Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group4.Mast_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ADIPOGENESIS
Enrichment Score (ES)	-0.33240378
Normalized Enrichment Score (NES)	-1.4730711
Nominal p-value	0.015564202
FDR q-value	0.17263238
FWER p-Value	0.348

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Preb	55	0.877	0.0151	No
2	Phyh	244	0.671	0.0147	No
3	Pex14	250	0.668	0.0292	No
4	G3bp2	342	0.626	0.0358	No
5	Qdpr	366	0.617	0.0476	No
6	Atl2	592	0.539	0.0413	No
7	Ndufab1	1137	0.413	0.0062	No
8	Ubqln1	1362	0.377	-0.0036	No
9	Angptl4	1643	0.337	-0.0189	No
10	Miga2	1665	0.336	-0.0131	No
11	Nabp1	1680	0.334	-0.0068	No
12	Aplp2	1686	0.333	0.0002	No
13	Bcl6	1765	0.325	0.0011	No
14	Sod1	1771	0.325	0.0080	No
15	Dld	1873	0.313	0.0067	No
16	Dlat	1909	0.308	0.0107	No
17	Ccng2	1955	0.303	0.0138	No
18	Agpat3	2105	0.287	0.0081	No
19	Ppp1r15b	2142	0.283	0.0115	No
20	Mgst3	2229	0.275	0.0106	No
21	Fah	2240	0.274	0.0159	No
22	Adcy6	2302	0.269	0.0169	No
23	Slc27a1	2355	0.263	0.0185	No
24	Acadm	2454	0.252	0.0162	No
25	Pemt	2559	0.243	0.0131	No
26	Rmdn3	2647	0.235	0.0113	No
27	Mgll	2678	0.233	0.0140	No
28	Tob1	2864	0.214	0.0038	No
29	Ptcd3	2948	0.205	0.0016	No
30	Riok3	3063	0.195	-0.0033	No
31	Slc5a6	3084	0.193	-0.0007	No
32	Phldb1	3213	0.183	-0.0070	No
33	Cat	3259	0.180	-0.0066	No
34	Dnajb9	3392	0.170	-0.0136	No
35	Stom	3408	0.168	-0.0111	No
36	Map4k3	3430	0.166	-0.0091	No
37	Jagn1	3667	0.148	-0.0250	No
38	Ak2	3684	0.147	-0.0230	No
39	Decr1	3746	0.142	-0.0248	No
40	Cpt2	3779	0.140	-0.0243	No
41	Aldoa	3987	0.122	-0.0384	No
42	Reep5	4194	0.109	-0.0528	No
43	Dgat1	4221	0.108	-0.0525	No
44	Pfkfb3	4234	0.106	-0.0511	No
45	Uqcr10	4309	0.101	-0.0549	No
46	Coq9	4505	0.086	-0.0688	No
47	Ywhag	4867	0.059	-0.0969	No
48	Samm50	4884	0.058	-0.0969	No
49	Ppm1b	4892	0.057	-0.0962	No
50	Gpd2	5016	0.050	-0.1051	No
51	Mtarc2	5085	0.046	-0.1096	No
52	Slc25a10	5214	0.036	-0.1192	No
53	Suclg1	5351	0.026	-0.1297	No
54	Acly	5490	0.017	-0.1406	No
55	Ifngr1	5532	0.015	-0.1436	No
56	Pdcd4	5618	0.009	-0.1503	No
57	Ucp2	5623	0.009	-0.1504	No
58	Baz2a	5646	0.007	-0.1520	No
59	Uck1	5742	0.000	-0.1598	No
60	Etfb	5873	-0.006	-0.1702	No
61	Gpx4	5921	-0.010	-0.1738	No
62	Cdkn2c	5974	-0.013	-0.1778	No
63	Slc19a1	6115	-0.021	-0.1887	No
64	Grpel1	6215	-0.027	-0.1961	No
65	Cavin1	6261	-0.030	-0.1991	No
66	Uqcrq	6403	-0.040	-0.2097	No
67	Elmod3	6612	-0.053	-0.2255	No
68	Nkiras1	6669	-0.056	-0.2288	No
69	Mrpl15	6702	-0.057	-0.2301	No
70	Gpat4	6726	-0.059	-0.2307	No
71	Tank	6811	-0.065	-0.2361	No
72	Cd151	6832	-0.067	-0.2362	No
73	Vegfb	6972	-0.075	-0.2458	No
74	Esyt1	7028	-0.078	-0.2486	No
75	Chuk	7056	-0.080	-0.2490	No
76	Mccc1	7057	-0.080	-0.2472	No
77	Ech1	7120	-0.084	-0.2504	No
78	Dhrs7	7191	-0.090	-0.2540	No
79	Gbe1	7240	-0.094	-0.2559	No
80	Cox7b	7432	-0.106	-0.2691	No
81	Rnf11	7525	-0.112	-0.2740	No
82	Dbt	7552	-0.114	-0.2736	No
83	Sorbs1	7606	-0.118	-0.2753	No
84	Rreb1	7693	-0.124	-0.2795	No
85	Scarb1	7859	-0.135	-0.2900	No
86	Itsn1	8035	-0.147	-0.3009	No
87	Lipe	8071	-0.149	-0.3005	No
88	Por	8101	-0.152	-0.2994	No
89	Lpcat3	8152	-0.155	-0.3001	No
90	C3	8158	-0.155	-0.2970	No
91	Plin2	8272	-0.163	-0.3026	No
92	Sdhb	8433	-0.174	-0.3117	No
93	Abcb8	8465	-0.176	-0.3103	No
94	Ghitm	8605	-0.187	-0.3175	No
95	Cs	8664	-0.191	-0.3179	No
96	Itih5	8665	-0.191	-0.3137	No
97	Uqcrc1	8718	-0.195	-0.3135	No
98	Pim3	8762	-0.199	-0.3126	No
99	Rtn3	8829	-0.205	-0.3134	No
100	Dhcr7	8887	-0.209	-0.3134	No
101	Aco2	8915	-0.211	-0.3109	No
102	Bcl2l13	8998	-0.216	-0.3128	No
103	Gpam	9069	-0.221	-0.3135	No
104	Tkt	9110	-0.224	-0.3118	No
105	Elovl6	9126	-0.226	-0.3080	No
106	Pgm1	9211	-0.231	-0.3097	No
107	Esrra	9270	-0.236	-0.3091	No
108	Cmpk1	9557	-0.262	-0.3266	Yes
109	Ndufb7	9560	-0.262	-0.3209	Yes
110	Idh3a	9581	-0.263	-0.3167	Yes
111	Dram2	9692	-0.273	-0.3195	Yes
112	Acadl	9708	-0.274	-0.3146	Yes
113	Adipor2	9816	-0.284	-0.3170	Yes
114	Dnajc15	9969	-0.298	-0.3228	Yes
115	Prdx3	10059	-0.306	-0.3232	Yes
116	Angpt1	10129	-0.310	-0.3219	Yes
117	Apoe	10162	-0.313	-0.3175	Yes
118	Idh3g	10163	-0.313	-0.3105	Yes
119	Cyc1	10259	-0.322	-0.3111	Yes
120	Retsat	10305	-0.326	-0.3075	Yes
121	Bckdha	10332	-0.329	-0.3023	Yes
122	Crat	10336	-0.330	-0.2952	Yes
123	Dhrs7b	10371	-0.334	-0.2905	Yes
124	Slc25a1	10490	-0.346	-0.2924	Yes
125	Sdhc	10567	-0.355	-0.2907	Yes
126	Immt	10600	-0.361	-0.2852	Yes
127	Acox1	10685	-0.370	-0.2838	Yes
128	Pfkl	10751	-0.378	-0.2807	Yes
129	Nmt1	10804	-0.385	-0.2764	Yes
130	Acads	10820	-0.387	-0.2690	Yes
131	Echs1	10896	-0.396	-0.2662	Yes
132	Abca1	11040	-0.416	-0.2686	Yes
133	Arl4a	11089	-0.421	-0.2631	Yes
134	Atp1b3	11157	-0.430	-0.2590	Yes
135	Slc1a5	11214	-0.440	-0.2538	Yes
136	Ubc	11339	-0.463	-0.2535	Yes
137	Uqcr11	11364	-0.466	-0.2451	Yes
138	Cox8a	11430	-0.481	-0.2397	Yes
139	Coq5	11433	-0.481	-0.2291	Yes
140	Ptger3	11518	-0.496	-0.2249	Yes
141	Scp2	11522	-0.498	-0.2140	Yes
142	Aldh2	11567	-0.506	-0.2063	Yes
143	Mtch2	11612	-0.514	-0.1985	Yes
144	Cox6a1	11687	-0.531	-0.1927	Yes
145	Mdh2	11772	-0.552	-0.1872	Yes
146	Coq3	11802	-0.563	-0.1770	Yes
147	Hibch	11915	-0.598	-0.1728	Yes
148	Araf	11942	-0.607	-0.1614	Yes
149	Idh1	11973	-0.617	-0.1501	Yes
150	Ndufa5	11978	-0.619	-0.1366	Yes
151	Gphn	12071	-0.649	-0.1296	Yes
152	Ndufs3	12074	-0.651	-0.1153	Yes
153	Aifm1	12084	-0.657	-0.1013	Yes
154	Ddt	12140	-0.691	-0.0904	Yes
155	Stat5a	12288	-0.806	-0.0844	Yes
156	Gadd45a	12321	-0.845	-0.0682	Yes
157	Hadh	12405	-1.025	-0.0521	Yes
158	Taldo1	12408	-1.040	-0.0291	Yes
159	Acaa2	12438	-1.422	0.0002	Yes