Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group4.Mast_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.22129808
Normalized Enrichment Score (NES)	-0.9988381
Nominal p-value	0.43204868
FDR q-value	0.6015
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Prkcd	141	0.752	0.0159	No
2	Pik3r5	241	0.672	0.0323	No
3	Gp1ba	243	0.672	0.0567	No
4	Psen1	390	0.603	0.0668	No
5	Kcnip2	571	0.545	0.0720	No
6	Plaur	751	0.493	0.0754	No
7	Gmfb	762	0.491	0.0924	No
8	Casp9	1472	0.361	0.0480	No
9	Rce1	1539	0.351	0.0555	No
10	Usp8	1588	0.346	0.0642	No
11	Brpf3	1605	0.343	0.0753	No
12	Cd46	1612	0.342	0.0873	No
13	Ctsd	1688	0.333	0.0933	No
14	Cpq	1870	0.313	0.0900	No
15	Ctsc	1975	0.301	0.0925	No
16	Cblb	2233	0.274	0.0817	No
17	Cdk5r1	2283	0.271	0.0875	No
18	Hspa5	2544	0.245	0.0754	No
19	Grb2	2654	0.234	0.0750	No
20	Dpp4	2686	0.232	0.0810	No
21	Gngt2	2811	0.220	0.0789	No
22	Lgals3	2989	0.201	0.0718	No
23	Irf1	3052	0.196	0.0739	No
24	Dusp6	3067	0.195	0.0799	No
25	Adam9	3094	0.192	0.0848	No
26	Zeb1	3176	0.186	0.0850	No
27	Irf7	3283	0.179	0.0829	No
28	Fyn	3334	0.176	0.0852	No
29	Rnf4	3423	0.167	0.0841	No
30	S100a13	3441	0.165	0.0887	No
31	Kcnip3	3488	0.163	0.0909	No
32	Akap10	3783	0.139	0.0721	No
33	Lta4h	4822	0.063	-0.0098	No
34	Stx4a	4834	0.062	-0.0084	No
35	Gzmb	4967	0.053	-0.0172	No
36	Timp2	4985	0.052	-0.0167	No
37	Gpd2	5016	0.050	-0.0173	No
38	Usp16	5128	0.043	-0.0248	No
39	Gnai2	5262	0.033	-0.0344	No
40	Tnfaip3	5318	0.028	-0.0378	No
41	Prep	5319	0.028	-0.0368	No
42	Rhog	5383	0.024	-0.0410	No
43	Serpinc1	5637	0.008	-0.0612	No
44	Gnai3	5696	0.003	-0.0658	No
45	Pdp1	5723	0.001	-0.0679	No
46	S100a9	5766	0.000	-0.0713	No
47	Gca	5857	-0.005	-0.0784	No
48	Plscr1	5884	-0.007	-0.0803	No
49	Gng2	5997	-0.014	-0.0889	No
50	Ppp2cb	6000	-0.014	-0.0885	No
51	Atox1	6041	-0.016	-0.0912	No
52	Ctso	6231	-0.028	-0.1055	No
53	Kif2a	6374	-0.038	-0.1156	No
54	Lcp2	6436	-0.042	-0.1190	No
55	Mmp14	6528	-0.048	-0.1246	No
56	Rabif	6532	-0.049	-0.1231	No
57	Usp14	6558	-0.050	-0.1233	No
58	Ppp4c	6583	-0.051	-0.1234	No
59	Lamp2	6615	-0.053	-0.1240	No
60	Plek	6893	-0.070	-0.1439	No
61	Dusp5	6936	-0.073	-0.1447	No
62	Dock9	6955	-0.074	-0.1434	No
63	Itgam	7148	-0.086	-0.1558	No
64	Ehd1	7164	-0.087	-0.1539	No
65	Ctsl	7246	-0.094	-0.1570	No
66	Src	7296	-0.096	-0.1575	No
67	Dock4	7341	-0.100	-0.1575	No
68	Pim1	7409	-0.104	-0.1591	No
69	Rasgrp1	7450	-0.107	-0.1584	No
70	Il6	7463	-0.108	-0.1555	No
71	Usp15	7469	-0.109	-0.1519	No
72	Ctsb	7586	-0.116	-0.1571	No
73	Casp7	7635	-0.120	-0.1567	No
74	Lipa	7875	-0.137	-0.1711	No
75	Fdx1	8123	-0.153	-0.1856	No
76	Fcer1g	8126	-0.153	-0.1801	No
77	Xpnpep1	8156	-0.155	-0.1769	No
78	C3	8158	-0.155	-0.1713	No
79	Vcpip1	8309	-0.166	-0.1774	No
80	Gata3	8347	-0.168	-0.1743	No
81	Msrb1	8363	-0.170	-0.1694	No
82	Jak2	8460	-0.176	-0.1707	No
83	Dyrk2	8548	-0.182	-0.1712	No
84	Gnb2	8735	-0.196	-0.1791	No
85	Raf1	8756	-0.198	-0.1735	No
86	Car2	8999	-0.216	-0.1853	No
87	Pik3cg	9238	-0.233	-0.1961	No
88	C2	9549	-0.261	-0.2118	Yes
89	Gnb4	9573	-0.263	-0.2041	Yes
90	Psmb9	9574	-0.263	-0.1946	Yes
91	Csrp1	9655	-0.270	-0.1913	Yes
92	Pik3ca	9729	-0.276	-0.1872	Yes
93	Casp4	9739	-0.277	-0.1778	Yes
94	Casp3	9773	-0.279	-0.1703	Yes
95	Prdm4	9847	-0.286	-0.1658	Yes
96	Cdh13	10066	-0.306	-0.1724	Yes
97	Lyn	10418	-0.338	-0.1886	Yes
98	Dgkg	10503	-0.348	-0.1827	Yes
99	Cr2	10557	-0.354	-0.1742	Yes
100	Rbsn	10828	-0.388	-0.1820	Yes
101	Spock2	10838	-0.389	-0.1686	Yes
102	Casp1	10864	-0.392	-0.1563	Yes
103	Phex	11027	-0.414	-0.1544	Yes
104	Prcp	11183	-0.433	-0.1512	Yes
105	Irf2	11287	-0.454	-0.1431	Yes
106	Dock10	11480	-0.488	-0.1409	Yes
107	F8	11580	-0.509	-0.1304	Yes
108	Lap3	11685	-0.530	-0.1196	Yes
109	Was	11758	-0.546	-0.1055	Yes
110	Sh2b3	11761	-0.548	-0.0858	Yes
111	Calm1	11779	-0.554	-0.0670	Yes
112	Anxa5	11854	-0.577	-0.0520	Yes
113	Pfn1	11935	-0.606	-0.0365	Yes
114	Pla2g4a	12032	-0.633	-0.0212	Yes
115	Calm3	12123	-0.675	-0.0040	Yes
116	Sirt6	12301	-0.817	0.0114	Yes