Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group4.Mast_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.2497486
Normalized Enrichment Score (NES)	-1.0822184
Nominal p-value	0.3271605
FDR q-value	0.5703389
FWER p-Value	0.995

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Akt1	38	0.920	0.0256	No
2	Ube2n	189	0.714	0.0357	No
3	Ets1	218	0.688	0.0548	No
4	H2-Oa	317	0.638	0.0668	No
5	Stat1	372	0.614	0.0815	No
6	Il2rg	702	0.507	0.0706	No
7	Map3k7	713	0.503	0.0855	No
8	Il16	1024	0.438	0.0740	No
9	Socs5	1067	0.429	0.0839	No
10	Eif4g3	1068	0.429	0.0973	No
11	Acvr2a	1170	0.407	0.1018	No
12	Prkcb	1321	0.382	0.1015	No
13	Tgfb2	1409	0.370	0.1060	No
14	Il27ra	1615	0.342	0.1000	No
15	Itgb2	1822	0.318	0.0932	No
16	Gpr65	1902	0.309	0.0964	No
17	Itk	1976	0.301	0.0998	No
18	Dyrk3	2001	0.299	0.1072	No
19	Il12rb1	2250	0.274	0.0956	No
20	Tnf	2297	0.269	0.1003	No
21	Ly75	2687	0.232	0.0759	No
22	Ptprc	3068	0.195	0.0512	No
23	Ncf4	3141	0.188	0.0512	No
24	Irf7	3283	0.179	0.0453	No
25	Degs1	3434	0.166	0.0383	No
26	Cd247	3461	0.164	0.0413	No
27	Prf1	3598	0.154	0.0351	No
28	Ube2d1	3603	0.153	0.0395	No
29	Csf1	3748	0.141	0.0323	No
30	Galnt1	3791	0.139	0.0332	No
31	Ccnd2	3800	0.138	0.0368	No
32	Ltb	3839	0.134	0.0379	No
33	Elane	3880	0.131	0.0388	No
34	Bcl3	4332	0.098	0.0052	No
35	Ripk2	4378	0.095	0.0045	No
36	Tap1	4654	0.075	-0.0154	No
37	Capg	4902	0.057	-0.0337	No
38	Irf8	4914	0.056	-0.0329	No
39	Gzmb	4967	0.053	-0.0354	No
40	Ptpn6	4968	0.053	-0.0338	No
41	Mtif2	5030	0.049	-0.0372	No
42	Tlr6	5284	0.031	-0.0568	No
43	Trat1	5313	0.029	-0.0581	No
44	Il15	5381	0.025	-0.0628	No
45	Ccr2	5431	0.021	-0.0661	No
46	Ifngr1	5532	0.015	-0.0738	No
47	Glmn	5657	0.006	-0.0837	No
48	Pf4	5754	0.000	-0.0914	No
49	Eif3a	5896	-0.008	-0.1026	No
50	Brca1	6192	-0.026	-0.1258	No
51	Lcp2	6436	-0.042	-0.1442	No
52	Cd96	6602	-0.052	-0.1559	No
53	Ikbkb	6604	-0.052	-0.1544	No
54	Srgn	6724	-0.059	-0.1622	No
55	Psmb10	6807	-0.065	-0.1668	No
56	Wars1	6993	-0.077	-0.1794	No
57	Flna	7143	-0.086	-0.1888	No
58	Il7	7185	-0.089	-0.1894	No
59	Il18rap	7231	-0.093	-0.1902	No
60	Hcls1	7332	-0.099	-0.1952	No
61	Il4	7363	-0.101	-0.1945	No
62	Elf4	7446	-0.107	-0.1978	No
63	Il6	7463	-0.108	-0.1957	No
64	Cd47	7529	-0.113	-0.1975	No
65	Cd1d2	7713	-0.125	-0.2084	No
66	Ccr1	7818	-0.132	-0.2127	No
67	Tap2	7853	-0.134	-0.2113	No
68	Stat4	8079	-0.150	-0.2249	No
69	H2-DMa	8091	-0.151	-0.2211	No
70	Nck1	8098	-0.152	-0.2168	No
71	Npm1	8200	-0.158	-0.2201	No
72	Jak2	8460	-0.176	-0.2356	No
73	Tgfb1	8568	-0.184	-0.2386	No
74	Igsf6	8612	-0.187	-0.2362	No
75	Ache	8637	-0.189	-0.2323	No
76	Cfp	8648	-0.190	-0.2272	No
77	Prkcg	8671	-0.191	-0.2230	No
78	Hif1a	8713	-0.194	-0.2203	No
79	Map4k1	8832	-0.205	-0.2235	No
80	Csk	9157	-0.227	-0.2427	Yes
81	Abce1	9162	-0.228	-0.2359	Yes
82	H2-Ob	9279	-0.237	-0.2379	Yes
83	Icam1	9381	-0.246	-0.2385	Yes
84	Nme1	9391	-0.247	-0.2315	Yes
85	C2	9549	-0.261	-0.2361	Yes
86	Spi1	9625	-0.268	-0.2339	Yes
87	Ly86	9693	-0.273	-0.2308	Yes
88	St8sia4	9868	-0.288	-0.2359	Yes
89	Mrpl3	9992	-0.300	-0.2366	Yes
90	Tapbp	10009	-0.301	-0.2285	Yes
91	Gcnt1	10148	-0.312	-0.2300	Yes
92	Abi1	10168	-0.313	-0.2217	Yes
93	Il18	10413	-0.337	-0.2310	Yes
94	Lyn	10418	-0.338	-0.2208	Yes
95	Ccr5	10510	-0.349	-0.2173	Yes
96	Hdac9	10521	-0.351	-0.2072	Yes
97	Rpl9	10583	-0.357	-0.2010	Yes
98	Itgal	10651	-0.367	-0.1950	Yes
99	Eif5a	10652	-0.367	-0.1836	Yes
100	Ifngr2	10653	-0.367	-0.1722	Yes
101	Il4ra	10831	-0.388	-0.1744	Yes
102	Il12a	10875	-0.394	-0.1657	Yes
103	F2r	11013	-0.412	-0.1639	Yes
104	Eif3j1	11223	-0.442	-0.1671	Yes
105	Cd86	11541	-0.501	-0.1772	Yes
106	Was	11758	-0.546	-0.1777	Yes
107	Traf2	11812	-0.565	-0.1644	Yes
108	Tpd52	11873	-0.583	-0.1511	Yes
109	B2m	11885	-0.587	-0.1337	Yes
110	Ccnd3	12090	-0.661	-0.1297	Yes
111	Rps3a1	12146	-0.694	-0.1125	Yes
112	Rps9	12279	-0.796	-0.0984	Yes
113	Ifnar2	12285	-0.801	-0.0739	Yes
114	Fcgr2b	12351	-0.879	-0.0518	Yes
115	Bcl10	12375	-0.930	-0.0247	Yes
116	Eif3d	12388	-0.961	0.0043	Yes