| Dataset | Mast.Mast_Pheno.cls #Group1_versus_Group4.Mast_Pheno.cls #Group1_versus_Group4_repos |
| Phenotype | Mast_Pheno.cls#Group1_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.2374003 |
| Normalized Enrichment Score (NES) | -1.061923 |
| Nominal p-value | 0.31791908 |
| FDR q-value | 0.5174602 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Fos | 60 | 0.871 | 0.0266 | No |
| 2 | Cd44 | 134 | 0.761 | 0.0481 | No |
| 3 | Nab2 | 236 | 0.674 | 0.0642 | No |
| 4 | Amfr | 240 | 0.673 | 0.0882 | No |
| 5 | Nxt1 | 346 | 0.625 | 0.1023 | No |
| 6 | Il17rb | 851 | 0.469 | 0.0783 | No |
| 7 | Impa2 | 991 | 0.445 | 0.0831 | No |
| 8 | Idh2 | 1132 | 0.414 | 0.0867 | No |
| 9 | Tmprss3 | 1282 | 0.388 | 0.0886 | No |
| 10 | Rnaseh2a | 1324 | 0.381 | 0.0990 | No |
| 11 | Ncor2 | 1332 | 0.380 | 0.1122 | No |
| 12 | Xbp1 | 1358 | 0.377 | 0.1237 | No |
| 13 | Flnb | 1493 | 0.357 | 0.1258 | No |
| 14 | Dcxr | 1561 | 0.348 | 0.1329 | No |
| 15 | Large1 | 2007 | 0.298 | 0.1076 | No |
| 16 | Add3 | 2217 | 0.276 | 0.1006 | No |
| 17 | Abhd2 | 2579 | 0.242 | 0.0800 | No |
| 18 | Tjp3 | 2700 | 0.231 | 0.0786 | No |
| 19 | Nrip1 | 2805 | 0.220 | 0.0781 | No |
| 20 | Siah2 | 2842 | 0.217 | 0.0830 | No |
| 21 | Tob1 | 2864 | 0.214 | 0.0891 | No |
| 22 | Gins2 | 2870 | 0.214 | 0.0964 | No |
| 23 | Rab31 | 3030 | 0.198 | 0.0906 | No |
| 24 | Aldh3a2 | 3404 | 0.168 | 0.0665 | No |
| 25 | Mettl3 | 3533 | 0.159 | 0.0618 | No |
| 26 | Tspan13 | 3551 | 0.158 | 0.0661 | No |
| 27 | Sord | 3661 | 0.149 | 0.0627 | No |
| 28 | Plaat3 | 3730 | 0.143 | 0.0623 | No |
| 29 | Blvrb | 3788 | 0.139 | 0.0627 | No |
| 30 | Rps6ka2 | 4011 | 0.121 | 0.0491 | No |
| 31 | Bcl2 | 4448 | 0.089 | 0.0170 | No |
| 32 | Fdft1 | 4852 | 0.060 | -0.0135 | No |
| 33 | Cdh1 | 4868 | 0.059 | -0.0126 | No |
| 34 | Slc29a1 | 4938 | 0.055 | -0.0162 | No |
| 35 | Ptpn6 | 4968 | 0.053 | -0.0167 | No |
| 36 | Btg3 | 5106 | 0.045 | -0.0262 | No |
| 37 | Myb | 5201 | 0.037 | -0.0325 | No |
| 38 | Rabep1 | 5326 | 0.028 | -0.0415 | No |
| 39 | Il6st | 5366 | 0.026 | -0.0438 | No |
| 40 | Cd9 | 5385 | 0.024 | -0.0443 | No |
| 41 | Stil | 5519 | 0.016 | -0.0546 | No |
| 42 | Slc16a1 | 5529 | 0.015 | -0.0547 | No |
| 43 | Atp2b4 | 5549 | 0.014 | -0.0558 | No |
| 44 | Pdcd4 | 5618 | 0.009 | -0.0610 | No |
| 45 | Hspa4l | 5734 | 0.001 | -0.0703 | No |
| 46 | S100a9 | 5766 | 0.000 | -0.0728 | No |
| 47 | Aff1 | 5854 | -0.005 | -0.0796 | No |
| 48 | Etfb | 5873 | -0.006 | -0.0809 | No |
| 49 | Slc24a3 | 6043 | -0.016 | -0.0940 | No |
| 50 | Ugdh | 6211 | -0.027 | -0.1065 | No |
| 51 | Dnajc1 | 6481 | -0.045 | -0.1267 | No |
| 52 | Ass1 | 6568 | -0.051 | -0.1319 | No |
| 53 | Cish | 6786 | -0.063 | -0.1472 | No |
| 54 | Igfbp4 | 7034 | -0.079 | -0.1644 | No |
| 55 | Dusp2 | 7192 | -0.090 | -0.1738 | No |
| 56 | Id2 | 7232 | -0.093 | -0.1737 | No |
| 57 | Dnajc12 | 7356 | -0.101 | -0.1800 | No |
| 58 | Slc7a5 | 7805 | -0.131 | -0.2116 | No |
| 59 | Scarb1 | 7859 | -0.135 | -0.2110 | No |
| 60 | Slc22a5 | 8016 | -0.146 | -0.2184 | No |
| 61 | Jak1 | 8065 | -0.149 | -0.2169 | No |
| 62 | Kcnk5 | 8259 | -0.163 | -0.2267 | No |
| 63 | Sgk1 | 8338 | -0.168 | -0.2270 | No |
| 64 | Jak2 | 8460 | -0.176 | -0.2304 | Yes |
| 65 | Cdc6 | 8481 | -0.177 | -0.2257 | Yes |
| 66 | Gfus | 8595 | -0.186 | -0.2281 | Yes |
| 67 | Elovl5 | 8675 | -0.192 | -0.2276 | Yes |
| 68 | Opn3 | 8779 | -0.200 | -0.2287 | Yes |
| 69 | Dhcr7 | 8887 | -0.209 | -0.2299 | Yes |
| 70 | Isg20 | 8902 | -0.210 | -0.2234 | Yes |
| 71 | Car2 | 8999 | -0.216 | -0.2234 | Yes |
| 72 | Hmgcs2 | 9024 | -0.218 | -0.2175 | Yes |
| 73 | Tiam1 | 9033 | -0.218 | -0.2103 | Yes |
| 74 | Mocs2 | 9049 | -0.219 | -0.2036 | Yes |
| 75 | Ppif | 9116 | -0.225 | -0.2008 | Yes |
| 76 | Anxa9 | 9375 | -0.245 | -0.2129 | Yes |
| 77 | Itpk1 | 9652 | -0.270 | -0.2255 | Yes |
| 78 | Bag1 | 9704 | -0.273 | -0.2198 | Yes |
| 79 | Papss2 | 9789 | -0.281 | -0.2165 | Yes |
| 80 | Kif20a | 9805 | -0.283 | -0.2075 | Yes |
| 81 | Fabp5 | 9856 | -0.288 | -0.2012 | Yes |
| 82 | Homer2 | 9895 | -0.291 | -0.1938 | Yes |
| 83 | Top2a | 9959 | -0.297 | -0.1882 | Yes |
| 84 | Cacna2d2 | 9962 | -0.297 | -0.1776 | Yes |
| 85 | Gale | 10028 | -0.303 | -0.1719 | Yes |
| 86 | Cdc20 | 10104 | -0.308 | -0.1669 | Yes |
| 87 | Fkbp4 | 10208 | -0.318 | -0.1638 | Yes |
| 88 | Dynlt3 | 10547 | -0.353 | -0.1785 | Yes |
| 89 | Xrcc3 | 10596 | -0.360 | -0.1694 | Yes |
| 90 | Pgr | 10681 | -0.370 | -0.1628 | Yes |
| 91 | Slc26a2 | 10818 | -0.386 | -0.1599 | Yes |
| 92 | Abca3 | 10920 | -0.398 | -0.1537 | Yes |
| 93 | Unc13b | 10984 | -0.407 | -0.1442 | Yes |
| 94 | Chpt1 | 11010 | -0.411 | -0.1314 | Yes |
| 95 | Rbbp8 | 11014 | -0.412 | -0.1167 | Yes |
| 96 | Batf | 11046 | -0.417 | -0.1042 | Yes |
| 97 | Pkp3 | 11092 | -0.422 | -0.0926 | Yes |
| 98 | Arl3 | 11123 | -0.425 | -0.0797 | Yes |
| 99 | Fkbp5 | 11177 | -0.433 | -0.0684 | Yes |
| 100 | Ptger3 | 11518 | -0.496 | -0.0781 | Yes |
| 101 | Prkar2b | 11600 | -0.513 | -0.0661 | Yes |
| 102 | Snx10 | 11963 | -0.613 | -0.0733 | Yes |
| 103 | Gla | 12047 | -0.639 | -0.0570 | Yes |
| 104 | Plk4 | 12249 | -0.766 | -0.0457 | Yes |
| 105 | Llgl2 | 12258 | -0.776 | -0.0184 | Yes |
| 106 | Cox6c | 12369 | -0.918 | 0.0058 | Yes |

