Details for gene set HALLMARK_REACTIVE_OXYGEN_SPECIES

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group4.Mast_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)	-0.40598777
Normalized Enrichment Score (NES)	-1.4689016
Nominal p-value	0.02255639
FDR q-value	0.13531366
FWER p-Value	0.356

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Txnrd2	443	0.586	0.0157	No
2	Prdx6	1437	0.367	-0.0322	No
3	Sod1	1771	0.325	-0.0305	No
4	Txn1	2850	0.216	-0.0985	No
5	Stk25	2874	0.213	-0.0817	No
6	Gsr	3153	0.187	-0.0876	No
7	Cat	3259	0.180	-0.0803	No
8	Ndufa6	3926	0.127	-0.1228	No
9	Gclc	4056	0.117	-0.1229	No
10	Pfkp	4059	0.117	-0.1128	No
11	Oxsr1	4168	0.112	-0.1117	No
12	Egln2	4350	0.097	-0.1177	No
13	Ercc2	4369	0.096	-0.1108	No
14	Txnrd1	4381	0.095	-0.1033	No
15	Ptpa	5442	0.020	-0.1871	No
16	Mbp	5724	0.001	-0.2096	No
17	Gpx4	5921	-0.010	-0.2245	No
18	Msra	6022	-0.016	-0.2312	No
19	Atox1	6041	-0.016	-0.2312	No
20	Scaf4	6081	-0.019	-0.2327	No
21	Cdkn2d	6175	-0.025	-0.2380	No
22	Abcc1	6325	-0.035	-0.2469	No
23	Hhex	7108	-0.084	-0.3026	No
24	Prnp	7659	-0.121	-0.3364	No
25	Sbno2	7800	-0.131	-0.3361	No
26	Ipcef1	8154	-0.155	-0.3510	No
27	Mpo	8299	-0.165	-0.3481	No
28	Prdx4	8301	-0.165	-0.3337	No
29	Lamtor5	8389	-0.171	-0.3257	No
30	Junb	8623	-0.188	-0.3280	No
31	Lsp1	9020	-0.217	-0.3408	No
32	Pdlim1	9829	-0.284	-0.3810	Yes
33	G6pdx	10095	-0.307	-0.3754	Yes
34	Fes	10407	-0.337	-0.3709	Yes
35	Selenos	10556	-0.354	-0.3518	Yes
36	Nqo1	10565	-0.355	-0.3212	Yes
37	Ndufs2	10790	-0.383	-0.3057	Yes
38	Glrx2	10957	-0.404	-0.2836	Yes
39	Prdx2	11321	-0.460	-0.2725	Yes
40	Hmox2	11488	-0.490	-0.2428	Yes
41	Gclm	11674	-0.528	-0.2114	Yes
42	Sod2	11907	-0.595	-0.1778	Yes
43	Ftl1	12045	-0.638	-0.1328	Yes
44	Prdx1	12266	-0.779	-0.0821	Yes
45	Glrx	12417	-1.095	0.0019	Yes