Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group2_versus_Group4.Mast_Pheno.cls #Group2_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ADIPOGENESIS
Enrichment Score (ES)	-0.32076007
Normalized Enrichment Score (NES)	-1.4155922
Nominal p-value	0.025793651
FDR q-value	0.46207848
FWER p-Value	0.527

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Stom	38	0.953	0.0167	No
2	Dhrs7	251	0.675	0.0135	No
3	Coq9	277	0.657	0.0251	No
4	Preb	318	0.639	0.0351	No
5	Map4k3	444	0.588	0.0372	No
6	Idh3a	454	0.586	0.0486	No
7	Ccng2	623	0.535	0.0461	No
8	Angptl4	715	0.509	0.0492	No
9	Ak2	804	0.485	0.0522	No
10	Uqcr10	822	0.481	0.0608	No
11	Atl2	887	0.468	0.0653	No
12	Ppm1b	954	0.453	0.0693	No
13	G3bp2	1036	0.442	0.0719	No
14	Phldb1	1058	0.437	0.0793	No
15	Gpx4	1098	0.434	0.0851	No
16	Acadm	1211	0.419	0.0847	No
17	Fah	1337	0.397	0.0828	No
18	Ndufab1	1635	0.353	0.0660	No
19	Agpat3	1786	0.332	0.0606	No
20	Mtarc2	1964	0.311	0.0527	No
21	Qdpr	2327	0.269	0.0288	No
22	Mgll	2451	0.258	0.0242	No
23	Chuk	2492	0.253	0.0262	No
24	Phyh	2523	0.250	0.0289	No
25	Slc27a1	2613	0.242	0.0267	No
26	Decr1	2710	0.233	0.0237	No
27	Ptcd3	2748	0.230	0.0255	No
28	Pex14	2838	0.223	0.0229	No
29	Ppp1r15b	2895	0.217	0.0228	No
30	Acox1	3065	0.199	0.0132	No
31	Gphn	3068	0.199	0.0172	No
32	Cdkn2c	3090	0.198	0.0196	No
33	Itsn1	3111	0.197	0.0221	No
34	Cd151	3212	0.186	0.0178	No
35	Dld	3479	0.164	-0.0005	No
36	Slc25a10	3613	0.152	-0.0081	No
37	Dhcr7	3619	0.152	-0.0054	No
38	Ubqln1	3643	0.149	-0.0042	No
39	Abca1	3713	0.142	-0.0068	No
40	Nmt1	3762	0.138	-0.0079	No
41	Reep5	3818	0.135	-0.0095	No
42	Elmod3	3962	0.126	-0.0186	No
43	Pdcd4	4132	0.112	-0.0300	No
44	Riok3	4186	0.109	-0.0321	No
45	Aplp2	4237	0.104	-0.0340	No
46	Nabp1	4389	0.091	-0.0444	No
47	Tob1	4540	0.080	-0.0549	No
48	Immt	4678	0.069	-0.0647	No
49	Sorbs1	4731	0.066	-0.0675	No
50	Rnf11	4742	0.065	-0.0670	No
51	Nkiras1	4947	0.052	-0.0825	No
52	Dgat1	4971	0.051	-0.0833	No
53	Pgm1	5084	0.043	-0.0915	No
54	Miga2	5541	0.014	-0.1284	No
55	Aldoa	5614	0.009	-0.1341	No
56	Bcl6	5648	0.006	-0.1366	No
57	Mccc1	5697	0.002	-0.1405	No
58	Dlat	5801	-0.004	-0.1488	No
59	Cavin1	5849	-0.008	-0.1525	No
60	Rmdn3	5875	-0.010	-0.1543	No
61	Cpt2	5956	-0.015	-0.1605	No
62	Rtn3	6428	-0.049	-0.1978	No
63	Mgst3	6433	-0.049	-0.1971	No
64	Pemt	6438	-0.049	-0.1964	No
65	Cs	6488	-0.052	-0.1993	No
66	Baz2a	6511	-0.054	-0.2000	No
67	Plin2	6784	-0.073	-0.2206	No
68	Ucp2	6833	-0.076	-0.2229	No
69	Slc5a6	6903	-0.080	-0.2269	No
70	Adcy6	6963	-0.084	-0.2299	No
71	Retsat	7227	-0.103	-0.2492	No
72	Samm50	7287	-0.106	-0.2518	No
73	Tank	7345	-0.110	-0.2541	No
74	Idh3g	7408	-0.114	-0.2568	No
75	Ifngr1	7497	-0.119	-0.2615	No
76	Sod1	7557	-0.122	-0.2638	No
77	Scp2	7583	-0.125	-0.2632	No
78	Hadh	7789	-0.138	-0.2770	No
79	Esrra	7808	-0.139	-0.2756	No
80	Ghitm	7831	-0.141	-0.2745	No
81	Uck1	7908	-0.146	-0.2776	No
82	Cox8a	8023	-0.154	-0.2837	No
83	Bckdha	8140	-0.163	-0.2898	No
84	Apoe	8273	-0.172	-0.2969	No
85	Angpt1	8314	-0.176	-0.2965	No
86	Suclg1	8348	-0.179	-0.2955	No
87	Acly	8373	-0.181	-0.2937	No
88	Rreb1	8382	-0.181	-0.2906	No
89	Mrpl15	8422	-0.184	-0.2899	No
90	Mtch2	8464	-0.186	-0.2894	No
91	Cat	8560	-0.192	-0.2931	No
92	Cox7b	8613	-0.197	-0.2933	No
93	Ech1	8671	-0.202	-0.2937	No
94	Elovl6	8722	-0.205	-0.2935	No
95	Coq5	8739	-0.207	-0.2905	No
96	Ndufs3	8747	-0.207	-0.2868	No
97	Grpel1	8788	-0.210	-0.2857	No
98	Uqcrq	8861	-0.216	-0.2870	No
99	Adipor2	8899	-0.219	-0.2855	No
100	Scarb1	8909	-0.220	-0.2816	No
101	Atp1b3	9034	-0.229	-0.2870	No
102	Dnajb9	9074	-0.233	-0.2853	No
103	Gpd2	9193	-0.243	-0.2899	No
104	Aco2	9206	-0.244	-0.2858	No
105	Gpat4	9283	-0.251	-0.2867	No
106	Ddt	9332	-0.253	-0.2854	No
107	Sdhc	9354	-0.255	-0.2818	No
108	Ptger3	9372	-0.256	-0.2779	No
109	Tkt	9671	-0.278	-0.2963	No
110	Bcl2l13	9972	-0.304	-0.3144	Yes
111	Uqcrc1	10004	-0.306	-0.3106	Yes
112	Dram2	10050	-0.311	-0.3078	Yes
113	Jagn1	10095	-0.315	-0.3048	Yes
114	Ndufb7	10131	-0.318	-0.3011	Yes
115	Echs1	10171	-0.322	-0.2975	Yes
116	Cmpk1	10268	-0.333	-0.2984	Yes
117	Gbe1	10323	-0.339	-0.2958	Yes
118	C3	10326	-0.339	-0.2889	Yes
119	Itih5	10368	-0.344	-0.2851	Yes
120	Stat5a	10476	-0.354	-0.2864	Yes
121	Crat	10479	-0.354	-0.2792	Yes
122	Pfkfb3	10568	-0.366	-0.2788	Yes
123	Hibch	10698	-0.380	-0.2814	Yes
124	Por	10717	-0.383	-0.2749	Yes
125	Lpcat3	10756	-0.388	-0.2699	Yes
126	Cyc1	10776	-0.390	-0.2634	Yes
127	Slc19a1	10812	-0.393	-0.2581	Yes
128	Sdhb	10829	-0.395	-0.2512	Yes
129	Acads	10892	-0.402	-0.2478	Yes
130	Ubc	10941	-0.410	-0.2432	Yes
131	Vegfb	10958	-0.412	-0.2360	Yes
132	Uqcr11	10992	-0.416	-0.2300	Yes
133	Slc25a1	11045	-0.425	-0.2254	Yes
134	Pim3	11050	-0.425	-0.2169	Yes
135	Araf	11239	-0.448	-0.2229	Yes
136	Acadl	11307	-0.460	-0.2188	Yes
137	Cox6a1	11319	-0.462	-0.2100	Yes
138	Prdx3	11350	-0.467	-0.2028	Yes
139	Ywhag	11449	-0.483	-0.2007	Yes
140	Dhrs7b	11551	-0.500	-0.1986	Yes
141	Gpam	11617	-0.514	-0.1932	Yes
142	Aifm1	11709	-0.531	-0.1895	Yes
143	Ndufa5	11716	-0.533	-0.1789	Yes
144	Slc1a5	11752	-0.544	-0.1705	Yes
145	Idh1	11793	-0.557	-0.1622	Yes
146	Pfkl	11800	-0.560	-0.1510	Yes
147	Aldh2	11901	-0.589	-0.1469	Yes
148	Lipe	11906	-0.592	-0.1349	Yes
149	Dnajc15	11945	-0.605	-0.1255	Yes
150	Esyt1	11950	-0.606	-0.1132	Yes
151	Mdh2	12043	-0.633	-0.1075	Yes
152	Arl4a	12050	-0.634	-0.0949	Yes
153	Etfb	12086	-0.647	-0.0842	Yes
154	Gadd45a	12109	-0.660	-0.0723	Yes
155	Dbt	12264	-0.756	-0.0691	Yes
156	Coq3	12299	-0.787	-0.0556	Yes
157	Acaa2	12402	-0.982	-0.0434	Yes
158	Taldo1	12421	-1.103	-0.0220	Yes
159	Abcb8	12424	-1.132	0.0014	Yes