649	Yes
4	Pten	294	0.656	0.0806	Yes
5	Lamb3	368	0.619	0.0958	Yes
6	Insig1	482	0.577	0.1064	Yes
7	B4galt1	502	0.567	0.1242	Yes
8	Gtf2f1	676	0.512	0.1277	Yes
9	Vcl	690	0.509	0.1441	Yes
10	Evl	724	0.501	0.1585	Yes
11	Mapk14	772	0.491	0.1715	Yes
12	Pals1	875	0.470	0.1793	Yes
13	Icam2	954	0.459	0.1887	Yes
14	Msn	959	0.458	0.2040	Yes
15	Ptk2	1092	0.427	0.2079	Yes
16	Layn	1158	0.418	0.2170	Yes
17	Exoc4	1282	0.404	0.2208	Yes
18	Taok2	1307	0.399	0.2325	Yes
19	Map3k20	1341	0.394	0.2433	Yes
20	Stx4a	1362	0.392	0.2551	Yes
21	Cercam	1497	0.369	0.2569	Yes
22	Itga9	1549	0.361	0.2651	Yes
23	Pik3cb	1553	0.360	0.2771	Yes
24	Pard6g	1569	0.358	0.2881	Yes
25	Actn1	1638	0.348	0.2945	Yes
26	Hras	2056	0.297	0.2709	No
27	Sgce	2141	0.287	0.2739	No
28	Pbx2	2267	0.275	0.2731	No
29	Arpc2	2413	0.265	0.2704	No
30	Itga2	2433	0.263	0.2779	No
31	Cadm2	2513	0.256	0.2802	No
32	Amigo1	2720	0.234	0.2715	No
33	Ptprc	2741	0.233	0.2779	No
34	Fbn1	2806	0.227	0.2805	No
35	Inppl1	2808	0.227	0.2882	No
36	Crat	2949	0.216	0.2842	No
37	Nlgn3	3075	0.210	0.2812	No
38	Icam4	3165	0.202	0.2809	No
39	Sorbs3	3322	0.189	0.2747	No
40	Arhgef6	3440	0.178	0.2713	No
41	Nlgn2	3450	0.177	0.2766	No
42	Akt2	3473	0.175	0.2808	No
43	Gnai2	3675	0.159	0.2700	No
44	Itgb1	3793	0.150	0.2656	No
45	Wasl	3834	0.147	0.2674	No
46	Nectin1	3995	0.134	0.2590	No
47	Cdk8	4105	0.126	0.2545	No
48	Vwf	4426	0.104	0.2321	No
49	Vav2	4473	0.100	0.2318	No
50	Rhof	4761	0.080	0.2112	No
51	Rasa1	4786	0.078	0.2119	No
52	Pkd1	4815	0.076	0.2123	No
53	Nrap	4980	0.065	0.2012	No
54	Ctnnd1	5040	0.061	0.1985	No
55	Bmp1	5115	0.056	0.1944	No
56	Cdh1	5199	0.049	0.1894	No
57	Cd274	5277	0.045	0.1847	No
58	Lima1	5879	0.007	0.1362	No
59	Vcan	6010	0.000	0.1256	No
60	Nectin4	6090	-0.001	0.1192	No
61	Shc1	6141	-0.003	0.1153	No
62	Cap1	6266	-0.010	0.1056	No
63	Syk	6276	-0.011	0.1052	No
64	Dhx16	6405	-0.020	0.0955	No
65	Myh9	6443	-0.023	0.0933	No
66	Icam5	6476	-0.025	0.0916	No
67	Ikbkg	6592	-0.030	0.0833	No
68	Dlg1	7188	-0.067	0.0373	No
69	Sympk	7330	-0.076	0.0285	No
70	Rac2	7355	-0.077	0.0292	No
71	Amigo2	7473	-0.084	0.0226	No
72	Epb41l2	7701	-0.100	0.0076	No
73	Pik3r3	7702	-0.100	0.0110	No
74	Pfn1	7720	-0.102	0.0131	No
75	Mpzl1	7819	-0.110	0.0089	No
76	Cnn2	7933	-0.117	0.0037	No
77	Tmem8b	8208	-0.135	-0.0139	No
78	Skap2	8246	-0.137	-0.0122	No
79	Itgb4	8298	-0.141	-0.0115	No
80	Akt3	8328	-0.143	-0.0090	No
81	Src	8355	-0.145	-0.0061	No
82	Zyx	8357	-0.145	-0.0013	No
83	Map4k2	8524	-0.156	-0.0094	No
84	Ldlrap1	8670	-0.169	-0.0154	No
85	Tial1	8836	-0.180	-0.0226	No
86	Nf1	8973	-0.190	-0.0272	No
87	Vasp	9001	-0.192	-0.0228	No
88	Cd34	9131	-0.201	-0.0264	No
89	Actg1	9316	-0.216	-0.0339	No
90	Tubg1	9360	-0.218	-0.0299	No
91	Tjp1	9383	-0.220	-0.0242	No
92	Cd86	9394	-0.221	-0.0175	No
93	Sirpa	9415	-0.222	-0.0115	No
94	Adam9	9451	-0.225	-0.0066	No
95	Rsu1	9528	-0.227	-0.0050	No
96	Itga10	9710	-0.242	-0.0114	No
97	Ctnna1	10157	-0.279	-0.0381	No
98	Atp1a3	10235	-0.286	-0.0345	No
99	Adam15	10236	-0.286	-0.0247	No
100	Myl12b	10475	-0.308	-0.0335	No
101	Actb	10478	-0.308	-0.0231	No
102	Plcg1	10811	-0.347	-0.0382	No
103	Tspan4	10861	-0.352	-0.0301	No
104	Actn4	10971	-0.365	-0.0265	No
105	Baiap2	11244	-0.403	-0.0348	No
106	Nf2	11273	-0.407	-0.0231	No
107	Jup	11482	-0.437	-0.0250	No
108	Hadh	11576	-0.456	-0.0170	No
109	Pecam1	11744	-0.489	-0.0138	No
110	Ywhah	11925	-0.543	-0.0099	No
111	Myh10	12262	-0.704	-0.0130	No
112	Icam1	12340	-0.803	0.0082	No