Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group2_versus_Group4.Mast_Pheno.cls #Group2_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.22068353
Normalized Enrichment Score (NES)	-0.9253848
Nominal p-value	0.5996094
FDR q-value	0.92614967
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Usp16	25	1.016	0.0298	No
2	Pik3r5	34	0.973	0.0596	No
3	Gmfb	247	0.678	0.0636	No
4	Prkcd	446	0.587	0.0659	No
5	Plaur	572	0.550	0.0729	No
6	Pdp1	738	0.501	0.0752	No
7	Adam9	757	0.497	0.0893	No
8	Rbsn	1041	0.441	0.0802	No
9	Gngt2	1075	0.435	0.0911	No
10	Lgals3	1081	0.435	0.1043	No
11	Ctsb	1096	0.434	0.1167	No
12	Lcp2	1107	0.432	0.1295	No
13	Raf1	1167	0.425	0.1380	No
14	Gp1ba	1276	0.406	0.1419	No
15	Irf1	1292	0.404	0.1533	No
16	Gzmb	1388	0.389	0.1578	No
17	Kcnip2	1618	0.356	0.1503	No
18	Tnfaip3	1645	0.352	0.1592	No
19	Plek	1700	0.345	0.1656	No
20	Brpf3	1940	0.313	0.1561	No
21	Ctsc	2091	0.295	0.1531	No
22	Cd46	2156	0.286	0.1569	No
23	Dyrk2	2191	0.282	0.1629	No
24	Kcnip3	2645	0.239	0.1337	No
25	Cblb	2696	0.235	0.1369	No
26	Grb2	2772	0.228	0.1380	No
27	Gng2	2789	0.227	0.1438	No
28	Lipa	3011	0.206	0.1323	No
29	Gnai3	3253	0.182	0.1185	No
30	Vcpip1	3343	0.175	0.1167	No
31	Ppp4c	3455	0.167	0.1129	No
32	Jak2	3636	0.150	0.1030	No
33	Pim1	3651	0.148	0.1065	No
34	Fyn	3693	0.144	0.1077	No
35	Fdx1	3715	0.142	0.1104	No
36	Spock2	3795	0.136	0.1083	No
37	Gca	4048	0.119	0.0916	No
38	Cdh13	4089	0.116	0.0920	No
39	Casp1	4181	0.109	0.0880	No
40	Irf7	4236	0.104	0.0869	No
41	Casp3	4269	0.101	0.0874	No
42	Stx4a	4448	0.086	0.0757	No
43	Usp8	4517	0.081	0.0727	No
44	Fcer1g	4555	0.079	0.0722	No
45	Il6	4754	0.064	0.0581	No
46	Dusp6	4851	0.058	0.0521	No
47	Pik3ca	4882	0.057	0.0515	No
48	Rasgrp1	4918	0.054	0.0503	No
49	Gnb4	4978	0.050	0.0471	No
50	Xpnpep1	5029	0.047	0.0445	No
51	Dgkg	5073	0.044	0.0424	No
52	Psen1	5222	0.035	0.0315	No
53	Rce1	5391	0.025	0.0187	No
54	Cpq	5401	0.024	0.0187	No
55	Hspa5	5579	0.012	0.0047	No
56	Atox1	5590	0.011	0.0042	No
57	S100a9	5721	0.000	-0.0063	No
58	Lap3	5741	-0.000	-0.0079	No
59	Usp15	5744	-0.000	-0.0080	No
60	Lamp2	5783	-0.003	-0.0110	No
61	Dock9	5976	-0.016	-0.0261	No
62	Gnai2	6015	-0.019	-0.0286	No
63	Cdk5r1	6144	-0.029	-0.0380	No
64	Akap10	6357	-0.044	-0.0539	No
65	S100a13	6379	-0.046	-0.0541	No
66	Casp4	6723	-0.069	-0.0798	No
67	Zeb1	6756	-0.071	-0.0802	No
68	Gnb2	6763	-0.071	-0.0785	No
69	Itgam	6977	-0.085	-0.0931	No
70	Kif2a	6984	-0.086	-0.0909	No
71	Rnf4	7838	-0.141	-0.1557	No
72	Lta4h	8014	-0.153	-0.1651	No
73	C2	8082	-0.159	-0.1655	No
74	Timp2	8182	-0.166	-0.1684	No
75	Ppp2cb	8299	-0.175	-0.1723	No
76	Ctsd	8502	-0.189	-0.1828	No
77	Car2	8680	-0.202	-0.1908	No
78	Ehd1	8720	-0.205	-0.1876	No
79	Anxa5	8745	-0.207	-0.1831	No
80	Rabif	8856	-0.216	-0.1852	No
81	Gpd2	9193	-0.243	-0.2049	No
82	Irf2	9252	-0.248	-0.2018	No
83	Casp7	9414	-0.259	-0.2068	No
84	Sh2b3	9514	-0.267	-0.2065	No
85	Casp9	9690	-0.279	-0.2119	Yes
86	Prep	9723	-0.282	-0.2057	Yes
87	Dusp5	9863	-0.294	-0.2078	Yes
88	Plscr1	10008	-0.307	-0.2099	Yes
89	Ctso	10075	-0.313	-0.2054	Yes
90	Mmp14	10144	-0.320	-0.2009	Yes
91	Gata3	10251	-0.331	-0.1992	Yes
92	Dock4	10267	-0.332	-0.1900	Yes
93	C3	10326	-0.339	-0.1841	Yes
94	Usp14	10481	-0.354	-0.1855	Yes
95	Serpinc1	10574	-0.366	-0.1815	Yes
96	Dpp4	10660	-0.375	-0.1767	Yes
97	Dock10	10685	-0.379	-0.1668	Yes
98	Pik3cg	10711	-0.382	-0.1568	Yes
99	Prcp	10718	-0.384	-0.1453	Yes
100	Msrb1	10948	-0.411	-0.1510	Yes
101	Prdm4	10990	-0.416	-0.1414	Yes
102	Src	11229	-0.447	-0.1467	Yes
103	Calm3	11434	-0.481	-0.1482	Yes
104	Was	11514	-0.493	-0.1392	Yes
105	Cr2	11524	-0.495	-0.1244	Yes
106	Calm1	11607	-0.512	-0.1151	Yes
107	Csrp1	11646	-0.519	-0.1019	Yes
108	Pla2g4a	11686	-0.526	-0.0886	Yes
109	Ctsl	11745	-0.542	-0.0764	Yes
110	Phex	11758	-0.546	-0.0602	Yes
111	Lyn	11807	-0.562	-0.0466	Yes
112	Pfn1	11811	-0.563	-0.0292	Yes
113	F8	11978	-0.613	-0.0235	Yes
114	Sirt6	11991	-0.618	-0.0051	Yes
115	Rhog	12028	-0.628	0.0116	Yes
116	Psmb9	12179	-0.698	0.0213	Yes