Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group2_versus_Group4.Mast_Pheno.cls #Group2_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_GLYCOLYSIS
Enrichment Score (ES)	-0.22747336
Normalized Enrichment Score (NES)	-1.0529096
Nominal p-value	0.3576779
FDR q-value	0.71697617
FWER p-Value	0.986

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ankzf1	24	1.021	0.0257	No
2	Pam	183	0.727	0.0325	No
3	Psmc4	225	0.692	0.0479	No
4	Gusb	605	0.540	0.0316	No
5	Angptl4	715	0.509	0.0366	No
6	Pgm2	731	0.505	0.0490	No
7	Cdk1	794	0.488	0.0572	No
8	Slc25a13	971	0.451	0.0551	No
9	B4galt7	1147	0.427	0.0524	No
10	Spag4	1249	0.410	0.0553	No
11	Met	1281	0.405	0.0637	No
12	Capn5	1384	0.390	0.0660	No
13	Cd44	1522	0.371	0.0649	No
14	Gys1	1750	0.337	0.0555	No
15	Srd5a3	1790	0.332	0.0613	No
16	Pcx	1794	0.331	0.0700	No
17	Vcan	1832	0.325	0.0758	No
18	Tgfa	1853	0.323	0.0830	No
19	Ero1a	1881	0.319	0.0894	No
20	Ppia	1933	0.314	0.0937	No
21	Ugp2	1959	0.311	0.1001	No
22	Copb2	2107	0.293	0.0961	No
23	Vegfa	2379	0.264	0.0812	No
24	Mpi	2439	0.259	0.0834	No
25	Got2	2734	0.231	0.0657	No
26	Chst12	2883	0.219	0.0596	No
27	Gpc1	2904	0.216	0.0638	No
28	Tpi1	2909	0.215	0.0693	No
29	Arpp19	3029	0.203	0.0651	No
30	Col5a1	3137	0.194	0.0617	No
31	Stmn1	3146	0.193	0.0662	No
32	Hs6st2	3165	0.191	0.0699	No
33	Cln6	3179	0.189	0.0740	No
34	Chpf2	3232	0.184	0.0748	No
35	Gne	3236	0.184	0.0795	No
36	Gpc3	3244	0.183	0.0839	No
37	Slc37a4	3377	0.173	0.0778	No
38	Plod1	3413	0.171	0.0796	No
39	Pgls	3430	0.169	0.0829	No
40	Dld	3479	0.164	0.0834	No
41	Txn1	3500	0.162	0.0861	No
42	Hs2st1	3515	0.160	0.0893	No
43	Slc25a10	3613	0.152	0.0856	No
44	Rpe	3708	0.143	0.0818	No
45	Pygl	3757	0.138	0.0816	No
46	Irs2	3858	0.132	0.0770	No
47	Gnpda1	3921	0.129	0.0755	No
48	Glce	4108	0.115	0.0635	No
49	Gmppa	4390	0.091	0.0431	No
50	Ddit4	4690	0.068	0.0206	No
51	Alg1	4763	0.064	0.0165	No
52	Cog2	4799	0.062	0.0153	No
53	Ext1	4814	0.061	0.0158	No
54	Nasp	4845	0.058	0.0150	No
55	Hmmr	4926	0.053	0.0099	No
56	Phka2	4982	0.050	0.0068	No
57	Pkm	5124	0.041	-0.0036	No
58	Sdc2	5269	0.032	-0.0144	No
59	Galk2	5336	0.028	-0.0190	No
60	Gpc4	5393	0.025	-0.0229	No
61	Hspa5	5579	0.012	-0.0376	No
62	Aldoa	5614	0.009	-0.0401	No
63	Egln3	5639	0.007	-0.0419	No
64	Pmm2	5754	-0.001	-0.0511	No
65	Hax1	5800	-0.004	-0.0547	No
66	Pdk3	5988	-0.017	-0.0694	No
67	Ext2	5991	-0.017	-0.0691	No
68	Polr3k	6047	-0.022	-0.0730	No
69	Bpnt1	6137	-0.029	-0.0795	No
70	Casp6	6285	-0.039	-0.0904	No
71	Ak3	6350	-0.044	-0.0944	No
72	B3galt6	6496	-0.053	-0.1047	No
73	Xylt2	6610	-0.061	-0.1123	No
74	Nanp	6629	-0.062	-0.1121	No
75	Sap30	6639	-0.062	-0.1111	No
76	Got1	6825	-0.076	-0.1241	No
77	Pygb	6917	-0.081	-0.1293	No
78	Kif2a	6984	-0.086	-0.1324	No
79	Nsdhl	7035	-0.089	-0.1340	No
80	Kif20a	7131	-0.097	-0.1391	No
81	Fut8	7135	-0.097	-0.1367	No
82	Pgk1	7214	-0.102	-0.1403	No
83	Mxi1	7379	-0.112	-0.1506	No
84	Depdc1a	7449	-0.116	-0.1531	No
85	Homer1	7506	-0.120	-0.1544	No
86	Sod1	7557	-0.122	-0.1552	No
87	Gfpt1	7577	-0.124	-0.1534	No
88	Prps1	7637	-0.129	-0.1547	No
89	Paxip1	7669	-0.131	-0.1536	No
90	Slc35a3	7753	-0.135	-0.1567	No
91	Me2	7787	-0.138	-0.1557	No
92	Pfkp	7839	-0.141	-0.1560	No
93	Mdh1	7852	-0.142	-0.1531	No
94	Cyb5a	7870	-0.144	-0.1506	No
95	Cited2	7954	-0.148	-0.1533	No
96	Isg20	7957	-0.148	-0.1495	No
97	G6pdx	8061	-0.157	-0.1536	No
98	Ecd	8121	-0.161	-0.1541	No
99	Gclc	8129	-0.162	-0.1502	No
100	Ppp2cb	8299	-0.175	-0.1593	No
101	Aurka	8325	-0.177	-0.1565	No
102	Med24	8351	-0.179	-0.1537	No
103	Ier3	8367	-0.180	-0.1500	No
104	Agl	8461	-0.186	-0.1526	No
105	Ndufv3	8525	-0.190	-0.1525	No
106	Qsox1	8866	-0.217	-0.1743	No
107	Gale	8935	-0.222	-0.1738	No
108	Pgam1	9240	-0.247	-0.1919	No
109	Mif	9243	-0.248	-0.1853	No
110	Sdhc	9354	-0.255	-0.1874	No
111	Hdlbp	9393	-0.258	-0.1835	No
112	Vldlr	9450	-0.262	-0.1810	No
113	Chst1	9467	-0.262	-0.1752	No
114	Pfkfb1	9475	-0.263	-0.1686	No
115	B3gat3	9586	-0.272	-0.1702	No
116	Gfus	9721	-0.282	-0.1735	No
117	Plod2	9796	-0.288	-0.1717	No
118	P4ha1	9829	-0.291	-0.1664	No
119	Abcb6	9943	-0.301	-0.1675	No
120	Lhpp	9995	-0.306	-0.1634	No
121	Agrn	10007	-0.307	-0.1560	No
122	Aldh7a1	10099	-0.315	-0.1548	No
123	Fam162a	10236	-0.329	-0.1570	No
124	Lct	10340	-0.341	-0.1561	No
125	Rbck1	10517	-0.359	-0.1607	No
126	Galk1	10525	-0.360	-0.1516	No
127	Slc16a3	10569	-0.366	-0.1452	No
128	Tpst1	10886	-0.401	-0.1600	No
129	Gmppb	11717	-0.533	-0.2131	Yes
130	Idh1	11793	-0.557	-0.2041	Yes
131	Cenpa	11799	-0.560	-0.1893	Yes
132	Akr1a1	11857	-0.576	-0.1784	Yes
133	B4galt1	11959	-0.607	-0.1702	Yes
134	Cxcr4	11988	-0.617	-0.1558	Yes
135	Mdh2	12043	-0.633	-0.1431	Yes
136	Hk2	12122	-0.668	-0.1313	Yes
137	Zfp292	12197	-0.707	-0.1183	Yes
138	Ldha	12252	-0.745	-0.1025	Yes
139	Glrx	12255	-0.747	-0.0824	Yes
140	Aldh9a1	12274	-0.767	-0.0631	Yes
141	Idua	12290	-0.779	-0.0433	Yes
142	Fkbp4	12393	-0.946	-0.0260	Yes
143	Taldo1	12421	-1.103	0.0016	Yes