Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group4.Mast_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	0
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.24760853
Normalized Enrichment Score (NES)	1.0379311
Nominal p-value	0.37623763
FDR q-value	0.7519304
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Pten	45	0.905	0.0236	Yes
2	Inppl1	105	0.794	0.0427	Yes
3	Evl	172	0.730	0.0593	Yes
4	Layn	213	0.695	0.0770	Yes
5	Vcl	284	0.654	0.0910	Yes
6	Pals1	313	0.639	0.1080	Yes
7	Tsc1	364	0.617	0.1225	Yes
8	Ptk2	382	0.608	0.1394	Yes
9	Vcan	476	0.573	0.1491	Yes
10	Taok2	536	0.554	0.1610	Yes
11	Insig1	568	0.545	0.1749	Yes
12	Pik3cb	779	0.486	0.1725	Yes
13	Nlgn2	780	0.486	0.1871	Yes
14	Gtf2f1	863	0.467	0.1946	Yes
15	Pard6g	867	0.466	0.2084	Yes
16	Mapk14	879	0.463	0.2214	Yes
17	Msn	934	0.456	0.2307	Yes
18	Icam2	1159	0.409	0.2249	Yes
19	Plcg1	1261	0.391	0.2285	Yes
20	Cercam	1349	0.378	0.2328	Yes
21	Nectin2	1438	0.366	0.2367	Yes
22	Pbx2	1585	0.346	0.2353	Yes
23	Sirpa	1637	0.338	0.2413	Yes
24	Nrap	1684	0.334	0.2476	Yes
25	Myh9	2606	0.239	0.1801	No
26	Exoc4	2736	0.227	0.1765	No
27	Mpzl1	2750	0.225	0.1822	No
28	Map3k20	2860	0.214	0.1798	No
29	Tspan4	2964	0.203	0.1776	No
30	Ptprc	3068	0.195	0.1751	No
31	Itgb4	3076	0.194	0.1804	No
32	Adam9	3094	0.192	0.1848	No
33	Vwf	3150	0.188	0.1860	No
34	Map4k2	3276	0.179	0.1812	No
35	Cap1	3354	0.173	0.1802	No
36	B4galt1	3413	0.168	0.1805	No
37	Lima1	3451	0.164	0.1825	No
38	Lamb3	3578	0.155	0.1769	No
39	Wasl	3736	0.143	0.1685	No
40	Tial1	4187	0.110	0.1353	No
41	Itga9	4356	0.097	0.1246	No
42	Icam5	4457	0.089	0.1192	No
43	Ikbkg	4485	0.087	0.1196	No
44	Itgb1	4514	0.085	0.1199	No
45	Sympk	4615	0.078	0.1141	No
46	Icam4	4616	0.078	0.1164	No
47	Stx4a	4834	0.062	0.1007	No
48	Nlgn3	4849	0.061	0.1014	No
49	Cdh1	4868	0.059	0.1017	No
50	Pkd1	4957	0.054	0.0962	No
51	Gnai2	5262	0.033	0.0725	No
52	Nectin1	5292	0.031	0.0711	No
53	Dlg1	5368	0.026	0.0658	No
54	Arpc2	5477	0.019	0.0576	No
55	Cd34	5542	0.014	0.0528	No
56	Ywhah	5573	0.012	0.0507	No
57	Mmp2	5704	0.002	0.0403	No
58	Cdk8	5713	0.002	0.0397	No
59	Fbn1	5753	0.000	0.0365	No
60	Rasa1	5794	-0.001	0.0333	No
61	Akt2	6292	-0.033	-0.0060	No
62	Ctnnd1	6487	-0.045	-0.0204	No
63	Ctnna1	6536	-0.049	-0.0228	No
64	Sgce	6796	-0.064	-0.0419	No
65	Tmem8b	6916	-0.072	-0.0494	No
66	Epb41l2	7269	-0.095	-0.0751	No
67	Src	7296	-0.096	-0.0743	No
68	Akt3	7314	-0.097	-0.0727	No
69	Actn1	7331	-0.099	-0.0711	No
70	Rac2	7441	-0.107	-0.0767	No
71	Amigo2	7490	-0.110	-0.0773	No
72	Rhof	7619	-0.119	-0.0841	No
73	Vav2	7842	-0.134	-0.0980	No
74	Itga2	7975	-0.143	-0.1044	No
75	Pik3r3	8044	-0.148	-0.1055	No
76	Actg1	8399	-0.172	-0.1290	No
77	Arhgef6	8463	-0.176	-0.1288	No
78	Hras	8484	-0.177	-0.1251	No
79	Amigo1	8960	-0.214	-0.1572	No
80	Cadm2	8961	-0.214	-0.1508	No
81	Bmp1	8995	-0.216	-0.1469	No
82	Adam15	9046	-0.219	-0.1444	No
83	Vasp	9114	-0.224	-0.1431	No
84	Nectin4	9355	-0.243	-0.1552	No
85	Icam1	9381	-0.246	-0.1498	No
86	Skap2	9433	-0.251	-0.1464	No
87	Baiap2	9657	-0.270	-0.1564	No
88	Syk	9734	-0.276	-0.1542	No
89	Actn4	9823	-0.284	-0.1528	No
90	Crat	10336	-0.330	-0.1844	No
91	Tjp1	10489	-0.346	-0.1863	No
92	Ldlrap1	10535	-0.352	-0.1794	No
93	Dhx16	10723	-0.375	-0.1833	No
94	Zyx	10766	-0.380	-0.1752	No
95	Cnn2	10803	-0.384	-0.1666	No
96	Myl12b	10915	-0.398	-0.1636	No
97	Shc1	11269	-0.450	-0.1787	No
98	Pecam1	11425	-0.480	-0.1768	No
99	Sorbs3	11440	-0.482	-0.1635	No
100	Jup	11512	-0.494	-0.1543	No
101	Cd86	11541	-0.501	-0.1415	No
102	Itga10	11543	-0.501	-0.1265	No
103	Actb	11679	-0.529	-0.1215	No
104	Cd274	11753	-0.546	-0.1110	No
105	Nf2	11765	-0.549	-0.0954	No
106	Nf1	11819	-0.567	-0.0826	No
107	Rsu1	11906	-0.595	-0.0717	No
108	Tubg1	11911	-0.597	-0.0540	No
109	Pfn1	11935	-0.606	-0.0376	No
110	Atp1a3	12261	-0.776	-0.0406	No
111	Myh10	12286	-0.804	-0.0184	No
112	Hadh	12405	-1.025	0.0029	No