| Dataset | Mast.Mast_Pheno.cls #Group2_versus_Group3.Mast_Pheno.cls #Group2_versus_Group3_repos |
| Phenotype | Mast_Pheno.cls#Group2_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.20534511 |
| Normalized Enrichment Score (NES) | -0.92457384 |
| Nominal p-value | 0.6530612 |
| FDR q-value | 1.0 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Pgr | 111 | 0.780 | 0.0183 | No |
| 2 | Papss2 | 212 | 0.700 | 0.0346 | No |
| 3 | Rabep1 | 262 | 0.675 | 0.0543 | No |
| 4 | Homer2 | 377 | 0.618 | 0.0666 | No |
| 5 | Idh2 | 557 | 0.556 | 0.0715 | No |
| 6 | Jak1 | 848 | 0.480 | 0.0648 | No |
| 7 | Il17rb | 903 | 0.469 | 0.0769 | No |
| 8 | Large1 | 1242 | 0.409 | 0.0638 | No |
| 9 | Isg20 | 1410 | 0.386 | 0.0637 | No |
| 10 | Tob1 | 1455 | 0.378 | 0.0734 | No |
| 11 | Aff1 | 1609 | 0.357 | 0.0734 | No |
| 12 | Cish | 1676 | 0.346 | 0.0802 | No |
| 13 | Anxa9 | 2055 | 0.298 | 0.0600 | No |
| 14 | Slc24a3 | 2057 | 0.298 | 0.0703 | No |
| 15 | Tspan13 | 2149 | 0.288 | 0.0730 | No |
| 16 | Abca3 | 2176 | 0.285 | 0.0808 | No |
| 17 | Batf | 2340 | 0.271 | 0.0771 | No |
| 18 | Btg3 | 2353 | 0.270 | 0.0856 | No |
| 19 | Gins2 | 2414 | 0.265 | 0.0900 | No |
| 20 | Kif20a | 2513 | 0.256 | 0.0910 | No |
| 21 | Tiam1 | 2644 | 0.242 | 0.0889 | No |
| 22 | Cd44 | 2659 | 0.239 | 0.0961 | No |
| 23 | Chpt1 | 2799 | 0.226 | 0.0928 | No |
| 24 | Id2 | 2812 | 0.225 | 0.0997 | No |
| 25 | Plk4 | 2858 | 0.220 | 0.1037 | No |
| 26 | Fdft1 | 2892 | 0.216 | 0.1086 | No |
| 27 | Flnb | 2900 | 0.216 | 0.1156 | No |
| 28 | Elovl5 | 2949 | 0.211 | 0.1190 | No |
| 29 | Ptger3 | 2972 | 0.210 | 0.1246 | No |
| 30 | Ncor2 | 3079 | 0.199 | 0.1230 | No |
| 31 | Cacna2d2 | 3130 | 0.196 | 0.1257 | No |
| 32 | Fos | 3188 | 0.190 | 0.1278 | No |
| 33 | Sgk1 | 3378 | 0.176 | 0.1186 | No |
| 34 | Dnajc1 | 3704 | 0.150 | 0.0975 | No |
| 35 | Rbbp8 | 3749 | 0.146 | 0.0990 | No |
| 36 | Ugdh | 3770 | 0.144 | 0.1025 | No |
| 37 | Slc7a5 | 3799 | 0.143 | 0.1052 | No |
| 38 | Slc29a1 | 3898 | 0.135 | 0.1020 | No |
| 39 | Opn3 | 4068 | 0.121 | 0.0925 | No |
| 40 | Unc13b | 4197 | 0.112 | 0.0860 | No |
| 41 | Slc16a1 | 4235 | 0.109 | 0.0869 | No |
| 42 | Fkbp5 | 4492 | 0.087 | 0.0692 | No |
| 43 | Cd9 | 4511 | 0.086 | 0.0707 | No |
| 44 | Gfus | 4554 | 0.082 | 0.0702 | No |
| 45 | Bag1 | 4614 | 0.078 | 0.0681 | No |
| 46 | Rab31 | 4875 | 0.062 | 0.0492 | No |
| 47 | Cdh1 | 5412 | 0.027 | 0.0067 | No |
| 48 | Abhd2 | 5545 | 0.018 | -0.0034 | No |
| 49 | Impa2 | 5648 | 0.011 | -0.0113 | No |
| 50 | Tmprss3 | 5795 | 0.002 | -0.0230 | No |
| 51 | Dnajc12 | 5797 | 0.002 | -0.0231 | No |
| 52 | S100a9 | 5826 | 0.000 | -0.0253 | No |
| 53 | Nab2 | 5868 | -0.003 | -0.0286 | No |
| 54 | Jak2 | 5940 | -0.007 | -0.0341 | No |
| 55 | Mettl3 | 5978 | -0.011 | -0.0367 | No |
| 56 | Mocs2 | 6263 | -0.030 | -0.0586 | No |
| 57 | Xrcc3 | 7010 | -0.083 | -0.1162 | No |
| 58 | Aldh3a2 | 7031 | -0.085 | -0.1149 | No |
| 59 | Dhcr7 | 7242 | -0.099 | -0.1284 | No |
| 60 | Pdcd4 | 7447 | -0.113 | -0.1410 | No |
| 61 | Cox6c | 7498 | -0.116 | -0.1410 | No |
| 62 | Gla | 7686 | -0.129 | -0.1516 | No |
| 63 | Dusp2 | 7828 | -0.140 | -0.1582 | No |
| 64 | Dynlt3 | 8075 | -0.158 | -0.1726 | No |
| 65 | Top2a | 8076 | -0.158 | -0.1671 | No |
| 66 | Pkp3 | 8214 | -0.167 | -0.1723 | No |
| 67 | Bcl2 | 8226 | -0.168 | -0.1674 | No |
| 68 | Fabp5 | 8271 | -0.171 | -0.1649 | No |
| 69 | Gale | 8272 | -0.171 | -0.1590 | No |
| 70 | Hmgcs2 | 8492 | -0.185 | -0.1703 | No |
| 71 | Ppif | 8497 | -0.185 | -0.1641 | No |
| 72 | Stil | 8499 | -0.185 | -0.1577 | No |
| 73 | Tjp3 | 8628 | -0.195 | -0.1613 | No |
| 74 | Igfbp4 | 8737 | -0.204 | -0.1629 | No |
| 75 | Il6st | 9033 | -0.227 | -0.1789 | No |
| 76 | Car2 | 9162 | -0.237 | -0.1809 | No |
| 77 | Nxt1 | 9464 | -0.261 | -0.1962 | Yes |
| 78 | Prkar2b | 9526 | -0.266 | -0.1918 | Yes |
| 79 | Etfb | 9648 | -0.276 | -0.1920 | Yes |
| 80 | Cdc6 | 9739 | -0.284 | -0.1894 | Yes |
| 81 | Rnaseh2a | 9743 | -0.284 | -0.1797 | Yes |
| 82 | Ptpn6 | 9802 | -0.289 | -0.1743 | Yes |
| 83 | Blvrb | 9853 | -0.294 | -0.1681 | Yes |
| 84 | Atp2b4 | 9917 | -0.301 | -0.1627 | Yes |
| 85 | Itpk1 | 9961 | -0.305 | -0.1555 | Yes |
| 86 | Add3 | 10017 | -0.310 | -0.1491 | Yes |
| 87 | Arl3 | 10151 | -0.323 | -0.1486 | Yes |
| 88 | Siah2 | 10283 | -0.337 | -0.1474 | Yes |
| 89 | Snx10 | 10466 | -0.357 | -0.1497 | Yes |
| 90 | Fkbp4 | 10740 | -0.387 | -0.1583 | Yes |
| 91 | Cdc20 | 10779 | -0.392 | -0.1477 | Yes |
| 92 | Xbp1 | 10825 | -0.398 | -0.1374 | Yes |
| 93 | Hspa4l | 10972 | -0.418 | -0.1346 | Yes |
| 94 | Rps6ka2 | 11053 | -0.427 | -0.1262 | Yes |
| 95 | Dcxr | 11387 | -0.475 | -0.1366 | Yes |
| 96 | Sord | 11416 | -0.479 | -0.1221 | Yes |
| 97 | Slc26a2 | 11424 | -0.481 | -0.1058 | Yes |
| 98 | Kcnk5 | 11437 | -0.483 | -0.0899 | Yes |
| 99 | Plaat3 | 11577 | -0.507 | -0.0835 | Yes |
| 100 | Myb | 11597 | -0.513 | -0.0671 | Yes |
| 101 | Slc22a5 | 11879 | -0.587 | -0.0693 | Yes |
| 102 | Scarb1 | 11894 | -0.590 | -0.0499 | Yes |
| 103 | Ass1 | 11900 | -0.592 | -0.0296 | Yes |
| 104 | Nrip1 | 12093 | -0.668 | -0.0218 | Yes |
| 105 | Amfr | 12169 | -0.707 | -0.0032 | Yes |
| 106 | Llgl2 | 12182 | -0.719 | 0.0210 | Yes |

