DatasetMast.Mast_Pheno.cls
#Group2_versus_Group3.Mast_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeMast_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.2742854
Normalized Enrichment Score (NES)-1.145392
Nominal p-value0.23483366
FDR q-value0.81217694
FWER p-Value0.974
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Eci1151.0430.0207No
2Fdx1380.9340.0385No
3Glud11500.7360.0450No
4Ndufb51540.7350.0602No
5Immt2240.6940.0691No
6Vdac12250.6930.0837No
7Timm17a2420.6840.0968No
8Atp1b12580.6750.1098No
9Gpx43320.6380.1172No
10Idh25570.5560.1107No
11Got26320.5330.1158No
12Acat16880.5210.1223No
13Tcirg17510.5060.1279No
14Cpt1a7630.5030.1376No
15Afg3l27770.4980.1470No
16Pdp18050.4920.1551No
17Slc25a209690.4570.1515No
18Abcb711370.4280.1468No
19Lrpprc15180.3690.1236No
20Atp6v0c17260.3380.1138No
21Ndufb219560.3100.1017No
22Timm8b20140.3040.1034No
23Bax21060.2940.1022No
24Phyh24050.2660.0834No
25Acadsb27460.2320.0606No
26Alas127770.2280.0630No
27Cs28630.2200.0607No
28Opa129480.2110.0582No
29Ndufa529770.2090.0604No
30Cox1030980.1980.0547No
31Atp6v0b31400.1950.0555No
32Dld31520.1940.0587No
33Surf132640.1840.0535No
34Uqcr1032830.1830.0559No
35Ndufs233640.1770.0531No
36Decr134710.1670.0479No
37Ndufa334820.1670.0506No
38Rhot234830.1670.0541No
39Retsat35480.1610.0523No
40Cox1135510.1610.0555No
41Acadvl36270.1560.0527No
42Ndufs136800.1510.0516No
43Ndufa836870.1510.0543No
44Ndufb637510.1460.0522No
45Gpi138480.1390.0473No
46Supv3l138590.1380.0494No
47Oat38950.1350.0494No
48Cox7a242020.1120.0268No
49Pdhb42390.1090.0262No
50Hadhb43440.1000.0198No
51Pmpca44180.0930.0158No
52Hadha44410.0920.0159No
53Ldha45560.0820.0084No
54Dlat45940.0790.0070No
55Slc25a1146020.0790.0081No
56Ndufv146780.0740.0035No
57Hsd17b1047790.069-0.0032No
58Uqcrh48230.066-0.0053No
59Mrps1148730.063-0.0080No
60Aco248920.061-0.0082No
61Aldh6a149170.060-0.0089No
62Tomm70a49220.060-0.0079No
63Fh149290.059-0.0072No
64Iscu49690.056-0.0092No
65Ndufab151740.042-0.0249No
66Uqcrc251980.040-0.0260No
67Ndufs353800.029-0.0401No
68Ndufa454830.022-0.0480No
69Slc25a455410.018-0.0522No
70Uqcrc156930.008-0.0644No
71Prdx357520.004-0.0690No
72Idh3b57590.003-0.0694No
73Casp75950-0.008-0.0848No
74Ogdh6175-0.024-0.1025No
75Timm136200-0.026-0.1039No
76Mtrf16215-0.027-0.1045No
77Nnt6224-0.028-0.1046No
78Mrps126321-0.034-0.1117No
79Acaa1a6325-0.034-0.1112No
80Acaa26348-0.035-0.1123No
81Dlst6371-0.037-0.1133No
82Atp6v0e6389-0.039-0.1139No
83Nqo26509-0.047-0.1226No
84Ndufb36519-0.048-0.1223No
85Ndufb86570-0.052-0.1253No
86Cyc16584-0.053-0.1252No
87Atp6v1g16594-0.053-0.1248No
88Mtrr6625-0.055-0.1261No
89Mrpl116655-0.057-0.1273No
90Cox7b6674-0.059-0.1275No
91Bckdha6750-0.065-0.1322No
92Mrpl156763-0.065-0.1319No
93Mdh16844-0.072-0.1369No
94Uqcr116846-0.072-0.1354No
95Por6847-0.072-0.1339No
96Etfa6997-0.083-0.1443No
97Atp6v1c17015-0.084-0.1439No
98Sdhb7039-0.085-0.1440No
99Ndufb77074-0.089-0.1449No
100Idh3a7114-0.091-0.1462No
101Sdhd7434-0.112-0.1698No
102Cox6c7498-0.116-0.1725No
103Htra27552-0.120-0.1743No
104Tomm227637-0.125-0.1785No
105Atp6v1h7714-0.131-0.1820No
106Fxn7736-0.132-0.1809No
107Sdhc7859-0.142-0.1879No
108Atp6v1d7861-0.142-0.1850No
109Pdha17891-0.144-0.1843No
110Vdac37919-0.147-0.1834No
111Hspa97977-0.151-0.1849No
112Ndufs88013-0.154-0.1845No
113Cox8a8096-0.159-0.1878No
114Slc25a58261-0.170-0.1976No
115Mrps228334-0.175-0.1998No
116Atp6v1f8424-0.181-0.2033No
117Ndufv28440-0.182-0.2007No
118Cyb5a8491-0.185-0.2009No
119Ndufs78637-0.196-0.2086No
120Mfn28670-0.198-0.2070No
121Ndufa68719-0.202-0.2067No
122Mdh28816-0.211-0.2101No
123Mrpl358939-0.220-0.2154No
124Sdha9020-0.227-0.2171No
125Cox7c9110-0.233-0.2195No
126Atp6v1e19185-0.239-0.2205No
127Slc25a129385-0.256-0.2314No
128Etfb9648-0.276-0.2469No
129Echs19906-0.300-0.2616No
130Mrpl3410063-0.315-0.2677Yes
131Cox6a110066-0.316-0.2612Yes
132Ndufa210087-0.318-0.2561Yes
133Ndufa910103-0.319-0.2507Yes
134Idh110190-0.328-0.2508Yes
135Timm5010192-0.328-0.2440Yes
136Uqcrfs110285-0.338-0.2444Yes
137Oxa1l10371-0.347-0.2440Yes
138Timm910440-0.354-0.2421Yes
139Etfdh10473-0.358-0.2372Yes
140Mpc110488-0.359-0.2308Yes
141Grpel110492-0.360-0.2235Yes
142Polr2f10522-0.363-0.2182Yes
143Acadm10586-0.370-0.2156Yes
144Uqcrb10698-0.384-0.2165Yes
145Ndufc110750-0.388-0.2125Yes
146Atp6ap110771-0.391-0.2059Yes
147Hccs10774-0.391-0.1979Yes
148Mgst310821-0.398-0.1933Yes
149Ndufs410851-0.402-0.1872Yes
150Phb210919-0.411-0.1840Yes
151Rhot111022-0.424-0.1834Yes
152Idh3g11051-0.427-0.1767Yes
153Cox5b11073-0.429-0.1694Yes
154Cox1711092-0.432-0.1618Yes
155Ndufa111130-0.436-0.1556Yes
156Cox6b111178-0.442-0.1502Yes
157Suclg111317-0.465-0.1516Yes
158Uqcrq11331-0.467-0.1429Yes
159Sucla211347-0.470-0.1342Yes
160Ech111380-0.474-0.1269Yes
161Mrps1511382-0.474-0.1170Yes
162Cox4i111497-0.493-0.1159Yes
163Atp5pb11501-0.494-0.1058Yes
164Ndufc211558-0.504-0.0998Yes
165Cox7a2l11571-0.506-0.0901Yes
166Timm1011637-0.522-0.0844Yes
167Aifm111671-0.531-0.0760Yes
168Vdac211706-0.539-0.0674Yes
169Mrps3011711-0.540-0.0564Yes
170Mtx211736-0.546-0.0468Yes
171Cox5a11738-0.546-0.0354Yes
172Cox1511776-0.556-0.0268Yes
173Slc25a311939-0.605-0.0272Yes
174Ndufs612030-0.637-0.0212Yes
175Ndufa712226-0.750-0.0213Yes
176Cyb5r312230-0.753-0.0057Yes
177Pdhx12417-1.0880.0020Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION