Details for gene set HALLMARK_EPITHELIAL_MESENCHYMAL

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group2_versus_Group3.Mast_Pheno.cls #Group2_versus_Group3_repos
Phenotype	Mast_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	1
GeneSet	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION
Enrichment Score (ES)	0.27353248
Normalized Enrichment Score (NES)	1.028808
Nominal p-value	0.43548387
FDR q-value	0.8399985
FWER p-Value	0.998

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Mcm7	129	0.758	0.0285	Yes
2	Tnfaip3	184	0.717	0.0609	Yes
3	Sntb1	246	0.683	0.0910	Yes
4	Il6	428	0.598	0.1071	Yes
5	Jun	441	0.595	0.1367	Yes
6	Basp1	761	0.504	0.1367	Yes
7	Serpine2	788	0.496	0.1600	Yes
8	Tpm4	837	0.484	0.1810	Yes
9	Pmepa1	940	0.462	0.1965	Yes
10	Col5a1	941	0.462	0.2202	Yes
11	Gpc1	1028	0.445	0.2361	Yes
12	Gja1	1182	0.421	0.2453	Yes
13	Qsox1	1450	0.379	0.2432	Yes
14	Itgav	1628	0.354	0.2470	Yes
15	Fbn1	1680	0.345	0.2606	Yes
16	Vcan	1822	0.325	0.2659	Yes
17	Pdgfrb	1927	0.313	0.2735	Yes
18	Dst	2389	0.267	0.2500	No
19	Vegfa	2420	0.264	0.2611	No
20	Cd44	2659	0.239	0.2541	No
21	Plod1	2697	0.237	0.2633	No
22	Id2	2812	0.225	0.2656	No
23	Vegfc	2925	0.213	0.2675	No
24	Sat1	3013	0.206	0.2711	No
25	Thbs1	3344	0.178	0.2535	No
26	Sfrp4	3467	0.167	0.2522	No
27	Plod3	3487	0.167	0.2593	No
28	Ppib	4111	0.118	0.2149	No
29	Pvr	4261	0.108	0.2084	No
30	Lamc1	4476	0.089	0.1957	No
31	Capg	4483	0.088	0.1998	No
32	Rhob	4562	0.081	0.1976	No
33	Plaur	4723	0.072	0.1884	No
34	Wipf1	4787	0.068	0.1868	No
35	Tpm1	5292	0.035	0.1479	No
36	Vim	5330	0.031	0.1465	No
37	Notch2	5535	0.018	0.1309	No
38	Ecm2	5834	-0.000	0.1069	No
39	Itgb3	6373	-0.037	0.0653	No
40	Ecm1	6460	-0.044	0.0606	No
41	Itgb1	6536	-0.050	0.0571	No
42	Copa	6728	-0.063	0.0449	No
43	Colgalt1	6838	-0.071	0.0397	No
44	Fap	7080	-0.089	0.0249	No
45	Sgcb	7259	-0.100	0.0156	No
46	Glipr1	7377	-0.108	0.0117	No
47	Gadd45a	7411	-0.111	0.0147	No
48	Calu	7456	-0.114	0.0170	No
49	Fuca1	8085	-0.158	-0.0257	No
50	Bmp1	8090	-0.159	-0.0178	No
51	Ntm	8174	-0.164	-0.0161	No
52	Itga5	8185	-0.165	-0.0085	No
53	Igfbp4	8737	-0.204	-0.0426	No
54	Cap2	8896	-0.216	-0.0443	No
55	Gem	9281	-0.246	-0.0627	No
56	Flna	9362	-0.254	-0.0561	No
57	Lgals1	9907	-0.300	-0.0847	No
58	Tgm2	10242	-0.333	-0.0946	No
59	Cald1	10295	-0.339	-0.0814	No
60	Timp3	10712	-0.385	-0.0953	No
61	Emp3	10719	-0.386	-0.0760	No
62	Plod2	10744	-0.388	-0.0580	No
63	Tgfb1	10813	-0.397	-0.0431	No
64	Il15	11576	-0.506	-0.0787	No
65	Mmp2	11593	-0.512	-0.0538	No
66	Tgfbr3	11719	-0.543	-0.0360	No
67	P3h1	11798	-0.562	-0.0135	No
68	Mmp14	12023	-0.634	0.0009	No
69	Itga2	12034	-0.638	0.0329	No