DatasetMast.Mast_Pheno.cls
#Group1_versus_Group3.Mast_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeMast_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class0
GeneSetHALLMARK_PROTEIN_SECRETION
Enrichment Score (ES)0.18044096
Normalized Enrichment Score (NES)0.7957692
Nominal p-value0.9063745
FDR q-value0.95602757
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PROTEIN_SECRETION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Arfgef21410.7510.0207Yes
2Tmed102170.6980.0445Yes
3Uso12230.6950.0738Yes
4Cln53150.6360.0937Yes
5Clta3910.6030.1134Yes
6Ctsc7160.5050.1087Yes
7Sec24d7570.4930.1266Yes
8Rab5a8770.4640.1368Yes
9Arf112090.4020.1272Yes
10Cltc12600.3940.1400Yes
11Gbf115410.3530.1324Yes
12Pam15660.3490.1454Yes
13Rps6ka316170.3450.1561Yes
14Stx716370.3410.1691Yes
15Atp7a17080.3320.1777Yes
16Galc19320.3060.1727Yes
17Sec31a19970.3020.1804Yes
18Vamp325370.2510.1475No
19Clcn327190.2350.1429No
20Atp1a127410.2330.1512No
21Ppt127550.2310.1600No
22Zw1028950.2180.1581No
23M6pr30510.2050.1543No
24Copb231370.1980.1559No
25Yipf631820.1940.1606No
26Anp32e33180.1830.1575No
27Tom1l136360.1570.1386No
28Snap2338540.1390.1270No
29Lamp239700.1290.1232No
30Mapk144120.1000.0918No
31Copb144750.0960.0909No
32Cog245660.0880.0874No
33Adam1046430.0820.0847No
34Rab22a46640.0810.0866No
35Cd6347190.0770.0855No
36Dop1a47400.0760.0871No
37Rab1448710.0650.0794No
38Dst48800.0650.0815No
39Rab2a50490.0530.0702No
40Atp6v1h50700.0520.0708No
41Abca154540.0250.0409No
42Sod154680.0240.0408No
43Stx1254920.0220.0399No
44Ap3b156110.0150.0310No
45Arcn15901-0.0020.0077No
46Ap2b15947-0.0060.0043No
47Ap3s16097-0.017-0.0070No
48Tmx16286-0.031-0.0209No
49Napa6547-0.047-0.0399No
50Rab96796-0.064-0.0572No
51Vamp46912-0.071-0.0635No
52Snx26952-0.074-0.0635No
53Igf2r7360-0.101-0.0921No
54Scamp37374-0.102-0.0888No
55Ap2s17398-0.103-0.0863No
56Golga47514-0.111-0.0908No
57Ap1g17632-0.119-0.0952No
58Vps457737-0.126-0.0982No
59Mon27808-0.131-0.0983No
60Rer17911-0.139-0.1006No
61Ocrl8873-0.209-0.1695No
62Ap2m18887-0.210-0.1616No
63Dnm1l8902-0.211-0.1537No
64Arfgap38992-0.216-0.1516No
65Ergic39003-0.218-0.1431No
66Sec22b9066-0.223-0.1386No
67Scamp19147-0.229-0.1353No
68Sgms19298-0.240-0.1372No
69Arfgef19347-0.245-0.1306No
70Ica19433-0.251-0.1267No
71Vps4b9674-0.271-0.1346No
72Arfip19886-0.290-0.1393No
73Cope9970-0.298-0.1332No
74Stx1610429-0.340-0.1558No
75Ykt610504-0.348-0.1469No
76Tpd5210914-0.396-0.1630No
77Krt1810953-0.401-0.1490No
78Gla11063-0.415-0.1400No
79Gosr211109-0.423-0.1256No
80Gnas11188-0.434-0.1133No
81Stam11257-0.446-0.0998No
82Tsg10111434-0.473-0.0938No
83Kif1b11706-0.532-0.0930No
84Napg12074-0.658-0.0946No
85Bnip312340-0.869-0.0789No
86Lman112392-0.978-0.0412No
87Bet112413-1.0540.0023No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PROTEIN_SECRETION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PROTEIN_SECRETION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PROTEIN_SECRETION