Details for gene set HALLMARK_P53

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group2_versus_Group3.Mast_Pheno.cls #Group2_versus_Group3_repos
Phenotype	Mast_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_P53_PATHWAY
Enrichment Score (ES)	-0.33830544
Normalized Enrichment Score (NES)	-1.4822049
Nominal p-value	0.0
FDR q-value	0.48053762
FWER p-Value	0.377

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cd82	32	0.951	0.0191	No
2	Hexim1	276	0.663	0.0145	No
3	Jun	441	0.595	0.0147	No
4	Rb1	603	0.541	0.0140	No
5	Rchy1	713	0.515	0.0169	No
6	Slc35d1	744	0.508	0.0260	No
7	Tgfa	910	0.467	0.0233	No
8	Cdh13	1019	0.448	0.0247	No
9	Ier5	1204	0.417	0.0193	No
10	Ccnk	1435	0.381	0.0093	No
11	Tob1	1455	0.378	0.0164	No
12	Hint1	1464	0.377	0.0243	No
13	Cdkn1a	1465	0.376	0.0329	No
14	Ppp1r15a	1507	0.370	0.0380	No
15	Stom	1509	0.370	0.0464	No
16	Rnf19b	1636	0.353	0.0442	No
17	Slc19a2	1666	0.348	0.0498	No
18	Cyfip2	1725	0.338	0.0528	No
19	Ercc5	1735	0.337	0.0597	No
20	Prkab1	1890	0.318	0.0545	No
21	Osgin1	1988	0.307	0.0536	No
22	Ddit4	2010	0.304	0.0588	No
23	Bax	2106	0.294	0.0578	No
24	H1f2	2169	0.285	0.0593	No
25	Btg1	2355	0.269	0.0504	No
26	Cdk5r1	2428	0.264	0.0505	No
27	Trafd1	2552	0.251	0.0463	No
28	Ada	2643	0.242	0.0445	No
29	S100a10	2708	0.236	0.0447	No
30	Sat1	3013	0.206	0.0246	No
31	Prmt2	3074	0.200	0.0243	No
32	Ddb2	3112	0.197	0.0258	No
33	Fos	3188	0.190	0.0241	No
34	Ccp110	3266	0.184	0.0220	No
35	Fbxw7	3271	0.183	0.0259	No
36	Ctsf	3290	0.182	0.0286	No
37	Cgrrf1	3342	0.178	0.0285	No
38	Rrp8	3375	0.176	0.0299	No
39	Ccnd3	3413	0.173	0.0308	No
40	Retsat	3548	0.161	0.0236	No
41	Zfp36l1	3611	0.157	0.0222	No
42	Tcn2	3630	0.155	0.0242	No
43	Notch1	3690	0.150	0.0229	No
44	Mxd1	3789	0.143	0.0182	No
45	Nol8	3930	0.132	0.0098	No
46	Txnip	4115	0.117	-0.0025	No
47	Tsc22d1	4528	0.084	-0.0341	No
48	Sesn1	4747	0.070	-0.0502	No
49	Pcna	4853	0.064	-0.0573	No
50	Klk8	4887	0.061	-0.0585	No
51	Bak1	4924	0.060	-0.0601	No
52	Iscu	4969	0.056	-0.0624	No
53	Abcc5	5182	0.042	-0.0787	No
54	Dgka	5189	0.041	-0.0783	No
55	App	5344	0.031	-0.0901	No
56	Casp1	5429	0.025	-0.0964	No
57	Ninj1	5531	0.018	-0.1042	No
58	Rxra	5555	0.017	-0.1056	No
59	H2ac25	5655	0.010	-0.1134	No
60	Polh	5682	0.009	-0.1154	No
61	Mapkapk3	5719	0.007	-0.1181	No
62	Zbtb16	5817	0.000	-0.1260	No
63	Dnttip2	5947	-0.008	-0.1363	No
64	Sec61a1	6208	-0.026	-0.1569	No
65	Triap1	6270	-0.031	-0.1611	No
66	Plxnb2	6552	-0.051	-0.1828	No
67	Rab40c	6574	-0.052	-0.1833	No
68	Tap1	6581	-0.053	-0.1826	No
69	Trp53	6743	-0.064	-0.1943	No
70	Hdac3	6798	-0.068	-0.1971	No
71	Apaf1	6986	-0.082	-0.2104	No
72	Plk3	7018	-0.084	-0.2110	No
73	Xpc	7066	-0.088	-0.2128	No
74	Kif13b	7075	-0.089	-0.2115	No
75	Rad9a	7088	-0.090	-0.2104	No
76	Acvr1b	7120	-0.091	-0.2108	No
77	Vamp8	7334	-0.105	-0.2257	No
78	Cdkn2aip	7394	-0.110	-0.2280	No
79	Gadd45a	7411	-0.111	-0.2268	No
80	Wwp1	7464	-0.114	-0.2284	No
81	Slc3a2	7505	-0.117	-0.2290	No
82	Elp1	7661	-0.127	-0.2387	No
83	Dram1	7769	-0.135	-0.2443	No
84	Btg2	7875	-0.144	-0.2496	No
85	Fuca1	8085	-0.158	-0.2630	No
86	Zmat3	8137	-0.162	-0.2634	No
87	Vdr	8200	-0.166	-0.2647	No
88	Irag2	8349	-0.176	-0.2727	No
89	Cebpa	8378	-0.177	-0.2710	No
90	Sphk1	8572	-0.191	-0.2823	No
91	Itgb4	8764	-0.206	-0.2931	No
92	Rps27l	8784	-0.208	-0.2899	No
93	Ptpre	8858	-0.213	-0.2910	No
94	Pidd1	8919	-0.218	-0.2909	No
95	Vwa5a	9017	-0.226	-0.2936	No
96	Rps12	9343	-0.252	-0.3143	No
97	Pom121	9374	-0.255	-0.3109	No
98	Tm7sf3	9381	-0.255	-0.3056	No
99	Abat	9416	-0.258	-0.3024	No
100	Mdm2	9607	-0.273	-0.3117	No
101	Blcap	9618	-0.273	-0.3062	No
102	Ei24	9650	-0.276	-0.3024	No
103	Rap2b	9818	-0.291	-0.3094	No
104	Rhbdf2	9922	-0.301	-0.3109	No
105	Tspyl2	10039	-0.313	-0.3132	No
106	Pvt1	10349	-0.345	-0.3304	Yes
107	Ddit3	10359	-0.346	-0.3233	Yes
108	Tax1bp3	10460	-0.356	-0.3233	Yes
109	H2aj	10539	-0.365	-0.3213	Yes
110	Traf4	10550	-0.366	-0.3137	Yes
111	Foxo3	10553	-0.366	-0.3055	Yes
112	Ndrg1	10556	-0.366	-0.2973	Yes
113	Coq8a	10600	-0.372	-0.2923	Yes
114	Csrnp2	10669	-0.380	-0.2892	Yes
115	Irak1	10692	-0.384	-0.2822	Yes
116	Cd81	10785	-0.392	-0.2807	Yes
117	Tgfb1	10813	-0.397	-0.2738	Yes
118	Rpl18	10817	-0.397	-0.2650	Yes
119	Ralgds	10819	-0.398	-0.2560	Yes
120	Def6	10848	-0.401	-0.2491	Yes
121	Ctsd	10893	-0.408	-0.2434	Yes
122	Hspa4l	10972	-0.418	-0.2402	Yes
123	Sertad3	11015	-0.423	-0.2339	Yes
124	Sp1	11024	-0.424	-0.2249	Yes
125	Ip6k2	11074	-0.429	-0.2191	Yes
126	Ptpn14	11127	-0.436	-0.2133	Yes
127	Pmm1	11184	-0.443	-0.2078	Yes
128	Mxd4	11292	-0.461	-0.2060	Yes
129	Baiap2	11348	-0.470	-0.1997	Yes
130	Dcxr	11387	-0.475	-0.1919	Yes
131	Gm2a	11393	-0.476	-0.1815	Yes
132	Fam162a	11401	-0.477	-0.1712	Yes
133	Hras	11440	-0.483	-0.1632	Yes
134	Ccng1	11539	-0.501	-0.1597	Yes
135	Abhd4	11609	-0.515	-0.1536	Yes
136	Pitpnc1	11611	-0.516	-0.1419	Yes
137	Ier3	11689	-0.534	-0.1359	Yes
138	F2r	11789	-0.560	-0.1312	Yes
139	Ankra2	11816	-0.567	-0.1204	Yes
140	Mknk2	11834	-0.572	-0.1087	Yes
141	Rack1	11868	-0.584	-0.0980	Yes
142	Fdxr	11878	-0.587	-0.0854	Yes
143	Aen	11888	-0.589	-0.0727	Yes
144	Steap3	11970	-0.613	-0.0652	Yes
145	Wrap73	12131	-0.685	-0.0626	Yes
146	Ppm1d	12301	-0.819	-0.0577	Yes
147	Tprkb	12325	-0.843	-0.0403	Yes
148	Ccnd2	12383	-0.932	-0.0236	Yes
149	Rpl36	12436	-1.236	0.0004	Yes