Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group2_versus_Group4.Mast_Pheno.cls #Group2_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_PEROXISOME
Enrichment Score (ES)	-0.3269888
Normalized Enrichment Score (NES)	-1.3361032
Nominal p-value	0.0662768
FDR q-value	0.54711103
FWER p-Value	0.699

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Pex5	47	0.919	0.0345	No
2	Gnpat	103	0.807	0.0637	No
3	Lonp2	211	0.706	0.0844	No
4	Mlycd	226	0.690	0.1120	No
5	Sema3c	524	0.564	0.1115	No
6	Idh2	1201	0.420	0.0743	No
7	Abcc5	1557	0.365	0.0608	No
8	Smarcc1	1716	0.343	0.0623	No
9	Ercc1	1968	0.310	0.0549	No
10	Dhrs3	2059	0.300	0.0601	No
11	Atxn1	2462	0.256	0.0383	No
12	Hmgcl	2480	0.255	0.0475	No
13	Pex14	2838	0.223	0.0279	No
14	Acox1	3065	0.199	0.0179	No
15	Cln6	3179	0.189	0.0167	No
16	Cnbp	3247	0.183	0.0189	No
17	Mvp	3340	0.175	0.0188	No
18	Msh2	3344	0.175	0.0258	No
19	Pex11b	3559	0.158	0.0151	No
20	Acsl4	3732	0.140	0.0070	No
21	Ywhah	4222	0.105	-0.0282	No
22	Elovl5	4562	0.078	-0.0524	No
23	Dhcr24	4662	0.070	-0.0575	No
24	Fdps	4989	0.050	-0.0818	No
25	Nudt19	5159	0.039	-0.0938	No
26	Cln8	5480	0.018	-0.1190	No
27	Ctbp1	5974	-0.016	-0.1582	No
28	Acot8	6082	-0.025	-0.1658	No
29	Pex6	6451	-0.050	-0.1935	No
30	Aldh1a1	6578	-0.058	-0.2012	No
31	Siah1a	6588	-0.059	-0.1995	No
32	Abcb4	6604	-0.060	-0.1982	No
33	Hsd17b4	6606	-0.060	-0.1958	No
34	Abcd2	6646	-0.063	-0.1963	No
35	Acsl5	6846	-0.077	-0.2092	No
36	Acaa1a	6859	-0.078	-0.2069	No
37	Pex13	6865	-0.078	-0.2041	No
38	Retsat	7227	-0.103	-0.2290	No
39	Abcd3	7485	-0.118	-0.2449	No
40	Sod1	7557	-0.122	-0.2455	No
41	Scp2	7583	-0.125	-0.2423	No
42	Ercc3	7752	-0.135	-0.2503	No
43	Slc35b2	7952	-0.148	-0.2602	No
44	Pex11a	8058	-0.157	-0.2622	No
45	Abcd1	8159	-0.164	-0.2634	No
46	Hras	8321	-0.177	-0.2691	No
47	Idi1	8335	-0.178	-0.2627	No
48	Cat	8560	-0.192	-0.2728	No
49	Ech1	8671	-0.202	-0.2733	No
50	Slc23a2	9025	-0.229	-0.2924	No
51	Fis1	9027	-0.229	-0.2829	No
52	Fads1	9109	-0.236	-0.2796	No
53	Isoc1	9116	-0.237	-0.2703	No
54	Slc25a17	9684	-0.279	-0.3045	No
55	Slc25a4	9963	-0.303	-0.3144	Yes
56	Abcb1a	10016	-0.307	-0.3058	Yes
57	Tspo	10063	-0.312	-0.2965	Yes
58	Rdh11	10089	-0.314	-0.2854	Yes
59	Hsd3b7	10222	-0.328	-0.2824	Yes
60	Slc25a19	10228	-0.328	-0.2692	Yes
61	Pabpc1	10301	-0.336	-0.2610	Yes
62	Crat	10479	-0.354	-0.2605	Yes
63	Prdx5	10519	-0.360	-0.2487	Yes
64	Gstk1	10607	-0.369	-0.2404	Yes
65	Top2a	11022	-0.421	-0.2563	Yes
66	Dlg4	11097	-0.431	-0.2443	Yes
67	Prdx1	11166	-0.440	-0.2315	Yes
68	Acsl1	11284	-0.457	-0.2220	Yes
69	Sod2	11375	-0.471	-0.2096	Yes
70	Ehhadh	11391	-0.474	-0.1911	Yes
71	Ide	11411	-0.477	-0.1728	Yes
72	Pex2	11421	-0.479	-0.1536	Yes
73	Vps4b	11570	-0.505	-0.1445	Yes
74	Abcb9	11581	-0.506	-0.1243	Yes
75	Itgb1bp1	11790	-0.556	-0.1179	Yes
76	Idh1	11793	-0.557	-0.0949	Yes
77	Bcl10	12067	-0.641	-0.0903	Yes
78	Hsd17b11	12083	-0.647	-0.0645	Yes
79	Eci2	12176	-0.696	-0.0430	Yes
80	Aldh9a1	12274	-0.767	-0.0189	Yes
81	Cdk7	12286	-0.776	0.0125	Yes