Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group4.Mast_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.2690589
Normalized Enrichment Score (NES)	-1.2319369
Nominal p-value	0.10095238
FDR q-value	0.35992974
FWER p-Value	0.908

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ssrp1	87	0.823	0.0141	No
2	Taf9	322	0.634	0.0114	No
3	Srsf6	488	0.568	0.0126	No
4	Nt5c3	509	0.562	0.0254	No
5	Gtf2f1	863	0.467	0.0087	No
6	Supt5	980	0.447	0.0107	No
7	Usp11	1006	0.441	0.0200	No
8	Gtf2h1	1089	0.425	0.0243	No
9	Cstf3	1099	0.423	0.0344	No
10	Itpa	1211	0.398	0.0356	No
11	Cant1	1219	0.397	0.0453	No
12	Rrm2b	1241	0.394	0.0537	No
13	Mpg	1244	0.393	0.0637	No
14	Nt5c	1394	0.371	0.0611	No
15	Poll	1416	0.369	0.0688	No
16	Rala	1510	0.355	0.0704	No
17	Rfc5	1516	0.354	0.0791	No
18	Polr2d	1687	0.333	0.0739	No
19	Adrm1	1852	0.315	0.0686	No
20	Polr2a	2072	0.292	0.0583	No
21	Fen1	2177	0.280	0.0571	No
22	Pole4	2260	0.273	0.0574	No
23	Adcy6	2302	0.269	0.0610	No
24	Ercc5	2334	0.266	0.0653	No
25	Eloa	2393	0.258	0.0672	No
26	Sac3d1	2498	0.250	0.0652	No
27	Surf1	2594	0.241	0.0637	No
28	Rpa2	2626	0.238	0.0673	No
29	Ddb1	2758	0.224	0.0624	No
30	Pom121	2766	0.223	0.0675	No
31	Nelfb	2794	0.221	0.0710	No
32	Clp1	2911	0.210	0.0670	No
33	Ada	3080	0.194	0.0583	No
34	Pcna	3281	0.179	0.0466	No
35	Dgcr8	3309	0.178	0.0490	No
36	Taf6	3373	0.171	0.0483	No
37	Trp53	3510	0.161	0.0414	No
38	Npr2	3518	0.160	0.0449	No
39	Polr2j	3559	0.157	0.0457	No
40	Ak3	3706	0.145	0.0376	No
41	Lig1	3718	0.144	0.0404	No
42	Brf2	3745	0.142	0.0419	No
43	Nme4	3967	0.124	0.0271	No
44	Polr2k	3992	0.122	0.0283	No
45	Ddb2	4020	0.120	0.0292	No
46	Polr3c	4201	0.109	0.0174	No
47	Ercc2	4369	0.096	0.0063	No
48	Polr2c	4383	0.095	0.0076	No
49	Taf10	4579	0.080	-0.0061	No
50	Dctn4	4606	0.079	-0.0062	No
51	Polr1c	4665	0.074	-0.0090	No
52	Bcap31	4687	0.072	-0.0089	No
53	Cetn2	4845	0.061	-0.0201	No
54	Taf12	5017	0.050	-0.0327	No
55	Rae1	5023	0.050	-0.0319	No
56	Ell	5025	0.050	-0.0307	No
57	Rfc4	5072	0.047	-0.0332	No
58	Nelfcd	5301	0.030	-0.0510	No
59	Gtf2b	5554	0.013	-0.0711	No
60	Polr3gl	5799	-0.001	-0.0909	No
61	Gpx4	5921	-0.010	-0.1005	No
62	Taf1c	5947	-0.011	-0.1022	No
63	Gtf2h3	6029	-0.016	-0.1084	No
64	Polh	6059	-0.018	-0.1103	No
65	Pold4	6277	-0.032	-0.1271	No
66	Cmpk2	6356	-0.037	-0.1325	No
67	Ercc4	6382	-0.039	-0.1335	No
68	Polb	6915	-0.072	-0.1750	No
69	Zwint	6925	-0.072	-0.1738	No
70	Pola1	7267	-0.095	-0.1991	No
71	Hcls1	7332	-0.099	-0.2018	No
72	Ercc3	7447	-0.107	-0.2083	No
73	Sf3a3	7607	-0.118	-0.2182	No
74	Gmpr2	7608	-0.118	-0.2151	No
75	Rfc3	7662	-0.121	-0.2163	No
76	Gsdme	7679	-0.123	-0.2145	No
77	Pola2	7744	-0.127	-0.2164	No
78	Umps	7862	-0.135	-0.2224	No
79	Xpc	7939	-0.141	-0.2250	No
80	Cox17	7951	-0.141	-0.2223	No
81	Polr1d	8062	-0.149	-0.2274	No
82	Upf3b	8093	-0.151	-0.2259	No
83	Nfx1	8136	-0.153	-0.2254	No
84	Sec61a1	8145	-0.154	-0.2221	No
85	Vps37b	8155	-0.155	-0.2188	No
86	Pnp	8232	-0.161	-0.2209	No
87	Dguok	8278	-0.164	-0.2203	No
88	Gtf2h5	8512	-0.179	-0.2347	No
89	Gtf3c5	8559	-0.183	-0.2337	No
90	Prim1	8838	-0.205	-0.2510	No
91	Tk2	8886	-0.209	-0.2495	No
92	Tarbp2	8890	-0.209	-0.2443	No
93	Zfp707	8973	-0.215	-0.2455	No
94	Polr2h	9264	-0.235	-0.2630	Yes
95	Rad51	9276	-0.236	-0.2578	Yes
96	Polr1h	9306	-0.239	-0.2540	Yes
97	Ercc8	9334	-0.242	-0.2500	Yes
98	Nme1	9391	-0.247	-0.2482	Yes
99	Smad5	9408	-0.248	-0.2432	Yes
100	Dad1	9415	-0.248	-0.2373	Yes
101	Polr2i	9484	-0.256	-0.2362	Yes
102	Sdcbp	9508	-0.258	-0.2315	Yes
103	Stx3	9562	-0.262	-0.2290	Yes
104	Nelfe	9679	-0.272	-0.2315	Yes
105	Nudt21	9825	-0.284	-0.2360	Yes
106	Nudt9	9911	-0.292	-0.2354	Yes
107	Pde4b	9941	-0.295	-0.2301	Yes
108	Guk1	10089	-0.307	-0.2342	Yes
109	Ercc1	10135	-0.311	-0.2298	Yes
110	Alyref	10204	-0.317	-0.2272	Yes
111	Polr2f	10487	-0.346	-0.2413	Yes
112	Rev3l	10617	-0.363	-0.2424	Yes
113	Ago4	10647	-0.366	-0.2354	Yes
114	Polr2e	10858	-0.392	-0.2424	Yes
115	Pold3	10895	-0.396	-0.2351	Yes
116	Rbx1	10897	-0.396	-0.2250	Yes
117	Supt4a	10919	-0.398	-0.2165	Yes
118	Rad52	10977	-0.406	-0.2107	Yes
119	Pold1	11131	-0.426	-0.2122	Yes
120	Dut	11165	-0.431	-0.2038	Yes
121	Edf1	11178	-0.433	-0.1936	Yes
122	Mrpl40	11482	-0.489	-0.2057	Yes
123	Arl6ip1	11565	-0.506	-0.1993	Yes
124	Gtf2a2	11609	-0.514	-0.1896	Yes
125	Aaas	11617	-0.515	-0.1770	Yes
126	Polr2g	11619	-0.515	-0.1638	Yes
127	Eif1b	11634	-0.519	-0.1516	Yes
128	Taf13	11642	-0.521	-0.1388	Yes
129	Aprt	11684	-0.530	-0.1285	Yes
130	Vps28	11732	-0.540	-0.1184	Yes
131	Snapc4	11763	-0.549	-0.1068	Yes
132	Snapc5	11900	-0.591	-0.1027	Yes
133	Tyms	12018	-0.630	-0.0960	Yes
134	Rpa3	12036	-0.634	-0.0811	Yes
135	Rfc2	12110	-0.668	-0.0698	Yes
136	Rnmt	12172	-0.706	-0.0566	Yes
137	Mpc2	12212	-0.729	-0.0411	Yes
138	Tsg101	12223	-0.742	-0.0228	Yes
139	Impdh2	12233	-0.746	-0.0044	Yes
140	Ncbp2	12311	-0.825	0.0106	Yes