DatasetMast.Mast_Pheno.cls
#Group1_versus_Group4.Mast_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMast_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_MYC_TARGETS_V1
Enrichment Score (ES)-0.3539707
Normalized Enrichment Score (NES)-1.465839
Nominal p-value0.058380414
FDR q-value0.112231
FWER p-Value0.363
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_MYC_TARGETS_V1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Xpo1240.9730.0158No
2Mcm51400.7520.0202No
3Hspd11540.7420.0327No
4Kpnb11630.7370.0455No
5Rrp94540.5810.0324No
6Hnrnpa15340.5550.0361No
7Hnrnpa36850.5110.0332No
8Hnrnpa2b17670.4890.0356No
9Psmd38060.4770.0412No
10Fam120a10020.4420.0333No
11Smarcc111030.4220.0329No
12Eif4g211250.4160.0388No
13Ndufab111370.4130.0454No
14Cul112020.3990.0475No
15Tomm70a12100.3990.0542No
16H2az114130.3690.0445No
17Hnrnpu17160.3300.0259No
18Nop1617500.3260.0291No
19Ncbp118170.3190.0296No
20Srsf118530.3150.0325No
21Rrm119130.3080.0333No
22Mrps18b21450.2830.0196No
23Cdc4521950.2780.0207No
24Psmd722750.2710.0192No
25C1qbp22850.2710.0234No
26Vdac322860.2700.0283No
27Canx23180.2680.0307No
28Ilf223330.2660.0344No
29Ywhae26200.2380.0154No
30Ruvbl228560.2150.0002No
31Aimp229310.207-0.0021No
32Srpk130120.200-0.0049No
33Eif4e31390.189-0.0118No
34Uba231780.185-0.0115No
35Hnrnpr31840.185-0.0085No
36Xpot31900.185-0.0055No
37Syncrip32150.183-0.0042No
38Pcna32810.179-0.0062No
39Sf3b334720.164-0.0187No
40Mcm637100.145-0.0354No
41Eif2s137970.138-0.0399No
42Exosc739100.128-0.0467No
43Pwp139610.124-0.0485No
44Srsf339730.123-0.0471No
45Ppia39890.122-0.0461No
46Ddx2141420.114-0.0565No
47Psmc441500.113-0.0550No
48Cbx343920.094-0.0729No
49Psmc644980.086-0.0799No
50Psmb246270.077-0.0889No
51G3bp146490.075-0.0893No
52Psmd147420.067-0.0955No
53Usp147890.065-0.0981No
54Odc148640.059-0.1031No
55Xrcc650390.049-0.1164No
56Rfc450720.047-0.1181No
57Mcm252050.037-0.1282No
58Cnbp52370.035-0.1301No
59Cdk252540.034-0.1308No
60Cops555510.013-0.1547No
61Hnrnpd55610.013-0.1552No
62Pole356160.009-0.1594No
63Ifrd156780.004-0.1643No
64Eif4a157160.002-0.1673No
65Snrpd157380.001-0.1690No
66Ywhaq5898-0.008-0.1819No
67Nolc15943-0.011-0.1852No
68Snrpa16079-0.019-0.1959No
69Tufm6116-0.021-0.1985No
70Pabpc46154-0.024-0.2010No
71Glo16166-0.024-0.2015No
72Phb26321-0.035-0.2134No
73Slc25a36353-0.037-0.2153No
74Etf16459-0.044-0.2230No
75Psma66523-0.048-0.2273No
76Prpf316560-0.051-0.2293No
77Pa2g46601-0.052-0.2316No
78Ran6620-0.054-0.2321No
79Got26824-0.066-0.2475No
80Rps66927-0.072-0.2545No
81Prps27099-0.083-0.2669No
82Mcm47236-0.093-0.2763No
83Gspt17308-0.097-0.2803No
84Mrpl97318-0.098-0.2793No
85Nhp27328-0.099-0.2782No
86Ube2e17394-0.104-0.2816No
87Ap3s17400-0.104-0.2801No
88Vdac17422-0.105-0.2799No
89Orc27491-0.110-0.2834No
90Nop567579-0.116-0.2884No
91Gnl37617-0.119-0.2893No
92Srsf77630-0.120-0.2881No
93Mrpl237753-0.128-0.2957No
94Rnps17763-0.129-0.2941No
95Mcm77780-0.130-0.2930No
96Pold27848-0.134-0.2960No
97Snrpb27849-0.134-0.2936No
98Tra2b7868-0.136-0.2925No
99Eif2s27919-0.139-0.2941No
100Ddx187955-0.141-0.2944No
101Rpl147972-0.143-0.2931No
102Hddc27995-0.144-0.2922No
103Npm18200-0.158-0.3060No
104Eif3b8286-0.164-0.3099No
105Prdx48301-0.165-0.3080No
106Pabpc18529-0.181-0.3232No
107Pcbp18544-0.182-0.3211No
108Rpl228609-0.187-0.3229No
109Tfdp18659-0.191-0.3234No
110Fbl8730-0.196-0.3255No
111Rsl1d18736-0.196-0.3223No
112Cct28974-0.215-0.3377No
113Snrpd38996-0.216-0.3355No
114Serbp19081-0.222-0.3383No
115Abce19162-0.228-0.3407No
116Rpl189326-0.241-0.3496Yes
117Ssbp19348-0.242-0.3469Yes
118Nap1l19353-0.243-0.3427Yes
119Nme19391-0.247-0.3413Yes
120Cct49436-0.251-0.3403Yes
121Psmd149459-0.253-0.3374Yes
122Cstf29523-0.259-0.3378Yes
123Dhx159578-0.263-0.3374Yes
124Stard79778-0.280-0.3486Yes
125Hspe19785-0.281-0.3439Yes
126Cad9795-0.282-0.3395Yes
127Snrpd29838-0.286-0.3377Yes
128Rps109883-0.290-0.3360Yes
129Mad2l19900-0.291-0.3320Yes
130Trim289903-0.292-0.3268Yes
131Erh10016-0.301-0.3305Yes
132Prdx310059-0.306-0.3283Yes
133Bub310079-0.306-0.3242Yes
134Cdc2010104-0.308-0.3206Yes
135Cox5a10128-0.310-0.3168Yes
136Ppm1g10151-0.312-0.3129Yes
137Lsm210181-0.315-0.3095Yes
138Cct510246-0.321-0.3089Yes
139Cyc110259-0.322-0.3040Yes
140Psma410274-0.323-0.2992Yes
141Psma110285-0.325-0.2941Yes
142Vbp110312-0.327-0.2902Yes
143Psmd810483-0.345-0.2978Yes
144Txnl4a10544-0.353-0.2962Yes
145Tardbp10559-0.354-0.2909Yes
146Pgk110562-0.355-0.2846Yes
147Clns1a10599-0.361-0.2809Yes
148Snrpa10631-0.365-0.2768Yes
149Hdac210705-0.372-0.2759Yes
150Cdk410797-0.384-0.2764Yes
151Psma710912-0.398-0.2784Yes
152Rad23b10952-0.403-0.2742Yes
153Ccna210960-0.404-0.2674Yes
154Eef1b210994-0.408-0.2626Yes
155Hnrnpc11054-0.417-0.2598Yes
156Rack111081-0.420-0.2543Yes
157Dut11165-0.431-0.2532Yes
158Eif3j111223-0.442-0.2498Yes
159Eif4h11247-0.447-0.2435Yes
160Ssb11513-0.494-0.2561Yes
161Hdgf11534-0.500-0.2486Yes
162Snrpg11599-0.513-0.2444Yes
163Sf3a111653-0.522-0.2392Yes
164Rplp011726-0.538-0.2352Yes
165Rpl611780-0.554-0.2294Yes
166Acp111833-0.571-0.2233Yes
167Dek11875-0.584-0.2159Yes
168Tcp111929-0.603-0.2092Yes
169Ldha11956-0.611-0.2002Yes
170Cct711987-0.623-0.1913Yes
171Psma212001-0.626-0.1809Yes
172Psmb312004-0.627-0.1696Yes
173Tyms12018-0.630-0.1591Yes
174Hsp90ab112145-0.694-0.1568Yes
175Srm12167-0.703-0.1456Yes
176Srsf212180-0.711-0.1336Yes
177Myc12227-0.743-0.1238Yes
178Impdh212233-0.746-0.1106Yes
179Cct312242-0.756-0.0974Yes
180Apex112260-0.776-0.0846Yes
181Rps212300-0.816-0.0729Yes
182Ranbp112302-0.818-0.0580Yes
183Ncbp212311-0.825-0.0436Yes
184Eif3d12388-0.961-0.0323Yes
185Rps512389-0.969-0.0145Yes
186Rps312404-1.0240.0030Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_MYC_TARGETS_V1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_MYC_TARGETS_V1: Random ES distribution   
Gene set null distribution of ES for HALLMARK_MYC_TARGETS_V1