DatasetMast.Mast_Pheno.cls
#Group2_versus_Group4.Mast_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMast_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_MYC_TARGETS_V1
Enrichment Score (ES)-0.30740282
Normalized Enrichment Score (NES)-1.2380518
Nominal p-value0.19880715
FDR q-value0.7656127
FWER p-Value0.857
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_MYC_TARGETS_V1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hspd171.2540.0218No
2Xpo1151.1080.0411No
3Hnrnpa3390.9480.0562No
4Aimp21780.7300.0580No
5Psmc42250.6920.0666No
6Hnrnpa12280.6880.0787No
7Srsf12400.6810.0900No
8Cul13600.6230.0914No
9Hnrnpu4100.6040.0982No
10Kpnb14430.5880.1061No
11Tomm70a4700.5810.1144No
12Eif4g24990.5730.1224No
13Hnrnpa2b17300.5050.1126No
14Srpk110040.4470.0983No
15Rfc410910.4350.0991No
16Hspe110920.4340.1069No
17H2az114390.3810.0855No
18Fam120a14770.3780.0892No
19Pole315610.3640.0889No
20Ndufab116350.3530.0893No
21Smarcc117160.3430.0889No
22Rrp918780.3190.0815No
23Ppia19330.3140.0827No
24Cbx323140.2700.0565No
25Vdac123460.2680.0588No
26Ruvbl225960.2440.0428No
27Fbl26620.2380.0418No
28Txnl4a27050.2340.0425No
29Got227340.2310.0444No
30Eif4e27940.2260.0436No
31Syncrip28330.2230.0445No
32Snrpa128610.2210.0462No
33Mrpl2329910.2080.0394No
34Hnrnpr30420.2020.0390No
35Psma631440.1930.0342No
36Mcm531970.1870.0333No
37Cnbp32470.1830.0325No
38Nop1635200.1600.0132No
39Vbp136390.1500.0063No
40G3bp137050.1430.0035No
41Bub337960.136-0.0014No
42Srsf738050.1360.0004No
43Pa2g438490.133-0.0008No
44Hdac238810.130-0.0010No
45Ncbp139330.128-0.0028No
46Rps639790.125-0.0043No
47Psmd842940.098-0.0281No
48Etf143840.091-0.0338No
49Nop5644270.089-0.0356No
50Srsf344950.083-0.0396No
51Ifrd145380.080-0.0416No
52Vdac346710.069-0.0511No
53Srsf246860.068-0.0511No
54Psmd147010.068-0.0510No
55Rsl1d147100.067-0.0504No
56C1qbp47570.064-0.0530No
57Cstf247740.063-0.0532No
58Canx49190.054-0.0640No
59Psmd350720.044-0.0756No
60Erh51620.039-0.0822No
61Cct251730.038-0.0823No
62Mrps18b52340.034-0.0866No
63Snrpd252700.032-0.0889No
64Mrpl953240.029-0.0927No
65Eif4a153710.026-0.0960No
66Prpf3154080.024-0.0985No
67Cdc4554440.021-0.1010No
68Mcm654510.020-0.1011No
69Rnps154580.020-0.1012No
70Xrcc654760.018-0.1023No
71Snrpd356110.009-0.1130No
72Prps256300.008-0.1144No
73Tra2b5793-0.003-0.1275No
74Eif3j15808-0.004-0.1286No
75Psmd75820-0.006-0.1294No
76Ap3s16037-0.021-0.1466No
77Hddc26071-0.024-0.1489No
78Odc16178-0.031-0.1570No
79Dhx156346-0.044-0.1698No
80Tfdp16434-0.049-0.1761No
81Rrm16456-0.050-0.1769No
82Ywhae6491-0.053-0.1787No
83Ilf26879-0.079-0.2089No
84Psmb26907-0.081-0.2096No
85Ywhaq6965-0.084-0.2128No
86Hnrnpd7014-0.088-0.2151No
87Ube2e17038-0.090-0.2154No
88Ran7070-0.092-0.2163No
89Nap1l17095-0.094-0.2166No
90Ddx217153-0.098-0.2195No
91Serbp17166-0.099-0.2187No
92Ncbp27203-0.101-0.2198No
93Pgk17214-0.102-0.2188No
94Gnl37224-0.103-0.2177No
95Ssbp17241-0.104-0.2172No
96Snrpd17356-0.111-0.2245No
97Mcm47443-0.116-0.2294No
98Eif2s17562-0.123-0.2369No
99Usp17625-0.128-0.2396No
100Sf3b37768-0.137-0.2488No
101Pcna7850-0.142-0.2528No
102Pabpc47881-0.145-0.2527No
103Ddx188068-0.158-0.2650No
104Npm18081-0.159-0.2632No
105Dut8098-0.160-0.2616No
106Cad8131-0.162-0.2614No
107Prdx48174-0.165-0.2618No
108Cdk48296-0.174-0.2686No
109Cct48340-0.178-0.2689No
110Cdk28491-0.188-0.2778No
111Rpl228507-0.189-0.2756No
112Tardbp8579-0.194-0.2780No
113Psma78646-0.199-0.2798No
114Tufm8706-0.204-0.2809No
115Glo18719-0.205-0.2782No
116Nhp28845-0.214-0.2846No
117Apex18915-0.221-0.2863No
118Mcm79016-0.228-0.2904No
119Ppm1g9136-0.239-0.2958No
120Psma49274-0.250-0.3025No
121Srm9331-0.253-0.3026Yes
122Gspt19366-0.256-0.3008Yes
123Hnrnpc9387-0.257-0.2978Yes
124Eif2s29404-0.258-0.2945Yes
125Slc25a39446-0.261-0.2932Yes
126Eif3b9619-0.274-0.3023Yes
127Cdc209646-0.276-0.2995Yes
128Abce19744-0.284-0.3023Yes
129Tcp19783-0.287-0.3003Yes
130Rpl189865-0.294-0.3016Yes
131Uba29866-0.294-0.2964Yes
132Phb29935-0.301-0.2966Yes
133Lsm29953-0.302-0.2925Yes
134Pold29977-0.304-0.2890Yes
135Xpot10061-0.312-0.2902Yes
136Cct710126-0.318-0.2897Yes
137Psmc610203-0.326-0.2901Yes
138Pwp110299-0.336-0.2918Yes
139Pabpc110301-0.336-0.2859Yes
140Ssb10350-0.342-0.2837Yes
141Acp110389-0.347-0.2806Yes
142Cct310504-0.358-0.2835Yes
143Rps1010518-0.360-0.2781Yes
144Cox5a10547-0.363-0.2739Yes
145Snrpg10618-0.371-0.2730Yes
146Stard710636-0.373-0.2677Yes
147Orc210684-0.379-0.2648Yes
148Rpl1410722-0.384-0.2609Yes
149Mad2l110752-0.387-0.2564Yes
150Cyc110776-0.390-0.2513Yes
151Nme110823-0.394-0.2480Yes
152Cops510862-0.399-0.2440Yes
153Psmd1410889-0.402-0.2389Yes
154Eef1b211004-0.417-0.2407Yes
155Snrpa11259-0.452-0.2534Yes
156Rps511260-0.452-0.2453Yes
157Nolc111316-0.462-0.2415Yes
158Eif4h11317-0.462-0.2333Yes
159Prdx311350-0.467-0.2275Yes
160Rad23b11388-0.473-0.2221Yes
161Pcbp111423-0.479-0.2163Yes
162Myc11429-0.480-0.2081Yes
163Rpl611431-0.480-0.1996Yes
164Psma211480-0.488-0.1948Yes
165Tyms11544-0.499-0.1910Yes
166Rplp011649-0.520-0.1902Yes
167Mcm211703-0.530-0.1851Yes
168Ranbp111713-0.532-0.1763Yes
169Exosc711739-0.540-0.1687Yes
170Trim2811754-0.545-0.1601Yes
171Psmb311797-0.558-0.1535Yes
172Hsp90ab111819-0.564-0.1451Yes
173Impdh211824-0.566-0.1354Yes
174Cct511908-0.592-0.1315Yes
175Ccna211971-0.610-0.1257Yes
176Hdgf11973-0.611-0.1148Yes
177Rps212009-0.623-0.1066Yes
178Clns1a12075-0.643-0.1004Yes
179Dek12231-0.724-0.1001Yes
180Rack112234-0.727-0.0872Yes
181Snrpb212235-0.727-0.0742Yes
182Ldha12252-0.745-0.0622Yes
183Psma112343-0.859-0.0542Yes
184Rps312406-0.991-0.0415Yes
185Sf3a112419-1.098-0.0229Yes
186Eif3d12436-1.3750.0004Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_MYC_TARGETS_V1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_MYC_TARGETS_V1: Random ES distribution   
Gene set null distribution of ES for HALLMARK_MYC_TARGETS_V1