Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group2_versus_Group4.Mast_Pheno.cls #Group2_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.24648206
Normalized Enrichment Score (NES)	0.98876774
Nominal p-value	0.46653143
FDR q-value	1.0
FWER p-Value	0.995

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Layn	78	0.847	0.0201	Yes
2	Insig1	182	0.727	0.0344	Yes
3	Evl	189	0.721	0.0564	Yes
4	Pten	208	0.709	0.0770	Yes
5	Arhgef6	291	0.651	0.0906	Yes
6	Ptk2	474	0.580	0.0940	Yes
7	Cdk8	562	0.553	0.1042	Yes
8	Lima1	671	0.517	0.1115	Yes
9	Itga9	676	0.516	0.1273	Yes
10	Msn	677	0.516	0.1434	Yes
11	Adam9	757	0.497	0.1525	Yes
12	Nectin2	774	0.494	0.1666	Yes
13	Plcg1	802	0.486	0.1795	Yes
14	Vcl	901	0.465	0.1861	Yes
15	Tsc1	909	0.464	0.2000	Yes
16	Icam2	931	0.460	0.2126	Yes
17	Taok2	1001	0.447	0.2209	Yes
18	Mapk14	1230	0.412	0.2153	Yes
19	Fbn1	1291	0.404	0.2230	Yes
20	Amigo1	1356	0.395	0.2302	Yes
21	Pals1	1398	0.388	0.2389	Yes
22	Akt3	1543	0.367	0.2387	Yes
23	Tmem8b	1606	0.358	0.2448	Yes
24	Vcan	1832	0.325	0.2367	Yes
25	Map4k2	1995	0.308	0.2332	Yes
26	Inppl1	2026	0.304	0.2402	Yes
27	Wasl	2064	0.298	0.2465	Yes
28	Ptprc	2257	0.276	0.2395	No
29	Pik3cb	2296	0.272	0.2449	No
30	Mmp2	2956	0.211	0.1980	No
31	Tjp1	2986	0.209	0.2022	No
32	Ctnna1	3045	0.201	0.2038	No
33	Exoc4	3278	0.180	0.1905	No
34	Sirpa	3281	0.179	0.1960	No
35	Rasa1	3437	0.168	0.1886	No
36	Myh9	3460	0.166	0.1920	No
37	Cercam	3502	0.161	0.1937	No
38	Epb41l2	3685	0.145	0.1835	No
39	Rhof	3819	0.135	0.1769	No
40	Icam5	3828	0.134	0.1804	No
41	Cd34	3882	0.130	0.1802	No
42	Itgb1	4101	0.115	0.1661	No
43	Akt2	4147	0.111	0.1659	No
44	Ywhah	4222	0.105	0.1632	No
45	Stx4a	4448	0.086	0.1476	No
46	Arpc2	4521	0.081	0.1443	No
47	Pard6g	4569	0.078	0.1429	No
48	Nlgn2	4588	0.076	0.1438	No
49	Cdh1	4645	0.071	0.1415	No
50	Cap1	4975	0.050	0.1164	No
51	Pik3r3	5144	0.040	0.1040	No
52	Cd86	5226	0.035	0.0985	No
53	Icam4	5278	0.031	0.0953	No
54	Ikbkg	5390	0.025	0.0871	No
55	Myh10	5527	0.015	0.0765	No
56	Vasp	5578	0.012	0.0728	No
57	Tial1	5895	-0.011	0.0476	No
58	Sgce	5952	-0.015	0.0435	No
59	Gnai2	6015	-0.019	0.0391	No
60	Nrap	6109	-0.027	0.0324	No
61	Ctnnd1	6450	-0.050	0.0063	No
62	Cnn2	6596	-0.059	-0.0036	No
63	Nf2	6652	-0.063	-0.0061	No
64	Zyx	6925	-0.082	-0.0256	No
65	Vwf	6927	-0.082	-0.0231	No
66	Pkd1	7441	-0.116	-0.0611	No
67	Map3k20	7463	-0.117	-0.0591	No
68	Pbx2	7588	-0.125	-0.0653	No
69	Hadh	7789	-0.138	-0.0772	No
70	Ldlrap1	7826	-0.141	-0.0758	No
71	Adam15	7893	-0.145	-0.0766	No
72	Amigo2	7907	-0.146	-0.0731	No
73	Nlgn3	7921	-0.147	-0.0696	No
74	Bmp1	7929	-0.147	-0.0655	No
75	Shc1	7963	-0.149	-0.0636	No
76	Sorbs3	8070	-0.158	-0.0672	No
77	Cd274	8257	-0.171	-0.0770	No
78	Dlg1	8284	-0.174	-0.0737	No
79	Gtf2f1	8292	-0.174	-0.0688	No
80	Hras	8321	-0.177	-0.0656	No
81	Sympk	8330	-0.177	-0.0607	No
82	Cadm2	8447	-0.185	-0.0643	No
83	Itgb4	9222	-0.246	-0.1195	No
84	Syk	9347	-0.255	-0.1216	No
85	Actb	9375	-0.256	-0.1158	No
86	Actn1	9469	-0.263	-0.1151	No
87	Mpzl1	9595	-0.272	-0.1168	No
88	Skap2	9760	-0.285	-0.1212	No
89	Vav2	10015	-0.307	-0.1322	No
90	Itga2	10030	-0.309	-0.1237	No
91	Icam1	10085	-0.314	-0.1183	No
92	Lamb3	10367	-0.344	-0.1304	No
93	Tubg1	10392	-0.347	-0.1215	No
94	Nectin4	10446	-0.352	-0.1149	No
95	Crat	10479	-0.354	-0.1064	No
96	Nectin1	10532	-0.361	-0.0994	No
97	Pecam1	10630	-0.372	-0.0956	No
98	Actg1	10774	-0.389	-0.0951	No
99	Jup	10860	-0.399	-0.0896	No
100	Dhx16	10976	-0.415	-0.0860	No
101	Itga10	11112	-0.434	-0.0834	No
102	Myl12b	11162	-0.439	-0.0737	No
103	Src	11229	-0.447	-0.0651	No
104	Actn4	11454	-0.484	-0.0682	No
105	Atp1a3	11578	-0.506	-0.0624	No
106	Nf1	11654	-0.521	-0.0523	No
107	Rac2	11674	-0.524	-0.0375	No
108	Pfn1	11811	-0.563	-0.0309	No
109	Rsu1	11882	-0.582	-0.0185	No
110	B4galt1	11959	-0.607	-0.0058	No
111	Tspan4	12005	-0.622	0.0100	No
112	Baiap2	12312	-0.812	0.0105	No