DatasetMast.Mast_Pheno.cls
#Group2_versus_Group4.Mast_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMast_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)-0.2511001
Normalized Enrichment Score (NES)-1.0696812
Nominal p-value0.32475248
FDR q-value0.7367349
FWER p-Value0.985
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_ALLOGRAFT_REJECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Akt1360.9680.0232No
2Itk1330.7730.0362No
3Psmb101390.7660.0565No
4Bcl31740.7320.0735No
5Socs52820.6540.0824No
6Stat13540.6250.0935No
7Gpr653590.6230.1100No
8Mrpl33710.6180.1258No
9Ets14120.6040.1388No
10Prkcb10290.4430.1008No
11Il2rg10720.4360.1092No
12Lcp211070.4320.1181No
13Il1611770.4240.1239No
14Prf111780.4240.1353No
15Igsf612230.4150.1430No
16Elane12630.4080.1508No
17Stat413600.3940.1536No
18Gzmb13880.3890.1620No
19Tnf14270.3830.1692No
20Cd9616850.3480.1577No
21Tgfb219210.3140.1472No
22Pf420230.3040.1471No
23Ltb22460.2770.1366No
24Ptprc22570.2760.1432No
25Irf824180.2610.1373No
26Eif4g326110.2420.1282No
27H2-Oa27200.2320.1257No
28Capg27950.2260.1258No
29Il12rb128190.2240.1300No
30Cd4729830.2090.1224No
31Ly8631000.1970.1183No
32Abi134040.1710.0984No
33Jak236360.1500.0837No
34Galnt136940.1440.0829No
35Dyrk337100.1430.0855No
36Ube2n38800.1300.0754No
37Irf742360.1040.0493No
38Cd24744730.0840.0325No
39Il27ra46560.0700.0196No
40Il647540.0640.0135No
41Ly7548240.0600.0095No
42Map3k749000.0550.0049No
43Cd8652260.035-0.0205No
44Csf152640.032-0.0227No
45Acvr2a55110.016-0.0422No
46Il45746-0.000-0.0612No
47Eif3j15808-0.004-0.0660No
48Ikbkb6003-0.018-0.0813No
49Ncf46039-0.022-0.0835No
50Tap16134-0.028-0.0904No
51Tlr66164-0.030-0.0919No
52St8sia46177-0.031-0.0921No
53Cd1d26427-0.049-0.1109No
54Nck16722-0.069-0.1329No
55Il18rap7205-0.101-0.1693No
56Hcls17238-0.103-0.1691No
57Ccnd37289-0.106-0.1703No
58Srgn7407-0.114-0.1767No
59H2-Ob7464-0.117-0.1781No
60Ifngr17497-0.119-0.1775No
61Csk7622-0.128-0.1841No
62Eif3a7632-0.128-0.1814No
63Tapbp7667-0.131-0.1806No
64Itgb28059-0.157-0.2081No
65Npm18081-0.159-0.2055No
66C28082-0.159-0.2012No
67Ccr18251-0.171-0.2102No
68Rpl98403-0.183-0.2175No
69Gcnt18421-0.184-0.2140No
70Il78445-0.185-0.2108No
71Ache8615-0.197-0.2192No
72F2r8656-0.200-0.2171No
73Elf48798-0.211-0.2228No
74Spi19106-0.236-0.2414No
75Mtif29161-0.241-0.2393No
76Traf29207-0.244-0.2363No
77Ccr29390-0.257-0.2442Yes
78Il189416-0.259-0.2392Yes
79Map4k19427-0.260-0.2330Yes
80Ccnd29517-0.267-0.2330Yes
81H2-DMa9555-0.269-0.2288Yes
82Trat19672-0.278-0.2307Yes
83Abce19744-0.284-0.2288Yes
84Prkcg9786-0.287-0.2244Yes
85Hif1a9917-0.299-0.2268Yes
86Ifngr29933-0.301-0.2199Yes
87Brca110047-0.311-0.2207Yes
88Icam110085-0.314-0.2153Yes
89Tap210135-0.319-0.2106Yes
90Il1510287-0.335-0.2138Yes
91Ptpn610377-0.345-0.2118Yes
92Ccr510413-0.349-0.2052Yes
93Cfp10550-0.363-0.2064Yes
94Eif5a10572-0.366-0.1983Yes
95Ripk210703-0.381-0.1985Yes
96Nme110823-0.394-0.1976Yes
97Glmn10843-0.396-0.1884Yes
98Tpd5211192-0.443-0.2047Yes
99Il4ra11300-0.459-0.2010Yes
100Ifnar211323-0.463-0.1903Yes
101Rps3a111424-0.479-0.1855Yes
102Fcgr2b11497-0.492-0.1781Yes
103Was11514-0.493-0.1661Yes
104Wars111528-0.496-0.1538Yes
105Ube2d111651-0.521-0.1496Yes
106Hdac911776-0.553-0.1448Yes
107Lyn11807-0.562-0.1320Yes
108B2m11905-0.592-0.1239Yes
109Rps911989-0.618-0.1140Yes
110Il12a12008-0.623-0.0987Yes
111Degs112065-0.640-0.0860Yes
112Bcl1012067-0.641-0.0688Yes
113Tgfb112207-0.714-0.0608Yes
114Itgal12278-0.771-0.0457Yes
115Flna12308-0.803-0.0264Yes
116Eif3d12436-1.3750.0004Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_ALLOGRAFT_REJECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_ALLOGRAFT_REJECTION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_ALLOGRAFT_REJECTION