Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group2_versus_Group3.Mast_Pheno.cls #Group2_versus_Group3_repos
Phenotype	Mast_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.23270425
Normalized Enrichment Score (NES)	-0.97166467
Nominal p-value	0.4969697
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Fdx1	38	0.934	0.0248	No
2	Adam9	105	0.786	0.0429	No
3	Gnai3	121	0.767	0.0646	No
4	Tnfaip3	184	0.717	0.0810	No
5	Raf1	200	0.708	0.1009	No
6	Gzmb	209	0.703	0.1213	No
7	Lcp2	280	0.661	0.1353	No
8	Il6	428	0.598	0.1413	No
9	Gmfb	481	0.583	0.1545	No
10	Dyrk2	554	0.557	0.1653	No
11	Ctsb	706	0.516	0.1684	No
12	Pdp1	805	0.492	0.1752	No
13	Ctsc	1003	0.450	0.1726	No
14	Cdh13	1019	0.448	0.1848	No
15	Dgkg	1156	0.424	0.1864	No
16	Vcpip1	1352	0.393	0.1823	No
17	Gng2	1519	0.368	0.1799	No
18	Lap3	1582	0.360	0.1856	No
19	Xpnpep1	1788	0.330	0.1788	No
20	Usp16	1944	0.312	0.1755	No
21	Lta4h	2271	0.277	0.1573	No
22	Dock4	2315	0.273	0.1620	No
23	Cdk5r1	2428	0.264	0.1608	No
24	Hspa5	2868	0.219	0.1318	No
25	Pik3ca	2891	0.216	0.1364	No
26	Rasgrp1	2897	0.216	0.1425	No
27	Ppp4c	2936	0.212	0.1457	No
28	Kcnip3	2998	0.207	0.1470	No
29	Lamp2	3486	0.167	0.1124	No
30	Rnf4	3907	0.134	0.0823	No
31	Lipa	4469	0.090	0.0395	No
32	Fcer1g	4546	0.083	0.0358	No
33	Brpf3	4553	0.082	0.0378	No
34	Sirt6	4603	0.079	0.0362	No
35	Spock2	4631	0.077	0.0363	No
36	Psen1	4688	0.074	0.0339	No
37	Plaur	4723	0.072	0.0333	No
38	Irf2	4777	0.069	0.0311	No
39	Pla2g4a	4980	0.055	0.0163	No
40	Dock9	5040	0.051	0.0131	No
41	Kif2a	5095	0.047	0.0101	No
42	Cblb	5261	0.036	-0.0022	No
43	Usp15	5316	0.033	-0.0056	No
44	Gnb4	5425	0.026	-0.0136	No
45	Casp1	5429	0.025	-0.0131	No
46	Usp8	5442	0.024	-0.0134	No
47	Kcnip2	5493	0.021	-0.0168	No
48	Rce1	5500	0.021	-0.0167	No
49	C3	5756	0.004	-0.0372	No
50	S100a9	5826	0.000	-0.0428	No
51	Sh2b3	5892	-0.004	-0.0480	No
52	Pik3r5	5916	-0.006	-0.0497	No
53	Jak2	5940	-0.007	-0.0513	No
54	Rbsn	5942	-0.007	-0.0512	No
55	Calm3	5944	-0.008	-0.0510	No
56	Casp7	5950	-0.008	-0.0512	No
57	Plek	6172	-0.024	-0.0684	No
58	Irf1	6343	-0.035	-0.0812	No
59	Casp3	6556	-0.051	-0.0968	No
60	Pik3cg	6678	-0.059	-0.1049	No
61	Prkcd	7195	-0.097	-0.1439	No
62	Was	7222	-0.098	-0.1430	No
63	Akap10	7265	-0.100	-0.1435	No
64	Ehd1	7357	-0.107	-0.1476	No
65	Pim1	7415	-0.111	-0.1489	No
66	Calm1	7444	-0.113	-0.1479	No
67	Prcp	8155	-0.163	-0.2006	No
68	Gca	8165	-0.164	-0.1964	No
69	S100a13	8211	-0.167	-0.1951	No
70	Anxa5	8303	-0.173	-0.1973	No
71	Grb2	8595	-0.192	-0.2152	No
72	Gnai2	8812	-0.210	-0.2264	Yes
73	Prep	8818	-0.211	-0.2205	Yes
74	Prdm4	8831	-0.212	-0.2152	Yes
75	Phex	8841	-0.212	-0.2096	Yes
76	Gngt2	8901	-0.216	-0.2079	Yes
77	Psmb9	8926	-0.219	-0.2033	Yes
78	Atox1	8987	-0.224	-0.2015	Yes
79	Dusp5	9144	-0.236	-0.2071	Yes
80	Car2	9162	-0.237	-0.2014	Yes
81	Serpinc1	9364	-0.254	-0.2101	Yes
82	Zeb1	9435	-0.260	-0.2081	Yes
83	Gnb2	9523	-0.266	-0.2072	Yes
84	Ctsl	9543	-0.268	-0.2007	Yes
85	Dock10	9798	-0.289	-0.2127	Yes
86	Ppp2cb	9799	-0.289	-0.2041	Yes
87	Dpp4	9895	-0.298	-0.2029	Yes
88	Itgam	10001	-0.309	-0.2022	Yes
89	Rabif	10033	-0.312	-0.1954	Yes
90	Ctso	10101	-0.318	-0.1913	Yes
91	Lyn	10352	-0.345	-0.2013	Yes
92	Lgals3	10520	-0.363	-0.2040	Yes
93	Stx4a	10619	-0.375	-0.2008	Yes
94	Cr2	10673	-0.380	-0.1937	Yes
95	Rhog	10730	-0.387	-0.1867	Yes
96	F8	10733	-0.387	-0.1753	Yes
97	Dusp6	10836	-0.400	-0.1716	Yes
98	Plscr1	10850	-0.401	-0.1607	Yes
99	Irf7	10878	-0.406	-0.1508	Yes
100	Cd46	10883	-0.406	-0.1390	Yes
101	Ctsd	10893	-0.408	-0.1275	Yes
102	C2	11044	-0.426	-0.1270	Yes
103	Gp1ba	11203	-0.448	-0.1264	Yes
104	Csrp1	11339	-0.468	-0.1234	Yes
105	Casp9	11342	-0.469	-0.1095	Yes
106	Src	11359	-0.471	-0.0968	Yes
107	Casp4	11690	-0.534	-0.1076	Yes
108	Pfn1	11707	-0.539	-0.0928	Yes
109	Timp2	11769	-0.554	-0.0812	Yes
110	Gpd2	11825	-0.570	-0.0686	Yes
111	Usp14	11841	-0.574	-0.0527	Yes
112	Fyn	11883	-0.588	-0.0384	Yes
113	Mmp14	12023	-0.634	-0.0308	Yes
114	Msrb1	12057	-0.648	-0.0141	Yes
115	Gata3	12166	-0.705	-0.0018	Yes
116	Cpq	12288	-0.805	0.0124	Yes