DatasetMast.Mast_Pheno.cls
#Group2_versus_Group4.Mast_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMast_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.34680948
Normalized Enrichment Score (NES)-1.4549769
Nominal p-value0.026415095
FDR q-value0.6717865
FWER p-Value0.443
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Dlst720.8570.0094No
2Ndufb6750.8520.0244No
3Tcirg1830.8390.0387No
4Lrpprc2170.6980.0403No
5Atp1b12730.6600.0476No
6Iscu3510.6270.0524No
7Idh3a4540.5860.0545No
8Tomm70a4700.5810.0636No
9Pdp17380.5010.0508No
10Etfa7980.4870.0546No
11Uqcr108220.4810.0613No
12Opa18270.4800.0695No
13Pmpca9750.4510.0656No
14Cox1110300.4430.0690No
15Vdac210540.4380.0749No
16Gpx410980.4340.0792No
17Ndufa111100.4320.0859No
18Ndufb811930.4220.0868No
19Idh212010.4200.0937No
20Acadm12110.4190.1004No
21Atp6v1c114910.3750.0843No
22Ndufab116350.3530.0789No
23Mrpl1117620.3350.0746No
24Glud119440.3130.0654No
25Uqcrh21280.2900.0557No
26Vdac123460.2680.0427No
27Fh125120.2500.0337No
28Phyh25230.2500.0374No
29Ndufv126340.2400.0327No
30Decr127100.2330.0307No
31Oat27190.2320.0342No
32Got227340.2310.0371No
33Ndufb228200.2240.0342No
34Aldh6a130510.2010.0190No
35Ndufb532730.1810.0042No
36Mrps2233740.173-0.0009No
37Dld34790.164-0.0064No
38Slc25a1136030.153-0.0137No
39Fdx137150.142-0.0203No
40Acadsb38220.134-0.0265No
41Afg3l239480.127-0.0344No
42Hspa939560.126-0.0328No
43Mtrf140780.117-0.0405No
44Ndufs243400.094-0.0601No
45Mrps1144560.085-0.0680No
46Hadha45920.076-0.0777No
47Nqo246120.073-0.0779No
48Ndufs146490.071-0.0796No
49Timm17a46610.070-0.0792No
50Acat146690.069-0.0786No
51Vdac346710.069-0.0774No
52Immt46780.069-0.0767No
53Atp6v0c47650.064-0.0826No
54Hadhb49100.054-0.0933No
55Mtrr49110.054-0.0924No
56Atp6v0b53070.030-0.1241No
57Slc25a2053190.029-0.1244No
58Cpt1a54840.018-0.1375No
59Surf155190.015-0.1400No
60Slc25a1256340.007-0.1492No
61Pdhb5749-0.001-0.1584No
62Dlat5801-0.004-0.1625No
63Ndufa66079-0.025-0.1847No
64Atp6v1f6125-0.028-0.1878No
65Pdha16274-0.038-0.1992No
66Timm136415-0.048-0.2098No
67Mgst36433-0.049-0.2103No
68Cs6488-0.052-0.2138No
69Mfn26630-0.062-0.2242No
70Ndufa46657-0.064-0.2251No
71Acadvl6800-0.074-0.2354No
72Acaa1a6859-0.078-0.2387No
73Htra26885-0.079-0.2394No
74Cox156892-0.080-0.2385No
75Gpi16910-0.081-0.2384No
76Cox106997-0.086-0.2439No
77Pdhx7110-0.095-0.2513No
78Mpc17125-0.096-0.2507No
79Mrpl357133-0.097-0.2496No
80Alas17185-0.100-0.2520No
81Retsat7227-0.103-0.2535No
82Fxn7355-0.111-0.2619No
83Oxa1l7372-0.111-0.2612No
84Idh3g7408-0.114-0.2620No
85Sdha7411-0.114-0.2602No
86Atp6v1g17484-0.118-0.2639No
87Ndufa87587-0.125-0.2700No
88Idh3b7670-0.131-0.2744No
89Ogdh7825-0.140-0.2844No
90Mdh17852-0.142-0.2840No
91Cyb5a7870-0.144-0.2828No
92Cox8a8023-0.154-0.2925No
93Timm98078-0.159-0.2941No
94Bckdha8140-0.163-0.2961No
95Nnt8157-0.164-0.2945No
96Mtx28239-0.170-0.2981No
97Suclg18348-0.179-0.3037No
98Eci18391-0.182-0.3039No
99Mrpl158422-0.184-0.3031No
100Ndufs78463-0.186-0.3030No
101Atp6v1d8523-0.190-0.3045No
102Cox7b8613-0.197-0.3082No
103Ech18671-0.202-0.3093No
104Atp6v1h8724-0.206-0.3099No
105Ndufs38747-0.207-0.3080No
106Grpel18788-0.210-0.3075No
107Atp6v0e8838-0.214-0.3077No
108Mrps308851-0.215-0.3049No
109Uqcrq8861-0.216-0.3017No
110Aco29206-0.244-0.3254No
111Sucla29263-0.249-0.3256No
112Sdhc9354-0.255-0.3284No
113Rhot29388-0.257-0.3265No
114Casp79414-0.259-0.3239No
115Timm109423-0.259-0.3200No
116Slc25a39446-0.261-0.3171No
117Cox179546-0.269-0.3204No
118Etfdh9831-0.291-0.3384No
119Phb29935-0.301-0.3414Yes
120Slc25a49963-0.303-0.3382Yes
121Uqcrc110004-0.306-0.3361Yes
122Ndufb710131-0.318-0.3407Yes
123Ndufa910145-0.320-0.3360Yes
124Echs110171-0.322-0.3323Yes
125Atp6v1e110215-0.327-0.3300Yes
126Hccs10422-0.349-0.3406Yes
127Timm8b10441-0.351-0.3358Yes
128Uqcrb10450-0.352-0.3302Yes
129Cox5a10547-0.363-0.3316Yes
130Abcb710565-0.365-0.3265Yes
131Ndufc110577-0.366-0.3208Yes
132Cyb5r310592-0.368-0.3154Yes
133Slc25a510602-0.369-0.3096Yes
134Por10717-0.383-0.3121Yes
135Cyc110776-0.390-0.3099Yes
136Sdhb10829-0.395-0.3071Yes
137Cox7c10943-0.410-0.3090Yes
138Cox6b110960-0.413-0.3030Yes
139Uqcr1110992-0.416-0.2981Yes
140Ndufs811021-0.421-0.2929Yes
141Sdhd11104-0.432-0.2919Yes
142Rhot111111-0.433-0.2847Yes
143Tomm2211177-0.441-0.2821Yes
144Uqcrc211315-0.461-0.2851Yes
145Cox6a111319-0.462-0.2771Yes
146Polr2f11329-0.464-0.2696Yes
147Prdx311350-0.467-0.2629Yes
148Mrpl3411390-0.474-0.2577Yes
149Bax11415-0.477-0.2512Yes
150Ndufb311447-0.483-0.2451Yes
151Ndufa311543-0.499-0.2440Yes
152Mrps1211545-0.499-0.2352Yes
153Uqcrfs111584-0.508-0.2292Yes
154Aifm111709-0.531-0.2299Yes
155Ndufa511716-0.533-0.2209Yes
156Ndufa711735-0.539-0.2128Yes
157Idh111793-0.557-0.2075Yes
158Timm5011852-0.575-0.2020Yes
159Cox7a211892-0.585-0.1948Yes
160Ndufa211938-0.602-0.1878Yes
161Atp6ap111956-0.606-0.1784Yes
162Ndufs611980-0.613-0.1693Yes
163Supv3l112033-0.629-0.1624Yes
164Mdh212043-0.633-0.1519Yes
165Etfb12086-0.647-0.1438Yes
166Mrps1512117-0.666-0.1344Yes
167Hsd17b1012150-0.679-0.1249Yes
168Atp5pb12154-0.680-0.1130Yes
169Ndufv212205-0.712-0.1044Yes
170Cox7a2l12230-0.722-0.0936Yes
171Ldha12252-0.745-0.0820Yes
172Cox5b12262-0.755-0.0693Yes
173Ndufs412281-0.772-0.0570Yes
174Cox4i112315-0.816-0.0452Yes
175Acaa212402-0.982-0.0348Yes
176Ndufc212409-1.028-0.0170Yes
177Cox6c12418-1.0950.0019Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION