Details for gene set HALLMARK_P53

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group4.Mast_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_P53_PATHWAY
Enrichment Score (ES)	-0.23419844
Normalized Enrichment Score (NES)	-1.117942
Nominal p-value	0.20247933
FDR q-value	0.6122896
FWER p-Value	0.988

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Fos	60	0.871	0.0152	No
2	App	72	0.844	0.0337	No
3	Btg1	109	0.790	0.0489	No
4	Jun	176	0.726	0.0602	No
5	Vwa5a	215	0.689	0.0730	No
6	Mxd1	235	0.674	0.0869	No
7	Vdr	264	0.664	0.0999	No
8	Sat1	396	0.601	0.1031	No
9	Pidd1	647	0.519	0.0947	No
10	Iscu	894	0.460	0.0853	No
11	Notch1	1066	0.430	0.0813	No
12	H2ac25	1196	0.401	0.0800	No
13	Mxd4	1245	0.393	0.0851	No
14	Ninj1	1275	0.389	0.0917	No
15	Tax1bp3	1276	0.389	0.1006	No
16	Cgrrf1	1384	0.373	0.1005	No
17	Trafd1	1457	0.364	0.1030	No
18	Ppp1r15a	1471	0.361	0.1103	No
19	Dcxr	1561	0.348	0.1110	No
20	Rb1	1625	0.339	0.1137	No
21	Fbxw7	1679	0.334	0.1171	No
22	Ctsd	1688	0.333	0.1241	No
23	Coq8a	1744	0.327	0.1271	No
24	Rhbdf2	1893	0.310	0.1222	No
25	Ei24	2048	0.294	0.1165	No
26	Zmat3	2057	0.292	0.1225	No
27	Cdk5r1	2283	0.271	0.1105	No
28	Abat	2287	0.270	0.1164	No
29	Zbtb16	2306	0.268	0.1211	No
30	Ercc5	2334	0.266	0.1251	No
31	Pvt1	2359	0.263	0.1291	No
32	Cd82	2440	0.254	0.1285	No
33	Slc19a2	2515	0.248	0.1282	No
34	Wrap73	2570	0.243	0.1294	No
35	Elp1	2640	0.236	0.1292	No
36	Pom121	2766	0.223	0.1241	No
37	Tob1	2864	0.214	0.1212	No
38	Ankra2	3015	0.200	0.1136	No
39	Zfp36l1	3060	0.195	0.1145	No
40	Itgb4	3076	0.194	0.1177	No
41	Ada	3080	0.194	0.1219	No
42	Plk3	3111	0.191	0.1239	No
43	Acvr1b	3155	0.187	0.1247	No
44	Pcna	3281	0.179	0.1186	No
45	Stom	3408	0.168	0.1122	No
46	Dram1	3497	0.162	0.1088	No
47	Trp53	3510	0.161	0.1115	No
48	Abcc5	3550	0.158	0.1120	No
49	Ccp110	3738	0.142	0.1001	No
50	Ccnd2	3800	0.138	0.0983	No
51	Aen	3843	0.134	0.0979	No
52	Ccng1	3873	0.132	0.0986	No
53	Rrp8	3874	0.132	0.1016	No
54	Sp1	3912	0.128	0.1016	No
55	Foxo3	4001	0.122	0.0972	No
56	Ddb2	4020	0.120	0.0985	No
57	Triap1	4213	0.108	0.0854	No
58	Tm7sf3	4312	0.100	0.0797	No
59	Slc3a2	4640	0.076	0.0549	No
60	Tap1	4654	0.075	0.0555	No
61	Rad9a	4688	0.072	0.0545	No
62	Cd81	4917	0.056	0.0372	No
63	Ralgds	4937	0.055	0.0369	No
64	Mdm2	4958	0.054	0.0365	No
65	Rab40c	5009	0.050	0.0336	No
66	Mknk2	5225	0.036	0.0170	No
67	Hexim1	5275	0.032	0.0137	No
68	Pmm1	5338	0.027	0.0093	No
69	Ier5	5434	0.021	0.0020	No
70	Hspa4l	5734	0.001	-0.0223	No
71	Rnf19b	5905	-0.009	-0.0359	No
72	Ctsf	5984	-0.014	-0.0419	No
73	Ptpn14	5986	-0.014	-0.0417	No
74	Cdkn2aip	6004	-0.014	-0.0427	No
75	Polh	6059	-0.018	-0.0467	No
76	Dnttip2	6155	-0.024	-0.0539	No
77	Dgka	6266	-0.031	-0.0621	No
78	Cebpa	6289	-0.033	-0.0632	No
79	Kif13b	6337	-0.036	-0.0662	No
80	Apaf1	6340	-0.036	-0.0655	No
81	Klk8	6420	-0.041	-0.0710	No
82	Abhd4	6431	-0.042	-0.0708	No
83	Cdkn1a	6512	-0.047	-0.0763	No
84	Ppm1d	6680	-0.056	-0.0886	No
85	Ddit4	7365	-0.101	-0.1419	No
86	Txnip	7678	-0.123	-0.1644	No
87	Tsc22d1	7854	-0.134	-0.1756	No
88	Tspyl2	7874	-0.136	-0.1740	No
89	Cyfip2	7920	-0.140	-0.1744	No
90	Xpc	7939	-0.141	-0.1727	No
91	Def6	8001	-0.145	-0.1743	No
92	Mapkapk3	8006	-0.145	-0.1713	No
93	Sec61a1	8145	-0.154	-0.1790	No
94	Hras	8484	-0.177	-0.2024	No
95	Sesn1	8566	-0.184	-0.2047	No
96	Tgfb1	8568	-0.184	-0.2006	No
97	Ier3	8607	-0.187	-0.1994	No
98	Wwp1	8672	-0.191	-0.2002	No
99	Rap2b	8693	-0.193	-0.1974	No
100	Btg2	8841	-0.206	-0.2046	No
101	H1f2	8888	-0.209	-0.2035	No
102	Tgfa	9016	-0.217	-0.2089	No
103	Ip6k2	9072	-0.221	-0.2083	No
104	Pitpnc1	9175	-0.229	-0.2113	No
105	Irag2	9243	-0.234	-0.2114	No
106	Rpl18	9326	-0.241	-0.2125	No
107	Steap3	9511	-0.258	-0.2215	No
108	Ddit3	9533	-0.260	-0.2173	No
109	Fam162a	9570	-0.263	-0.2142	No
110	Baiap2	9657	-0.270	-0.2149	No
111	Rchy1	9819	-0.284	-0.2215	No
112	Rxra	9976	-0.298	-0.2273	Yes
113	Traf4	9977	-0.298	-0.2205	Yes
114	Cdh13	10066	-0.306	-0.2206	Yes
115	Prmt2	10087	-0.307	-0.2151	Yes
116	Tcn2	10243	-0.321	-0.2204	Yes
117	Blcap	10253	-0.322	-0.2137	Yes
118	Retsat	10305	-0.326	-0.2104	Yes
119	H2aj	10419	-0.338	-0.2118	Yes
120	Hint1	10527	-0.352	-0.2124	Yes
121	Csrnp2	10575	-0.356	-0.2080	Yes
122	Slc35d1	10667	-0.368	-0.2070	Yes
123	Prkab1	10672	-0.369	-0.1988	Yes
124	Fuca1	10695	-0.371	-0.1921	Yes
125	Plxnb2	10735	-0.376	-0.1866	Yes
126	Tprkb	10758	-0.378	-0.1797	Yes
127	Rps12	10794	-0.383	-0.1737	Yes
128	Casp1	10864	-0.392	-0.1703	Yes
129	F2r	11013	-0.412	-0.1728	Yes
130	Rack1	11081	-0.420	-0.1686	Yes
131	Ccnk	11236	-0.445	-0.1709	Yes
132	Gm2a	11324	-0.460	-0.1674	Yes
133	Sphk1	11405	-0.476	-0.1630	Yes
134	Osgin1	11520	-0.497	-0.1608	Yes
135	Bax	11650	-0.522	-0.1593	Yes
136	Hdac3	11670	-0.527	-0.1487	Yes
137	Fdxr	11731	-0.540	-0.1412	Yes
138	Ndrg1	11791	-0.558	-0.1332	Yes
139	Nol8	11893	-0.589	-0.1279	Yes
140	Vamp8	11954	-0.610	-0.1187	Yes
141	Ptpre	11999	-0.625	-0.1079	Yes
142	Irak1	12020	-0.630	-0.0950	Yes
143	Ccnd3	12090	-0.661	-0.0854	Yes
144	S100a10	12235	-0.746	-0.0800	Yes
145	Bak1	12247	-0.760	-0.0634	Yes
146	Gadd45a	12321	-0.845	-0.0499	Yes
147	Rpl36	12325	-0.847	-0.0307	Yes
148	Sertad3	12328	-0.850	-0.0113	Yes
149	Rps27l	12355	-0.886	0.0070	Yes